RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 GAR1Q9NY12 217 aaKnown RBP6.82□□□□□ -1.32
COL8A1-207ENST00000483969 PEMTQ9UBM1 199 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 CACNG5Q9UF02 275 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 FLVCR2Q9UPI3 526 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 TMED3Q9Y3Q3 217 aa6.82□□□□□ -1.32
COL8A1-207ENST00000483969 FAM240BA0A1B0GVZ2 78 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 C9orf170A2RU37 121 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 CORTO00230 105 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 SAP30O75446 220 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 OR2C1O95371 312 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 IFNA21P01568 189 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 TRBV12-3P01733 135 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 IGHV3-23P01764 117 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 TCRBP04435 133 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 OR4E1P0C645 316 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 SLC25A6P12236 298 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 GYPEP15421 78 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 ARL3P36405 182 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 HTR2BP41595 481 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 MFAP4P55083 255 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 SYNJ2BPP57105 145 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 EGFEM1PQ0D2K5 195 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 C4orf46Q504U0 113 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 PDLIM3Q53GG5 364 aaPredicted RBP6.81□□□□□ -1.32
COL8A1-207ENST00000483969 SPINK9Q5DT21 86 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 NMSQ5H8A3 153 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 PLET1Q6UQ28 207 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 GPHB5Q86YW7 130 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 OR9G4Q8NGQ1 327 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 OR1S1Q8NH92 325 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 ZNF502Q8TBZ5 544 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 SCARB1Q8WTV0 552 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 TXN2Q99757 166 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 C21orf62Q9NYP8 219 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 S4R3C0 116 aa6.81□□□□□ -1.32
COL8A1-207ENST00000483969 FBN3Q75N90 2809 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 MFSD2BA6NFX1 497 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 PPP5D1E7EU14 171 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 BMPR1BO00238 502 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 UPK1BO75841 260 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 HLA-AP01891 365 aaKnown RBP6.8□□□□□ -1.32
COL8A1-207ENST00000483969 HOXB5P09067 269 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 ANXA7P20073 488 aaKnown RBP6.8□□□□□ -1.32
COL8A1-207ENST00000483969 BTCP35070 178 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 MFAP2P55001 183 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 ATP5IP56385 69 aaPredicted RBP6.8□□□□□ -1.32
COL8A1-207ENST00000483969 ANKRD55Q3KP44 614 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 Q56UQ5 140 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 SPSB3Q6PJ21 355 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 LYG2Q86SG7 212 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 DUSP18Q8NEJ0 188 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 BSCL2Q96G97 398 aaPredicted RBP6.8□□□□□ -1.32
COL8A1-207ENST00000483969 PALMDQ9NP74 551 aa6.8□□□□□ -1.32
COL8A1-207ENST00000483969 IGHV3-21A0A0B4J1V1 117 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 RPS10-NUDT3A0A1W2PQS6 291 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 ZNF320A2RRD8 509 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 FAM90A26D6RGX4 464 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 I3L2K1 104 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 K7EIM0 57 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 LGALS9O00182 355 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 TGOLN2O43493 480 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 MED6O75586 246 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 LY86O95711 162 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 MT-CO2P00403 227 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 RNASE2P10153 161 aaKnown RBP6.79□□□□□ -1.32
COL8A1-207ENST00000483969 FCGR2BP31994 310 aaPredicted RBP6.79□□□□□ -1.32
COL8A1-207ENST00000483969 GPR183P32249 361 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 NPBWR1P48145 328 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 DEFA1P59665 94 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 DEFA3P59666 94 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 TNFRSF9Q07011 255 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 DHRS2Q13268 280 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 ASAH1Q13510 395 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 DCTN2Q13561 401 aaKnown RBP6.79□□□□□ -1.32
COL8A1-207ENST00000483969 C2orf83Q53S99 150 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 PVRIGQ6DKI7 326 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 UBAC2Q8NBM4 344 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 PINX1Q96BK5 328 aaKnown RBP6.79□□□□□ -1.32
COL8A1-207ENST00000483969 C20orf85Q9H1P6 137 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 SIGLEC8Q9NYZ4 499 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 HSPB7Q9UBY9 170 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 U3KQ87 197 aa6.79□□□□□ -1.32
COL8A1-207ENST00000483969 TRAV6A0A075B6T7 132 aa6.78□□□□□ -1.32
COL8A1-207ENST00000483969 OR2T8A6NH00 312 aa6.78□□□□□ -1.32
COL8A1-207ENST00000483969 NUPL2O15504 423 aaKnown RBP6.78□□□□□ -1.32
COL8A1-207ENST00000483969 PITX3O75364 302 aa6.78□□□□□ -1.32
COL8A1-207ENST00000483969 SCGB2A1O75556 95 aa6.78□□□□□ -1.32
COL8A1-207ENST00000483969 IFNA10P01566 189 aa6.78□□□□□ -1.32
COL8A1-207ENST00000483969 ELLP55199 621 aaPredicted RBP6.78□□□□□ -1.32
COL8A1-207ENST00000483969 KRTAP10-11P60412 298 aa6.78□□□□□ -1.32
COL8A1-207ENST00000483969 RPP30P78346 268 aaKnown RBP6.78□□□□□ -1.32
COL8A1-207ENST00000483969 RELQ04864 619 aaPredicted RBP6.78□□□□□ -1.32
COL8A1-207ENST00000483969 BSXQ3C1V8 233 aa6.78□□□□□ -1.32
COL8A1-207ENST00000483969 GGNBP1Q5YKI7 109 aa6.78□□□□□ -1.32
COL8A1-207ENST00000483969 ETFRF1Q6IPR1 90 aa6.78□□□□□ -1.32
COL8A1-207ENST00000483969 ENKURQ8TC29 256 aa6.78□□□□□ -1.32
COL8A1-207ENST00000483969 RNASEH2CQ8TDP1 164 aaKnown RBP6.78□□□□□ -1.32
COL8A1-207ENST00000483969 DTD1Q8TEA8 209 aa6.78□□□□□ -1.32
COL8A1-207ENST00000483969 MITD1Q8WV92 249 aa6.78□□□□□ -1.32
COL8A1-207ENST00000483969 RBKSQ9H477 322 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms