RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 RHOBP62745 196 aa17.14■□□□□ 0.34
TRADD-202ENST00000486556 DEFA5Q01523 94 aa17.14■□□□□ 0.34
TRADD-202ENST00000486556 BTN1A1Q13410 526 aa17.14■□□□□ 0.34
TRADD-202ENST00000486556 CYP2G1PQ6ZSU1 146 aa17.14■□□□□ 0.34
TRADD-202ENST00000486556 TTC9CQ8N5M4 171 aa17.14■□□□□ 0.34
TRADD-202ENST00000486556 IGHV7-81A0A0B4J1V7 117 aa17.14■□□□□ 0.33
TRADD-202ENST00000486556 LOC102723971A0A1B0GUV8 181 aa17.14■□□□□ 0.33
TRADD-202ENST00000486556 MT-CO2P00403 227 aa17.14■□□□□ 0.33
TRADD-202ENST00000486556 BCL2P10415 239 aa17.14■□□□□ 0.33
TRADD-202ENST00000486556 ICAM4Q14773 271 aa17.14■□□□□ 0.33
TRADD-202ENST00000486556 SLC35E3Q7Z769 313 aa17.14■□□□□ 0.33
TRADD-202ENST00000486556 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.14■□□□□ 0.33
TRADD-202ENST00000486556 FAM103A1Q9BTL3 118 aaKnown RBP17.14■□□□□ 0.33
TRADD-202ENST00000486556 DMRT1Q9Y5R6 373 aa17.14■□□□□ 0.33
TRADD-202ENST00000486556 VPS13CQ709C8 3753 aa17.14■□□□□ 0.33
TRADD-202ENST00000486556 TCRBV4S1A1TA0A5B7 111 aa17.13■□□□□ 0.33
TRADD-202ENST00000486556 TGFAP01135 160 aa17.13■□□□□ 0.33
TRADD-202ENST00000486556 PSMB3P49720 205 aa17.13■□□□□ 0.33
TRADD-202ENST00000486556 RND2P52198 227 aa17.13■□□□□ 0.33
TRADD-202ENST00000486556 PIFOQ8TCI5 191 aa17.13■□□□□ 0.33
TRADD-202ENST00000486556 RBM14Q96PK6 669 aaKnown RBP17.13■□□□□ 0.33
TRADD-202ENST00000486556 ZFP92A6NM28 416 aa17.12■□□□□ 0.33
TRADD-202ENST00000486556 HMGB3O15347 200 aaKnown RBP17.12■□□□□ 0.33
TRADD-202ENST00000486556 AVPP01185 164 aa17.12■□□□□ 0.33
TRADD-202ENST00000486556 FBP1P09467 338 aa17.12■□□□□ 0.33
TRADD-202ENST00000486556 STAG3L2P0CL84 134 aa17.12■□□□□ 0.33
TRADD-202ENST00000486556 STAG3L3P0CL85 134 aa17.12■□□□□ 0.33
TRADD-202ENST00000486556 KLF17Q5JT82 389 aaPredicted RBP17.12■□□□□ 0.33
TRADD-202ENST00000486556 VAX2Q9UIW0 290 aa17.12■□□□□ 0.33
TRADD-202ENST00000486556 I3L2K1 104 aa17.12■□□□□ 0.33
TRADD-202ENST00000486556 C19orf35Q6ZS72 473 aa17.12■□□□□ 0.33
TRADD-202ENST00000486556 MANBALQ9NQG1 85 aa17.12■□□□□ 0.33
TRADD-202ENST00000486556 MRPL36Q9P0J6 103 aaKnown RBP17.12■□□□□ 0.33
TRADD-202ENST00000486556 IGKV1D-37A0A075B6S9 117 aa17.11■□□□□ 0.33
TRADD-202ENST00000486556 SRP19P09132 144 aaKnown RBP17.11■□□□□ 0.33
TRADD-202ENST00000486556 NDPQ00604 133 aa17.11■□□□□ 0.33
TRADD-202ENST00000486556 ASPHD1Q5U4P2 390 aa17.11■□□□□ 0.33
TRADD-202ENST00000486556 NANPQ8TBE9 248 aa17.11■□□□□ 0.33
TRADD-202ENST00000486556 RXFP4Q8TDU9 374 aa17.11■□□□□ 0.33
TRADD-202ENST00000486556 TRGV9Q99603 122 aa17.11■□□□□ 0.33
TRADD-202ENST00000486556 SSX3Q99909 188 aa17.11■□□□□ 0.33
TRADD-202ENST00000486556 NAV3Q8IVL0 2385 aa17.11■□□□□ 0.33
TRADD-202ENST00000486556 NDUFS6O75380 124 aaKnown RBP17.1■□□□□ 0.33
TRADD-202ENST00000486556 CXorf1O96002 111 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 IGHV3-48P01763 117 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 OR4X1Q8NH49 305 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 GATAD1Q8WUU5 269 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 TMEM68Q96MH6 324 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 RNF2Q99496 336 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 CELSR2Q9HCU4 2923 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 SEPSECSQ9HD40 501 aaKnown RBP17.1■□□□□ 0.33
TRADD-202ENST00000486556 MOB4Q9Y3A3 225 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 ANKRD17O75179 2603 aaKnown RBP17.1■□□□□ 0.33
TRADD-202ENST00000486556 EIF3GO75821 320 aaKnown RBP eCLIP17.1■□□□□ 0.33
TRADD-202ENST00000486556 SNAPINO95295 136 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 IGHV4-31P0DP07 118 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 EGR2P11161 476 aaPredicted RBP17.1■□□□□ 0.33
TRADD-202ENST00000486556 GATA2P23769 480 aaPredicted RBP17.1■□□□□ 0.33
TRADD-202ENST00000486556 GUCA2BQ16661 112 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 C5orf56Q8N8D9 126 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 SGMS2Q8NHU3 365 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 Q96MF0 132 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 TMPRSS5Q9H3S3 457 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 TNFRSF19Q9NS68 423 aa17.1■□□□□ 0.33
TRADD-202ENST00000486556 SOHLH1Q5JUK2 328 aa17.09■□□□□ 0.33
TRADD-202ENST00000486556 THYN1Q9P016 225 aa17.09■□□□□ 0.33
TRADD-202ENST00000486556 FAM78BQ5VT40 261 aa17.08■□□□□ 0.33
TRADD-202ENST00000486556 ATRAIDQ6UW56 229 aa17.08■□□□□ 0.33
TRADD-202ENST00000486556 MAPK1IP1LQ8NDC0 245 aa17.08■□□□□ 0.33
TRADD-202ENST00000486556 OR1L4Q8NGR5 311 aa17.08■□□□□ 0.33
TRADD-202ENST00000486556 DNAJC4Q9NNZ3 241 aa17.08■□□□□ 0.33
TRADD-202ENST00000486556 FUT9Q9Y231 359 aa17.08■□□□□ 0.33
TRADD-202ENST00000486556 PTPN13Q12923 2485 aa17.08■□□□□ 0.32
TRADD-202ENST00000486556 IGLV11-55A0A075B6I3 123 aa17.07■□□□□ 0.32
TRADD-202ENST00000486556 K7EIM0 57 aa17.07■□□□□ 0.32
TRADD-202ENST00000486556 OR5G3P0C626 314 aa17.07■□□□□ 0.32
TRADD-202ENST00000486556 ZNF90Q03938 601 aa17.07■□□□□ 0.32
TRADD-202ENST00000486556 KRTAP1-3Q8IUG1 177 aa17.07■□□□□ 0.32
TRADD-202ENST00000486556 PFDN5Q99471 154 aa17.07■□□□□ 0.32
TRADD-202ENST00000486556 HSPB9Q9BQS6 159 aa17.07■□□□□ 0.32
TRADD-202ENST00000486556 NKX6-2Q9C056 277 aaPredicted RBP17.07■□□□□ 0.32
TRADD-202ENST00000486556 PSMB11A5LHX3 300 aa17.07■□□□□ 0.32
TRADD-202ENST00000486556 SPNS3Q6ZMD2 512 aa17.07■□□□□ 0.32
TRADD-202ENST00000486556 FANCD2OSQ96PS1 177 aa17.07■□□□□ 0.32
TRADD-202ENST00000486556 MRPL32Q9BYC8 188 aaKnown RBP17.07■□□□□ 0.32
TRADD-202ENST00000486556 PITPNC1Q9UKF7 332 aa17.07■□□□□ 0.32
TRADD-202ENST00000486556 MEF2BQ02080 365 aaPredicted RBP17.06■□□□□ 0.32
TRADD-202ENST00000486556 HIST2H2BCQ6DN03 193 aa17.06■□□□□ 0.32
TRADD-202ENST00000486556 IQCF2Q8IXL9 164 aa17.06■□□□□ 0.32
TRADD-202ENST00000486556 TMEM37Q8WXS4 190 aa17.06■□□□□ 0.32
TRADD-202ENST00000486556 TECRQ9NZ01 308 aaKnown RBP17.06■□□□□ 0.32
TRADD-202ENST00000486556 ELOA3CA0A087WX78 387 aaPredicted RBP17.05■□□□□ 0.32
TRADD-202ENST00000486556 IGHV3-21A0A0B4J1V1 117 aa17.05■□□□□ 0.32
TRADD-202ENST00000486556 TSPAN4O14817 238 aa17.05■□□□□ 0.32
TRADD-202ENST00000486556 ARL14EPLP0DKL9 152 aa17.05■□□□□ 0.32
TRADD-202ENST00000486556 HIST1H1BP16401 226 aaKnown RBP17.05■□□□□ 0.32
TRADD-202ENST00000486556 TAS2R45P59539 299 aa17.05■□□□□ 0.32
TRADD-202ENST00000486556 KLK9Q2XQG4 91 aa17.05■□□□□ 0.32
TRADD-202ENST00000486556 AKIRIN2Q53H80 203 aa17.05■□□□□ 0.32
TRADD-202ENST00000486556 KLK9Q9UKQ9 250 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms