RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 C9orf16Q9BUW7 83 aa4.19□□□□□ -1.74
LINC00173-202ENST00000477702 RIMS4Q9H426 269 aaPredicted RBP4.19□□□□□ -1.74
LINC00173-202ENST00000477702 C21orf62Q9NYP8 219 aa4.19□□□□□ -1.74
LINC00173-202ENST00000477702 THYN1Q9P016 225 aa4.19□□□□□ -1.74
LINC00173-202ENST00000477702 YTHDF2Q9Y5A9 579 aaKnown RBP4.19□□□□□ -1.74
LINC00173-202ENST00000477702 RFNGQ9Y644 331 aa4.19□□□□□ -1.74
LINC00173-202ENST00000477702 A0A0A6YYD4 124 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 TRAV2A0A0B4J234 112 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 TEX48A0A1B0GUV7 120 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 TRDCB7Z8K6 153 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 K7EQG2 157 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 GAGE7O76087 117 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 EIF4EP06730 217 aaKnown RBP4.18□□□□□ -1.74
LINC00173-202ENST00000477702 P0C879 139 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 GAGE12FP0CL80 117 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 GAGE12GP0CL81 117 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 GAGE12IP0CL82 117 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 SRMP19623 302 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 CAMPP49913 170 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 RPL30P62888 115 aaKnown RBP4.18□□□□□ -1.74
LINC00173-202ENST00000477702 GAGE1Q13065 139 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 GAGE4Q13068 117 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 OXA1LQ15070 435 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 IZUMO4Q1ZYL8 232 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 PSMG4Q5JS54 123 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 TMEM69Q5SWH9 247 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 KCTD9Q7L273 389 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 CDH26Q8IXH8 852 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 PUSL1Q8N0Z8 303 aaKnown RBP4.18□□□□□ -1.74
LINC00173-202ENST00000477702 OR10J5Q8NHC4 309 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 OR10C1Q96KK4 312 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 RAB40CQ96S21 281 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 C1QTNF4Q9BXJ3 329 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 FNDC4Q9H6D8 234 aaPredicted RBP4.18□□□□□ -1.74
LINC00173-202ENST00000477702 C12orf4Q9NQ89 552 aa4.18□□□□□ -1.74
LINC00173-202ENST00000477702 FAT4Q6V0I7 4981 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 TRAV3A0A0B4J244 114 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 TRBV5-5A0A0J9YX44 114 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 LOC100130705A0A1B0GUX0 176 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 SMIM9A6NGZ8 99 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 K7EIM0 57 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 EI24O14681 340 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 SOCS1O15524 211 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 FABP7O15540 132 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 OXTP01178 125 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 IGKV3-20P01619 116 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 IGHV3-48P01763 117 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 OR13C7P0DN81 318 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 DEFB130BP0DP73 79 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 DEFB130AP0DP74 79 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 CELP19835 753 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 MAPK3P27361 379 aaPredicted RBP4.17□□□□□ -1.74
LINC00173-202ENST00000477702 SERPINB10P48595 397 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 TAS2R43P59537 309 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 NUTF2P61970 127 aaKnown RBP4.17□□□□□ -1.74
LINC00173-202ENST00000477702 RELQ04864 619 aaPredicted RBP4.17□□□□□ -1.74
LINC00173-202ENST00000477702 Q499Y3 187 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 YIF1BQ5BJH7 314 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 TOMM20LQ6UXN7 152 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 GDPD1Q8N9F7 314 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 OR4A4PQ8NGN8 299 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 RHOXF1Q8NHV9 184 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 VSTM2AQ8TAG5 236 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 PYDC1Q8WXC3 89 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 MAFIPQ8WZ33 124 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 TMEM59Q9BXS4 323 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 VSIRQ9H7M9 311 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 HRASLSQ9HDD0 168 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 AMBNQ9NP70 447 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 BABAM2Q9NXR7 383 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 GHRLQ9UBU3 117 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 MGAT4AQ9UM21 535 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 MRPS7Q9Y2R9 242 aaKnown RBP4.17□□□□□ -1.74
LINC00173-202ENST00000477702 PRELID3BQ9Y3B1 194 aa4.17□□□□□ -1.74
LINC00173-202ENST00000477702 PUS1Q9Y606 427 aaKnown RBP eCLIP4.17□□□□□ -1.74
LINC00173-202ENST00000477702 DNAH8Q96JB1 4490 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 A0A087WTM6 91 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 TRBV6-7A0A0A0MS04 114 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 OGG1O15527 345 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 CYB5BO43169 146 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 CD5P06127 495 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 UBBP0CG47 229 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 LIMS3P0CW19 117 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 LIMS4P0CW20 117 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 GNRHRP30968 328 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 FGF9P31371 208 aaPredicted RBP4.16□□□□□ -1.74
LINC00173-202ENST00000477702 DEFB1P60022 68 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 RPS11P62280 158 aaKnown RBP eCLIP4.16□□□□□ -1.74
LINC00173-202ENST00000477702 MRPS15P82914 257 aaKnown RBP4.16□□□□□ -1.74
LINC00173-202ENST00000477702 WT1-ASQ06250 92 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 UNC119Q13432 240 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 TTC23Q5W5X9 447 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 NKAIN3Q8N8D7 197 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 ZFP41Q8N8Y5 198 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 OR52I1Q8NGK6 324 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 OR4S2Q8NH73 311 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 TCTEX1D2Q8WW35 142 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 SMIM19Q96E16 107 aa4.16□□□□□ -1.74
LINC00173-202ENST00000477702 CMSS1Q9BQ75 279 aaKnown RBP4.16□□□□□ -1.74
LINC00173-202ENST00000477702 GINS4Q9BRT9 223 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms