RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 USF3Q68DE3 2245 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 TRGV10A0A0A0MS01 117 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 TRAV39A0A0B4J263 110 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 C15orf61A6NNL5 157 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 ZNF705FA8MVS1 300 aaPredicted RBP3.47□□□□□ -1.85
GPNMB-210ENST00000478451 M0R1X1 148 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 FCGR3BO75015 233 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 GOSR1O95249 250 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 IGKV3-15P01624 115 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 IGHG3P01860 377 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 OR5G3P0C626 314 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 ZNF705DP0CH99 300 aaPredicted RBP3.47□□□□□ -1.85
GPNMB-210ENST00000478451 ZNF705BP0CI00 300 aaPredicted RBP3.47□□□□□ -1.85
GPNMB-210ENST00000478451 ARL14EPLP0DKL9 152 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 ESDP10768 282 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 CRISP2P16562 243 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 IGHV1-2P23083 117 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 NPY1RP25929 384 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 TIMP3P35625 211 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 RPL29P47914 159 aaKnown RBP3.47□□□□□ -1.85
GPNMB-210ENST00000478451 TNFSF10P50591 281 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 EDDM3BP56851 147 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 UBE2G2P60604 165 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 GNB1P62873 340 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 RPL30P62888 115 aaKnown RBP3.47□□□□□ -1.85
GPNMB-210ENST00000478451 ZNF90Q03938 601 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 RELQ04864 619 aaPredicted RBP3.47□□□□□ -1.85
GPNMB-210ENST00000478451 P2RY6Q15077 328 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 C1orf194Q5T5A4 169 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 FAM162BQ5T6X4 162 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 WDR82Q6UXN9 313 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 GFRALQ6UXV0 394 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 C9orf139Q6ZV77 190 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 SMIM29Q86T20 159 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 MYPOPQ86VE0 399 aaPredicted RBP3.47□□□□□ -1.85
GPNMB-210ENST00000478451 TMEM219Q86XT9 240 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 PNKDQ8N490 385 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 SLC24A4Q8NFF2 622 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 OR5T1Q8NG75 326 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 SGMS2Q8NHU3 365 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 LRRC29Q8WV35 223 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 TMEM190Q8WZ59 177 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 COQ2Q96H96 371 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 VAMP8Q9BV40 100 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 GNB1LQ9BYB4 327 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 MRPL32Q9BYC8 188 aaKnown RBP3.47□□□□□ -1.85
GPNMB-210ENST00000478451 HES7Q9BYE0 225 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 DEFB127Q9H1M4 99 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 OPN3Q9H1Y3 402 aaPredicted RBP3.47□□□□□ -1.85
GPNMB-210ENST00000478451 UBTD1Q9HAC8 227 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 PLEKHA3Q9HB20 300 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 ZNF586Q9NXT0 402 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 IL19Q9UHD0 177 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 PRNDQ9UKY0 176 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 FOXA2Q9Y261 457 aaPredicted RBP3.47□□□□□ -1.85
GPNMB-210ENST00000478451 ZNF257Q9Y2Q1 563 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 TRIOO75962 3097 aa3.47□□□□□ -1.85
GPNMB-210ENST00000478451 CACNA1GO43497 2377 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 SDK1Q7Z5N4 2213 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 TRAV38-1A0A0B4J264 116 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 KIR2DL5BA0A0G2JN68 375 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 KIR2DL5BA0A0G2JPC4 375 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 A0A1B0GV90 55 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 A0A1B0GWJ7 208 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 A4D1N5 150 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 SRRM5B3KS81 715 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 C15orf65H3BRN8 121 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 TMEM178BH3BS89 294 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 FCN1O00602 326 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 TCAPO15273 167 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 MMP23AO75900 390 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 LYZL6O75951 148 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 WISP2O76076 250 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 HLA-DQA1P01909 254 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 CD55P08174 381 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 OR10J4P0C629 311 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 OR9G9P0C7N8 305 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 GCHFRP30047 84 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 PRDX2P32119 198 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 BRS3P32247 399 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 SSTR5P35346 364 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 CFHR2P36980 270 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 MPV17P39210 176 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 VDAC2P45880 294 aaPredicted RBP3.46□□□□□ -1.86
GPNMB-210ENST00000478451 ATP5G3P48201 142 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 CEBPDP49716 269 aaPredicted RBP3.46□□□□□ -1.86
GPNMB-210ENST00000478451 GNG4P50150 75 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 HSPE1P61604 102 aaKnown RBP3.46□□□□□ -1.86
GPNMB-210ENST00000478451 NUTF2P61970 127 aaKnown RBP3.46□□□□□ -1.86
GPNMB-210ENST00000478451 Q0VG73 95 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 C3AR1Q16581 482 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 POU2AF1Q16633 256 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 TIGITQ495A1 244 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 MORN2Q502X0 79 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 OR10J3Q5JRS4 329 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 CYB5R2Q6BCY4 276 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 RASL11AQ6T310 242 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 TOMM20LQ6UXN7 152 aa3.46□□□□□ -1.86
GPNMB-210ENST00000478451 BAGE3Q86Y29 109 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms