RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 PSMG3Q9BT73 122 aaPredicted RBP5.35□□□□□ -1.55
HDAC3-209ENST00000486618 SLC25A39Q9BZJ4 359 aaPredicted RBP5.35□□□□□ -1.55
HDAC3-209ENST00000486618 PNRC2Q9NPJ4 139 aaKnown RBP5.35□□□□□ -1.55
HDAC3-209ENST00000486618 THYN1Q9P016 225 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 RAB22AQ9UL26 194 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 SIGLEC7Q9Y286 467 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 ENPP4Q9Y6X5 453 aa5.35□□□□□ -1.55
HDAC3-209ENST00000486618 STAB2Q8WWQ8 2551 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 A6NDX4 124 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 FAM90A26D6RGX4 464 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 HSD17B6O14756 317 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 FFAR1O14842 300 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 RBFOX2O43251 390 aaKnown RBP eCLIP5.34□□□□□ -1.55
HDAC3-209ENST00000486618 MMP23AO75900 390 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 OXTP01178 125 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 HBZP02008 142 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 FABP3P05413 133 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 ESDP10768 282 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 GABRA2P47869 451 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 NCS1P62166 190 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 RPS28P62857 69 aaKnown RBP5.34□□□□□ -1.55
HDAC3-209ENST00000486618 UBE2V2Q15819 145 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 LDLRAD2Q5SZI1 272 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 OR10K2Q6IF99 312 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 WDR86Q86TI4 376 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 MKXQ8IYA7 352 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 OR5A2Q8NGI9 324 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 OR4K13Q8NH42 304 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 ZNF502Q8TBZ5 544 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 PCNPQ8WW12 178 aaKnown RBP5.34□□□□□ -1.55
HDAC3-209ENST00000486618 PTX4Q96A99 478 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 BORCS7Q96B45 105 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 ISOC1Q96CN7 298 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 MALSU1Q96EH3 234 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 GAFA1Q96PS6 74 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 PRR25Q96S07 402 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 NMNAT3Q96T66 252 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 RTL8AQ9BWD3 113 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 TMEM59Q9BXS4 323 aa5.34□□□□□ -1.55
HDAC3-209ENST00000486618 RBFOX1Q9NWB1 397 aaKnown RBP5.34□□□□□ -1.55
HDAC3-209ENST00000486618 SIRT4Q9Y6E7 314 aaPredicted RBP5.34□□□□□ -1.55
HDAC3-209ENST00000486618 TENM2Q9NT68 2774 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 OR5B21A6NL26 309 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 C15orf61A6NNL5 157 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 CCL25O15444 150 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 UCHL1P09936 223 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 OR5AL1P0C617 328 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 CT45A6P0DMU7 189 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 CT45A5P0DMU8 189 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 CT45A7P0DMV0 189 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 AZU1P20160 251 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 NPY1RP25929 384 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 ETV6P41212 452 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 RFX2P48378 723 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 SLC25A1P53007 311 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 GRB2P62993 217 aaKnown RBP5.33□□□□□ -1.56
HDAC3-209ENST00000486618 RPL24P83731 157 aaKnown RBP5.33□□□□□ -1.56
HDAC3-209ENST00000486618 RAB40BQ12829 278 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 OR5I1Q13606 314 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 OPCMLQ14982 345 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 SSX1Q16384 188 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 IAH1Q2TAA2 248 aaPredicted RBP5.33□□□□□ -1.56
HDAC3-209ENST00000486618 ACOT6Q3I5F7 207 aaPredicted RBP5.33□□□□□ -1.56
HDAC3-209ENST00000486618 CT45A1Q5HYN5 189 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 C8orf82Q6P1X6 216 aaPredicted RBP5.33□□□□□ -1.56
HDAC3-209ENST00000486618 SFXN4Q6P4A7 337 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 Q6ZRG5 221 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 Q6ZRM9 215 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 TMEM219Q86XT9 240 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 LINC00471Q8N535 108 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 C15orf54Q8N8G6 183 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 OR4X2Q8NGF9 303 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 OR5A1Q8NGJ0 315 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 OR51A2Q8NGJ7 313 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 OR6F1Q8NGZ6 308 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 CT45A3Q8NHU0 189 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 TP53RKQ96S44 253 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 LPAR5Q9H1C0 372 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 WDR13Q9H1Z4 485 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 OR52D1Q9H346 318 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 FBXL15Q9H469 300 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 GPR84Q9NQS5 396 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 LYRM2Q9NU23 88 aaPredicted RBP5.33□□□□□ -1.56
HDAC3-209ENST00000486618 Q9UF83 564 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 MPC1Q9Y5U8 109 aa5.33□□□□□ -1.56
HDAC3-209ENST00000486618 PNMA8CA0A1B0GUJ8 204 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 A0A1B0GV50 99 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 UBE2QL1A1L167 161 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 RIIAD1A6NNX1 92 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 SRRM4A7MD48 611 aaKnown RBP5.32□□□□□ -1.56
HDAC3-209ENST00000486618 LYRM9A8MSI8 78 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 INMT-MINDY4F8WBC2 141 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 FKBP6O75344 327 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 CDRT1O95170 752 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 PSG2P11465 335 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 RPL35AP18077 110 aaKnown RBP5.32□□□□□ -1.56
HDAC3-209ENST00000486618 COX7A1P24310 79 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 CRHBPP24387 322 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 AMTP48728 403 aa5.32□□□□□ -1.56
HDAC3-209ENST00000486618 DYNLT3P51808 116 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms