RNA–Protein interactions for RNA: ENST00000478616.1

SREBF1-212, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-212ENST00000478616 FAM90A2PQ658T7 463 aa13.97□□□□□ -0.17
SREBF1-212ENST00000478616 TOMM20LQ6UXN7 152 aa13.97□□□□□ -0.17
SREBF1-212ENST00000478616 IL22RA2Q969J5 263 aa13.97□□□□□ -0.17
SREBF1-212ENST00000478616 RNF2Q99496 336 aa13.97□□□□□ -0.17
SREBF1-212ENST00000478616 TUBA4BQ9H853 241 aa13.97□□□□□ -0.17
SREBF1-212ENST00000478616 IGHV7-4-1A0A0J9YVY3 117 aa13.96□□□□□ -0.17
SREBF1-212ENST00000478616 CHEK1O14757 476 aa13.96□□□□□ -0.17
SREBF1-212ENST00000478616 NXPH3O95157 252 aa13.96□□□□□ -0.17
SREBF1-212ENST00000478616 AKR1C4P17516 323 aa13.96□□□□□ -0.17
SREBF1-212ENST00000478616 ANKRD55Q3KP44 614 aa13.96□□□□□ -0.17
SREBF1-212ENST00000478616 ZMAT4Q9H898 229 aa13.96□□□□□ -0.17
SREBF1-212ENST00000478616 NUPL2O15504 423 aaKnown RBP13.95□□□□□ -0.18
SREBF1-212ENST00000478616 IGKV1-17P01599 117 aa13.95□□□□□ -0.18
SREBF1-212ENST00000478616 SNCAP37840 140 aa13.95□□□□□ -0.18
SREBF1-212ENST00000478616 TOMM5Q8N4H5 51 aa13.95□□□□□ -0.18
SREBF1-212ENST00000478616 OR52B4Q8NGK2 314 aa13.95□□□□□ -0.18
SREBF1-212ENST00000478616 FAM110AQ9BQ89 295 aa13.95□□□□□ -0.18
SREBF1-212ENST00000478616 SPATA25Q9BR10 227 aa13.95□□□□□ -0.18
SREBF1-212ENST00000478616 RYR2Q92736 4967 aa13.94□□□□□ -0.18
SREBF1-212ENST00000478616 IGHV3OR16-13A0A075B7E8 117 aa13.94□□□□□ -0.18
SREBF1-212ENST00000478616 IGHV3-74A0A0B4J1X5 117 aa13.94□□□□□ -0.18
SREBF1-212ENST00000478616 A0A0B4J2A0 478 aa13.94□□□□□ -0.18
SREBF1-212ENST00000478616 GNG7O60262 68 aa13.94□□□□□ -0.18
SREBF1-212ENST00000478616 PITX3O75364 302 aa13.94□□□□□ -0.18
SREBF1-212ENST00000478616 C2orf83Q53S99 150 aa13.94□□□□□ -0.18
SREBF1-212ENST00000478616 RNASE11Q8TAA1 199 aaKnown RBP13.94□□□□□ -0.18
SREBF1-212ENST00000478616 MUC7Q8TAX7 377 aa13.94□□□□□ -0.18
SREBF1-212ENST00000478616 SPAG8Q99932 426 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-212ENST00000478616 RHPN1-AS1Q9BWJ2 59 aa13.94□□□□□ -0.18
SREBF1-212ENST00000478616 GAR1Q9NY12 217 aaKnown RBP13.94□□□□□ -0.18
SREBF1-212ENST00000478616 UBQLN2Q9UHD9 624 aa13.94□□□□□ -0.18
SREBF1-212ENST00000478616 SHPKQ9UHJ6 478 aa13.94□□□□□ -0.18
SREBF1-212ENST00000478616 DNAH1Q9P2D7 4330 aa13.94□□□□□ -0.18
SREBF1-212ENST00000478616 PLECQ15149 4684 aaKnown RBP13.93□□□□□ -0.18
SREBF1-212ENST00000478616 TENM2Q9NT68 2774 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 CLN5O75503 358 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 SULT1A3P0DMM9 295 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 SULT1A4P0DMN0 295 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 BTCP35070 178 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 RELQ04864 619 aaPredicted RBP13.93□□□□□ -0.18
SREBF1-212ENST00000478616 PRSS54Q6PEW0 395 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 DUSP18Q8NEJ0 188 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 OR4X1Q8NH49 305 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 ST8SIA2Q92186 375 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 SCGB3A2Q96PL1 93 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 PDCD10Q9BUL8 212 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 VSIRQ9H7M9 311 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 PTTG2Q9NZH5 202 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 HSPB7Q9UBY9 170 aa13.93□□□□□ -0.18
SREBF1-212ENST00000478616 PUS1Q9Y606 427 aaKnown RBP eCLIP13.93□□□□□ -0.18
SREBF1-212ENST00000478616 NPBWR1P48145 328 aa13.92□□□□□ -0.18
SREBF1-212ENST00000478616 CCR6P51684 374 aa13.92□□□□□ -0.18
SREBF1-212ENST00000478616 TNFRSF9Q07011 255 aa13.92□□□□□ -0.18
SREBF1-212ENST00000478616 SPANXN2Q5MJ10 180 aa13.92□□□□□ -0.18
SREBF1-212ENST00000478616 CASC10Q5T4H9 136 aa13.92□□□□□ -0.18
SREBF1-212ENST00000478616 RBPMS2Q6ZRY4 209 aaKnown RBP13.92□□□□□ -0.18
SREBF1-212ENST00000478616 SLC16A13Q7RTY0 426 aa13.92□□□□□ -0.18
SREBF1-212ENST00000478616 TMED4Q7Z7H5 227 aa13.92□□□□□ -0.18
SREBF1-212ENST00000478616 TMEM116Q8NCL8 245 aa13.92□□□□□ -0.18
SREBF1-212ENST00000478616 KCNIP3Q9Y2W7 256 aa13.92□□□□□ -0.18
SREBF1-212ENST00000478616 C3orf84H3BNL1 204 aa13.91□□□□□ -0.18
SREBF1-212ENST00000478616 YIF1AO95070 293 aa13.91□□□□□ -0.18
SREBF1-212ENST00000478616 IGLC1P0CG04 106 aa13.91□□□□□ -0.18
SREBF1-212ENST00000478616 OPRK1P41145 380 aa13.91□□□□□ -0.18
SREBF1-212ENST00000478616 HTR2BP41595 481 aa13.91□□□□□ -0.18
SREBF1-212ENST00000478616 PPP1R1AQ13522 171 aa13.91□□□□□ -0.18
SREBF1-212ENST00000478616 ZNF124Q15973 351 aa13.91□□□□□ -0.18
SREBF1-212ENST00000478616 TIGITQ495A1 244 aa13.91□□□□□ -0.18
SREBF1-212ENST00000478616 ZNF600Q6ZNG1 722 aa13.91□□□□□ -0.18
SREBF1-212ENST00000478616 LRTM2Q8N967 370 aa13.91□□□□□ -0.18
SREBF1-212ENST00000478616 SLC24A4Q8NFF2 622 aa13.91□□□□□ -0.18
SREBF1-212ENST00000478616 RBKSQ9H477 322 aa13.91□□□□□ -0.18
SREBF1-212ENST00000478616 HEYLQ9NQ87 328 aaPredicted RBP13.91□□□□□ -0.18
SREBF1-212ENST00000478616 AGRNO00468 2067 aa13.91□□□□□ -0.18
SREBF1-212ENST00000478616 TRAV14DV4A0A0A6YYC5 116 aa13.9□□□□□ -0.18
SREBF1-212ENST00000478616 CORTO00230 105 aa13.9□□□□□ -0.18
SREBF1-212ENST00000478616 FAUP35544 74 aaKnown RBP13.9□□□□□ -0.18
SREBF1-212ENST00000478616 SUB1P53999 127 aaKnown RBP eCLIP13.9□□□□□ -0.18
SREBF1-212ENST00000478616 SMCO1Q147U7 214 aa13.9□□□□□ -0.18
SREBF1-212ENST00000478616 TMEM128Q5BJH2 165 aa13.9□□□□□ -0.18
SREBF1-212ENST00000478616 LGI3Q8N145 548 aa13.9□□□□□ -0.18
SREBF1-212ENST00000478616 DEDD2Q8WXF8 326 aa13.9□□□□□ -0.18
SREBF1-212ENST00000478616 ENY2Q9NPA8 101 aa13.9□□□□□ -0.18
SREBF1-212ENST00000478616 IGHV3-66A0A0C4DH42 116 aa13.89□□□□□ -0.19
SREBF1-212ENST00000478616 CEBPZOSA8MTT3 80 aa13.89□□□□□ -0.19
SREBF1-212ENST00000478616 AP3S2P59780 193 aa13.89□□□□□ -0.19
SREBF1-212ENST00000478616 FAM24BQ8N5W8 94 aa13.89□□□□□ -0.19
SREBF1-212ENST00000478616 SLC25A21Q9BQT8 299 aaPredicted RBP13.89□□□□□ -0.19
SREBF1-212ENST00000478616 FLVCR2Q9UPI3 526 aa13.89□□□□□ -0.19
SREBF1-212ENST00000478616 U3KQE9 123 aa13.89□□□□□ -0.19
SREBF1-212ENST00000478616 SFT2D2O95562 160 aa13.88□□□□□ -0.19
SREBF1-212ENST00000478616 RNASEH2CQ8TDP1 164 aaKnown RBP13.88□□□□□ -0.19
SREBF1-212ENST00000478616 OVOL2Q9BRP0 275 aa13.88□□□□□ -0.19
SREBF1-212ENST00000478616 GGTLC1Q9BX51 225 aa13.88□□□□□ -0.19
SREBF1-212ENST00000478616 DFFBO76075 338 aa13.87□□□□□ -0.19
SREBF1-212ENST00000478616 NPY1RP25929 384 aa13.87□□□□□ -0.19
SREBF1-212ENST00000478616 RND2P52198 227 aa13.87□□□□□ -0.19
SREBF1-212ENST00000478616 LAMTOR1Q6IAA8 161 aa13.87□□□□□ -0.19
SREBF1-212ENST00000478616 LINC00299Q6ZSB3 139 aa13.87□□□□□ -0.19
SREBF1-212ENST00000478616 APRG1Q8IVJ8 170 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms