RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 THYN1Q9P016 225 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 FUT9Q9Y231 359 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 HILPDAQ9Y5L2 63 aa6.34□□□□□ -1.39
VMA21-203ENST00000477649 ADGRG4Q8IZF6 3080 aa6.34□□□□□ -1.4
VMA21-203ENST00000477649 HECTD1Q9ULT8 2610 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 NBPF19A0A087WUL8 3843 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 TRAV20A0A0B4J274 112 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 C7orf77A4D0Y5 90 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 B4DSR2 109 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 E7EUB6 86 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 NPFFO15130 113 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 HLA-DRB1P01911 266 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 AREGP15514 252 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 HIST1H1BP16401 226 aaKnown RBP6.33□□□□□ -1.4
VMA21-203ENST00000477649 TMEM11P17152 192 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 CTRB1P17538 263 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 GCHFRP30047 84 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 NPBWR1P48145 328 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 FGF8P55075 233 aaPredicted RBP6.33□□□□□ -1.4
VMA21-203ENST00000477649 PLP1P60201 277 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 GNB1P62873 340 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 KLRD1Q13241 179 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 FXYD3Q14802 87 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 AWAT1Q58HT5 328 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 C10orf55Q5SWW7 151 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 LDLRAD2Q5SZI1 272 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 CTRB2Q6GPI1 263 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 SPNS3Q6ZMD2 512 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 SSX7Q7RTT5 188 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 LRRC75A-AS1Q8N1F1 130 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 OR4X1Q8NH49 305 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 SSMEM1Q8WWF3 244 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 NPIPB3Q92617 1050 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 RPUSD4Q96CM3 377 aaKnown RBP6.33□□□□□ -1.4
VMA21-203ENST00000477649 ZNF48Q96MX3 618 aaPredicted RBP6.33□□□□□ -1.4
VMA21-203ENST00000477649 UHRF2Q96PU4 802 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 CTDSP1Q9GZU7 261 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 DNAJC4Q9NNZ3 241 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 RPS10P5Q9NQ39 176 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 TPSG1Q9NRR2 321 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 BEX4Q9NWD9 120 aaPredicted RBP6.33□□□□□ -1.4
VMA21-203ENST00000477649 NAT8Q9UHE5 227 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 NBASA2RRP1 2371 aa6.33□□□□□ -1.4
VMA21-203ENST00000477649 MYO18BQ8IUG5 2567 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 DOCK11Q5JSL3 2073 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 IGHV1-69DA0A0B4J2H0 117 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 ZNF727A8MUV8 499 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 C11orf94C9JXX5 98 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 J3QLI3 93 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 HMGB3O15347 200 aaKnown RBP6.32□□□□□ -1.4
VMA21-203ENST00000477649 COX7A2P2O60397 106 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 IGHV1-69P01742 117 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 MT-ND4LP03901 98 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 MSMBP08118 114 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 C8orf88P0DMB2 117 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 DEFA4P12838 97 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 CNTFRP26992 372 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 CD81P60033 236 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 TMEM241Q24JQ0 296 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 KLK9Q2XQG4 91 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 RNF212Q495C1 297 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 FAM78BQ5VT40 261 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 FAM90A2PQ658T7 463 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 LHFPL4Q7Z7J7 247 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 TTC9CQ8N5M4 171 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 ABHD5Q8WTS1 349 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 ARPC1AQ92747 370 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 MISP3Q96FF7 219 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 ACY3Q96HD9 319 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 ATP6V0BQ99437 205 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 RASL11BQ9BPW5 248 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 MEGF9Q9H1U4 602 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 FNDC4Q9H6D8 234 aaPredicted RBP6.32□□□□□ -1.4
VMA21-203ENST00000477649 TNFRSF19Q9NS68 423 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 GAR1Q9NY12 217 aaKnown RBP6.32□□□□□ -1.4
VMA21-203ENST00000477649 DOK5Q9P104 306 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 KLK9Q9UKQ9 250 aa6.32□□□□□ -1.4
VMA21-203ENST00000477649 PUS1Q9Y606 427 aaKnown RBP eCLIP6.32□□□□□ -1.4
VMA21-203ENST00000477649 RELNP78509 3460 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 IGKV1OR2-108A0A075B7D4 117 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 IGHV4-61A0A0C4DH41 118 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 CENPVL3A0A0U1RRI6 287 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 A0A1W2PRE2 83 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 FAM74A7A6NL05 159 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 NCBP2LA6PVI3 153 aaKnown RBP6.31□□□□□ -1.4
VMA21-203ENST00000477649 TSPAN4O14817 238 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 TGOLN2O43493 480 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 PAGE4O60829 102 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 ARL14EPLP0DKL9 152 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 SAA4P35542 130 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 RND2P52198 227 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 DLX1P56177 255 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 CX3CL1P78423 397 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 C10orf113Q5VZT2 155 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 C16orf82Q7Z2V1 217 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 IQCF2Q8IXL9 164 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.31□□□□□ -1.4
VMA21-203ENST00000477649 OR4F5Q8NH21 305 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 OR2T6Q8NHC8 308 aa6.31□□□□□ -1.4
VMA21-203ENST00000477649 PERPQ96FX8 193 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms