RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 HRASLSQ9HDD0 168 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 POMPQ9Y244 141 aa4.53□□□□□ -1.68
SMC4-217ENST00000485867 YTHDF2Q9Y5A9 579 aaKnown RBP4.53□□□□□ -1.68
SMC4-217ENST00000485867 LRP2P98164 4655 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 IGHV3OR16-12A0A075B7B8 117 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 A0A1W2PPQ1 181 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 SAC3D1A6NKF1 404 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 H3BMM0 161 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 UPK2O00526 184 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 IFNA5P01569 189 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 GNRHRP30968 328 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 LINC00315P59091 139 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 PSMG4Q5JS54 123 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 HSD17B13Q7Z5P4 300 aaPredicted RBP4.52□□□□□ -1.69
SMC4-217ENST00000485867 LRRTM1Q86UE6 522 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 ZNF485Q8NCK3 441 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 RHOXF1Q8NHV9 184 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 Q96MT0 163 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 TMEM231Q9H6L2 316 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 ZNF586Q9NXT0 402 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 SPATA2Q9UM82 520 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 KCNK7Q9Y2U2 307 aa4.52□□□□□ -1.69
SMC4-217ENST00000485867 PKHD1L1Q86WI1 4243 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 IGKV1D-8A0A087WSZ0 117 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 IGKV1D-13A0A0B4J2D9 117 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 PRYO14603 147 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 SLC22A5O76082 557 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 HLA-DQB1P01920 261 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 TRAPPC2P0DI81 140 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 TRAPPC2BP0DI82 140 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 IGKV1-13P0DP09 117 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 CD37P11049 281 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 MAPK3P27361 379 aaPredicted RBP4.51□□□□□ -1.69
SMC4-217ENST00000485867 MFAP4P55083 255 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 ERVFC1-1P60608 527 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 MRPS15P82914 257 aaKnown RBP4.51□□□□□ -1.69
SMC4-217ENST00000485867 INSL4Q14641 139 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 CLINT1Q14677 625 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 POU2AF1Q16633 256 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 OGFRL1Q5TC84 451 aaPredicted RBP4.51□□□□□ -1.69
SMC4-217ENST00000485867 DEFB104AQ8WTQ1 72 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 APH1BQ8WW43 257 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 TXN2Q99757 166 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 ZNF446Q9NWS9 450 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 TAS2R8Q9NYW2 309 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 CLEC2DQ9UHP7 191 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 OR2W1Q9Y3N9 320 aa4.51□□□□□ -1.69
SMC4-217ENST00000485867 hCG_2014768A0A024R1R8 64 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 TEX50A0A1B0GTY4 177 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 HELTA6NFD8 242 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 F5H768 121 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 I3L2K1 104 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 GNG7O60262 68 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 IGHV3-48P01763 117 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 HBE1P02100 147 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 DNAH10OSP0CZ25 163 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 FCGR1AP12314 374 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 HLA-DRB4P13762 266 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 NFYAP23511 347 aaPredicted RBP4.5□□□□□ -1.69
SMC4-217ENST00000485867 MT3P25713 68 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 P2RY1P47900 373 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 FXYD7P58549 80 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 DHRS2Q13268 280 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 RCN1Q15293 331 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 P2RY14Q15391 338 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 KCTD21Q4G0X4 260 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 RBM48Q5RL73 367 aaKnown RBP4.5□□□□□ -1.69
SMC4-217ENST00000485867 TMEM69Q5SWH9 247 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 Q6ZS49 121 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 OR56B1Q8NGI3 324 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 OR1L8Q8NGR8 309 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 PHYHIPQ92561 330 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 LSM10Q969L4 123 aaKnown RBP4.5□□□□□ -1.69
SMC4-217ENST00000485867 SLC25A46Q96AG3 418 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 CENPNQ96H22 339 aaPredicted RBP4.5□□□□□ -1.69
SMC4-217ENST00000485867 UPK3BQ9BT76 320 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 TMEM70Q9BUB7 260 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 HINT2Q9BX68 163 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 DCSTAMPQ9H295 470 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 SLC25A32Q9H2D1 315 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 NDUFA4L2Q9NRX3 87 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 AP4S1Q9Y587 144 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 ORC6Q9Y5N6 252 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 HLA-DRB4X5D2U9 266 aa4.5□□□□□ -1.69
SMC4-217ENST00000485867 DNAH8Q96JB1 4490 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 A0A1B0GU03 582 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 A0A1W2PS18 150 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 MFNGO00587 321 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 EI24O14681 340 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 RBFOX2O43251 390 aaKnown RBP eCLIP4.49□□□□□ -1.691e-7■■■□□ 15.2
SMC4-217ENST00000485867 WBP4O75554 376 aaKnown RBP4.49□□□□□ -1.69
SMC4-217ENST00000485867 OXTP01178 125 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 NQO2P16083 231 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 MYL12AP19105 171 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 NPPCP23582 126 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 TAS2R31P59538 309 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 RRN3P1Q2M238 152 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 ZNF600Q6ZNG1 722 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 SPAG16Q8N0X2 631 aa4.49□□□□□ -1.69
SMC4-217ENST00000485867 C1orf158Q8N1D5 194 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms