RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SLC25A33Q9BSK2 321 aa9.54□□□□□ -0.88
PKP4-213ENST00000486254 DNAJC4Q9NNZ3 241 aa9.54□□□□□ -0.88
PKP4-213ENST00000486254 LY96Q9Y6Y9 160 aa9.54□□□□□ -0.88
PKP4-213ENST00000486254 CACNA1BQ00975 2339 aa9.54□□□□□ -0.88
PKP4-213ENST00000486254 RELNP78509 3460 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 SMG1Q96Q15 3661 aaKnown RBP9.53□□□□□ -0.88
PKP4-213ENST00000486254 WNK2Q9Y3S1 2297 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 A0A1W2PRE2 83 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 VWC2LB2RUY7 222 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 TOX4O94842 621 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 CTRB1P17538 263 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 AKR1C3P42330 323 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 MFAP2P55001 183 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 RAB5BP61020 215 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 PLGLAQ15195 96 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 CTRB2Q6GPI1 263 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 ZNF562Q6V9R5 426 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 LHFPL4Q7Z7J7 247 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 IQCF2Q8IXL9 164 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 STXBP6Q8NFX7 210 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 OR2T6Q8NHC8 308 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 NPIPB3Q92617 1050 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 ANAPC16Q96DE5 110 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 ACY3Q96HD9 319 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 ZNF48Q96MX3 618 aaPredicted RBP9.53□□□□□ -0.88
PKP4-213ENST00000486254 TBX15Q96SF7 602 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 CCL19Q99731 98 aa9.53□□□□□ -0.88
PKP4-213ENST00000486254 NPIPB5A8MRT5 1133 aa9.52□□□□□ -0.89
PKP4-213ENST00000486254 RPL23P62829 140 aaKnown RBP9.52□□□□□ -0.89
PKP4-213ENST00000486254 KLK9Q2XQG4 91 aa9.52□□□□□ -0.89
PKP4-213ENST00000486254 AKIRIN2Q53H80 203 aa9.52□□□□□ -0.89
PKP4-213ENST00000486254 MIR17HGQ75NE6 70 aa9.52□□□□□ -0.89
PKP4-213ENST00000486254 OR4X1Q8NH49 305 aa9.52□□□□□ -0.89
PKP4-213ENST00000486254 C10orf105Q8TEF2 133 aa9.52□□□□□ -0.89
PKP4-213ENST00000486254 RPUSD4Q96CM3 377 aaKnown RBP9.52□□□□□ -0.89
PKP4-213ENST00000486254 UHRF2Q96PU4 802 aa9.52□□□□□ -0.89
PKP4-213ENST00000486254 C1RLQ9NZP8 487 aa9.52□□□□□ -0.89
PKP4-213ENST00000486254 KLK9Q9UKQ9 250 aa9.52□□□□□ -0.89
PKP4-213ENST00000486254 HILPDAQ9Y5L2 63 aa9.52□□□□□ -0.89
PKP4-213ENST00000486254 TRBV24-1A0A075B6N3 115 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 C1orf196B1AJZ1 125 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 C9JCJ5 164 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 I3L2K1 104 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 EIF3GO75821 320 aaKnown RBP eCLIP9.51□□□□□ -0.89
PKP4-213ENST00000486254 FABP1P07148 127 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 NPPCP23582 126 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 BRS3P32247 399 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 ATP5G3P48201 142 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 DSCR9P59020 149 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 GNB1P62873 340 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 LCN2P80188 198 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 PAX8Q06710 450 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 ELOBQ15370 118 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 MLANAQ16655 118 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 SPATA31B1PQ5VZV4 182 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 CST9LP1Q5W188 147 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 TMEM37Q8WXS4 190 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 FAM168AQ92567 244 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 ISOC2Q96AB3 205 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 FAM167A-AS1Q96KT0 104 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 TNFRSF19Q9NS68 423 aa9.51□□□□□ -0.89
PKP4-213ENST00000486254 SPTAN1Q13813 2472 aaKnown RBP9.51□□□□□ -0.89
PKP4-213ENST00000486254 COX7A2P2O60397 106 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 FAM106CPP0CH98 169 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 PRB3Q04118 309 aaPredicted RBP9.5□□□□□ -0.89
PKP4-213ENST00000486254 C10orf113Q5VZT2 155 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 FAM24BQ8N5W8 94 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 ZNF503Q96F45 646 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 MISP3Q96FF7 219 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 AJUBAQ96IF1 538 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 YTHDF2Q9Y5A9 579 aaKnown RBP9.5□□□□□ -0.89
PKP4-213ENST00000486254 USP9XQ93008 2570 aaPredicted RBP9.5□□□□□ -0.89
PKP4-213ENST00000486254 AKAP6Q13023 2319 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 FCN1O00602 326 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 PPP1R2P9O14990 202 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 CNIH1O95406 144 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 HLA-DRB1P01911 266 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 REG1AP05451 166 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 UBE2G2P60604 165 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 FXYD3Q14802 87 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 ADIRFQ15847 76 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 CLEC2AQ6UVW9 174 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 LINC01551Q86U37 167 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 PERPQ96FX8 193 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 BTF3L4Q96K17 158 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 IMMP2LQ96T52 175 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 PYGO2Q9BRQ0 406 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 BIN3Q9NQY0 253 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 MRPL36Q9P0J6 103 aaKnown RBP9.5□□□□□ -0.89
PKP4-213ENST00000486254 DMRT1Q9Y5R6 373 aa9.5□□□□□ -0.89
PKP4-213ENST00000486254 LRBAP50851 2863 aa9.49□□□□□ -0.89
PKP4-213ENST00000486254 OR7C2O60412 319 aa9.49□□□□□ -0.89
PKP4-213ENST00000486254 NDUFB4O95168 129 aa9.49□□□□□ -0.89
PKP4-213ENST00000486254 IGLC1P0CG04 106 aa9.49□□□□□ -0.89
PKP4-213ENST00000486254 HES1Q14469 280 aa9.49□□□□□ -0.89
PKP4-213ENST00000486254 ZNF674Q2M3X9 581 aa9.49□□□□□ -0.89
PKP4-213ENST00000486254 DYNAPQ8N1N2 210 aa9.49□□□□□ -0.89
PKP4-213ENST00000486254 TTC9CQ8N5M4 171 aa9.49□□□□□ -0.89
PKP4-213ENST00000486254 OR51G1Q8NGK1 321 aa9.49□□□□□ -0.89
PKP4-213ENST00000486254 ARPC1AQ92747 370 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms