RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 ZFAND3Q9H8U3 227 aa8.09□□□□□ -1.11
TTC28-206ENST00000480563 PUS1Q9Y606 427 aaKnown RBP eCLIP8.09□□□□□ -1.11
TTC28-206ENST00000480563 AGRNO00468 2067 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 TRAV18A0A075B6X5 111 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 A0A0A6YYH2 397 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 A6NJ64 397 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 PGLYRP1O75594 196 aaPredicted RBP8.08□□□□□ -1.12
TTC28-206ENST00000480563 RLN1P04808 185 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 NPPCP23582 126 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 NPBWR1P48145 328 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 RORCP51449 518 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 RNF212Q495C1 297 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 UBE2NLQ5JXB2 153 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 MZT2AQ6P582 158 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 BORCS5Q969J3 196 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 FAM210BQ96KR6 192 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 RAB40CQ96S21 281 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 DIABLOQ9NR28 239 aa8.08□□□□□ -1.12
TTC28-206ENST00000480563 A0A1B0GU03 582 aa8.07□□□□□ -1.12
TTC28-206ENST00000480563 A0A1W2PS18 150 aa8.07□□□□□ -1.12
TTC28-206ENST00000480563 CCDC160A6NGH7 325 aa8.07□□□□□ -1.12
TTC28-206ENST00000480563 TMEM50AO95807 157 aa8.07□□□□□ -1.12
TTC28-206ENST00000480563 SPART-AS1P0CW21 52 aa8.07□□□□□ -1.12
TTC28-206ENST00000480563 TGFBR1P36897 503 aa8.07□□□□□ -1.12
TTC28-206ENST00000480563 RPS19P39019 145 aaKnown RBP8.07□□□□□ -1.12
TTC28-206ENST00000480563 TMBIM6P55061 237 aa8.07□□□□□ -1.12
TTC28-206ENST00000480563 HERV-K104P61576 105 aa8.07□□□□□ -1.12
TTC28-206ENST00000480563 Q8N1X5 172 aa8.07□□□□□ -1.12
TTC28-206ENST00000480563 ZNF114Q8NC26 417 aa8.07□□□□□ -1.12
TTC28-206ENST00000480563 OR5AP2Q8NGF4 316 aa8.07□□□□□ -1.12
TTC28-206ENST00000480563 TSC22D3Q99576 134 aa8.07□□□□□ -1.12
TTC28-206ENST00000480563 XCL2Q9UBD3 114 aa8.07□□□□□ -1.12
TTC28-206ENST00000480563 P2RY1P47900 373 aa8.06□□□□□ -1.12
TTC28-206ENST00000480563 EMP1P54849 157 aa8.06□□□□□ -1.12
TTC28-206ENST00000480563 TNP2Q05952 138 aa8.06□□□□□ -1.12
TTC28-206ENST00000480563 CTF1Q16619 201 aa8.06□□□□□ -1.12
TTC28-206ENST00000480563 SAMD12Q8N8I0 201 aa8.06□□□□□ -1.12
TTC28-206ENST00000480563 DCANP1Q8TF63 244 aa8.06□□□□□ -1.12
TTC28-206ENST00000480563 S100A16Q96FQ6 103 aaKnown RBP8.06□□□□□ -1.12
TTC28-206ENST00000480563 C1QTNF4Q9BXJ3 329 aa8.06□□□□□ -1.12
TTC28-206ENST00000480563 SMIM31A0A1B0GVY4 71 aa8.05□□□□□ -1.12
TTC28-206ENST00000480563 ZNF182P17025 639 aaPredicted RBP8.05□□□□□ -1.12
TTC28-206ENST00000480563 CRYBB3P26998 211 aa8.05□□□□□ -1.12
TTC28-206ENST00000480563 NUTF2P61970 127 aaKnown RBP8.05□□□□□ -1.12
TTC28-206ENST00000480563 ERHP84090 104 aaKnown RBP8.05□□□□□ -1.12
TTC28-206ENST00000480563 PRCDQ00LT1 54 aa8.05□□□□□ -1.12
TTC28-206ENST00000480563 PSMG4Q5JS54 123 aa8.05□□□□□ -1.12
TTC28-206ENST00000480563 TMEM69Q5SWH9 247 aa8.05□□□□□ -1.12
TTC28-206ENST00000480563 DHRS11Q6UWP2 260 aa8.05□□□□□ -1.12
TTC28-206ENST00000480563 CMTM1Q8IZ96 169 aa8.05□□□□□ -1.12
TTC28-206ENST00000480563 OR5H6Q8NGV6 325 aa8.05□□□□□ -1.12
TTC28-206ENST00000480563 OR4A16Q8NH70 328 aa8.05□□□□□ -1.12
TTC28-206ENST00000480563 METTL26Q96S19 204 aa8.05□□□□□ -1.12
TTC28-206ENST00000480563 NAA50Q9GZZ1 169 aaKnown RBP8.05□□□□□ -1.12
TTC28-206ENST00000480563 SCRT2Q9NQ03 307 aa8.05□□□□□ -1.12
TTC28-206ENST00000480563 HERC1Q15751 4861 aa8.05□□□□□ -1.12
TTC28-206ENST00000480563 TMEM189A5PLL7 270 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 FAM25AB3EWG3 89 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 FAM25CB3EWG5 89 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 FAM25GB3EWG6 89 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 APOA1P02647 267 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 CBX5P45973 191 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 PPP5CP53041 499 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 HSPE1P61604 102 aaKnown RBP8.04□□□□□ -1.12
TTC28-206ENST00000480563 DHRS2Q13268 280 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 TMEM230Q96A57 120 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 SLC25A38Q96DW6 304 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 NARS2Q96I59 477 aaKnown RBP8.04□□□□□ -1.12
TTC28-206ENST00000480563 NEU1Q99519 415 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 ZNF2Q9BSG1 426 aaPredicted RBP8.04□□□□□ -1.12
TTC28-206ENST00000480563 AUNIPQ9H7T9 357 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 EHFQ9NZC4 300 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 CCDC59Q9P031 241 aaKnown RBP8.04□□□□□ -1.12
TTC28-206ENST00000480563 COMMD3Q9UBI1 195 aa8.04□□□□□ -1.12
TTC28-206ENST00000480563 MEIS3P1A6NDR6 274 aa8.03□□□□□ -1.12
TTC28-206ENST00000480563 HELTA6NFD8 242 aa8.03□□□□□ -1.12
TTC28-206ENST00000480563 HTN3P15516 51 aa8.03□□□□□ -1.12
TTC28-206ENST00000480563 RFX2P48378 723 aa8.03□□□□□ -1.12
TTC28-206ENST00000480563 EIF2B2P49770 351 aaKnown RBP8.03□□□□□ -1.12
TTC28-206ENST00000480563 ZNF705AQ6ZN79 300 aaPredicted RBP8.03□□□□□ -1.12
TTC28-206ENST00000480563 H2BFWTQ7Z2G1 175 aa8.03□□□□□ -1.12
TTC28-206ENST00000480563 NIPSNAP3BQ9BS92 247 aa8.03□□□□□ -1.12
TTC28-206ENST00000480563 IFT46Q9NQC8 304 aa8.03□□□□□ -1.12
TTC28-206ENST00000480563 SMIM9A6NGZ8 99 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 ZNF705FA8MVS1 300 aaPredicted RBP8.02□□□□□ -1.13
TTC28-206ENST00000480563 H3BMM0 161 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 H3BMQ9 156 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 GPR31O00270 319 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 RGS5O15539 181 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 CLN5O75503 358 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 ZNF705DP0CH99 300 aaPredicted RBP8.02□□□□□ -1.13
TTC28-206ENST00000480563 ZNF705BP0CI00 300 aaPredicted RBP8.02□□□□□ -1.13
TTC28-206ENST00000480563 SNCAP37840 140 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 TAS2R20P59543 309 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 SPINK9Q5DT21 86 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 FAM222AQ5U5X8 452 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 C15orf40Q8WUR7 153 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 SEC22AQ96IW7 307 aa8.02□□□□□ -1.13
TTC28-206ENST00000480563 MRPL36Q9P0J6 103 aaKnown RBP8.02□□□□□ -1.13
TTC28-206ENST00000480563 DKK2Q9UBU2 259 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms