RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 FXYD3Q14802 87 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 CT83Q5H943 113 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 RNFT1Q5M7Z0 435 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 MRPL54Q6P161 138 aaKnown RBP11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 TMPRSS7Q7RTY8 843 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 ZNF738Q8NE65 137 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 OR2Z1Q8NG97 314 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 OR4A5Q8NH83 315 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 OSR1Q8TAX0 266 aaPredicted RBP11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 GAL3ST2Q9H3Q3 398 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 GCM1Q9NP62 436 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 SERTAD4Q9NUC0 356 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 DKK4Q9UBT3 224 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 TANC2Q9HCD6 1990 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 DSCAML1Q8TD84 2053 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 A0A1W2PN81 502 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 FAM181BA6NEQ2 426 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 CA7P43166 264 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 KIR2DL2P43627 348 aaPredicted RBP11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 REG1BP48304 166 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 UBE2L3P68036 154 aaKnown RBP11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 LEMD1Q68G75 181 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 STPG4Q8N801 248 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 FAM167A-AS1Q96KT0 104 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 MSRB2Q9Y3D2 182 aa11.04□□□□□ -0.64
HLA-DMA-208ENST00000477541 IGHV1-18A0A0C4DH31 117 aa11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 TEX50A0A1B0GTY4 177 aa11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 H0YJW9 148 aa11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 K7EP13 123 aa11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 AGFG2O95081 481 aa11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 NDUFB8O95169 186 aa11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 TCL1AP56279 114 aa11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 UBE2G1P62253 170 aa11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 ERHP84090 104 aaKnown RBP11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 KIAA1644Q3SXP7 199 aa11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 SLC25A48Q6ZT89 311 aaKnown RBP11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 SPACA3Q8IXA5 215 aa11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 SLC25A2Q9BXI2 301 aa11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 AMMECR1Q9Y4X0 333 aaPredicted RBP11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 COX11Q9Y6N1 276 aa11.03□□□□□ -0.64
HLA-DMA-208ENST00000477541 IGKV1OR2-108A0A075B7D4 117 aa11.02□□□□□ -0.65
HLA-DMA-208ENST00000477541 PEX7O00628 323 aa11.02□□□□□ -0.65
HLA-DMA-208ENST00000477541 CRXO43186 299 aaPredicted RBP11.02□□□□□ -0.65
HLA-DMA-208ENST00000477541 TCF21O43680 179 aa11.02□□□□□ -0.65
HLA-DMA-208ENST00000477541 SLAQ13239 276 aa11.02□□□□□ -0.65
HLA-DMA-208ENST00000477541 UBE2V1Q13404 147 aa11.02□□□□□ -0.65
HLA-DMA-208ENST00000477541 LYG1Q8N1E2 194 aa11.02□□□□□ -0.65
HLA-DMA-208ENST00000477541 CHCHD1Q96BP2 118 aaKnown RBP11.02□□□□□ -0.65
HLA-DMA-208ENST00000477541 SARAFQ96BY9 339 aa11.02□□□□□ -0.65
HLA-DMA-208ENST00000477541 ALKBH7Q9BT30 221 aaPredicted RBP11.02□□□□□ -0.65
HLA-DMA-208ENST00000477541 HINT2Q9BX68 163 aa11.02□□□□□ -0.65
HLA-DMA-208ENST00000477541 CLEC7AQ9BXN2 247 aa11.02□□□□□ -0.65
HLA-DMA-208ENST00000477541 ST20Q9HBF5 79 aa11.02□□□□□ -0.65
HLA-DMA-208ENST00000477541 A0A1B0GXF2 115 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 NKX6-3A6NJ46 265 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 M0R2Z0 102 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 TFPI2P48307 235 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 SUB1P53999 127 aaKnown RBP eCLIP11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 MFAP2P55001 183 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 FAM71F2Q6NXP2 309 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 C1orf229Q6ZS94 237 aaPredicted RBP11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 ZNF329Q86UD4 541 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 CNEP1R1Q8N9A8 125 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 ZNF430Q9H8G1 570 aaPredicted RBP11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 RPUSD1Q9UJJ7 312 aaKnown RBP11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 FAM231BA6NCW3 169 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 AHRRA9YTQ3 701 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 COX7A2P2O60397 106 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 SPINK4O60575 86 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 APOA2P02652 100 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 NTF3P20783 257 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 PTTG1IPP53801 180 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 BHLHA15Q7RTS1 189 aaPredicted RBP11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 MUC15Q8N387 334 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 THAP8Q8NA92 274 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 NUP35Q8NFH5 326 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 VSTM2AQ8TAG5 236 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 PAXXQ9BUH6 204 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 GFRA4Q9GZZ7 299 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 NDUFA4L2Q9NRX3 87 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 TNFRSF19Q9NS68 423 aa11.01□□□□□ -0.65
HLA-DMA-208ENST00000477541 A0A1W2PNU3 283 aaPredicted RBP11□□□□□ -0.65
HLA-DMA-208ENST00000477541 OR5AL1P0C617 328 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 GLRXP35754 106 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 TNXAQ16473 311 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 C10orf113Q5VZT2 155 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 ZNF833PQ6ZTB9 187 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 NHLRC2Q8NBF2 726 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 ZNRF1Q8ND25 227 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 NUDT10Q8NFP7 164 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 ZNF596Q8TC21 504 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 SNRNP40Q96DI7 357 aaKnown RBP11□□□□□ -0.65
HLA-DMA-208ENST00000477541 NUDT11Q96G61 164 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 PLPPR2Q96GM1 343 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 TMEM70Q9BUB7 260 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 ZNF71Q9NQZ8 489 aaPredicted RBP11□□□□□ -0.65
HLA-DMA-208ENST00000477541 ZNF492Q9P255 531 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 RNF7Q9UBF6 113 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 PROCRQ9UNN8 238 aa11□□□□□ -0.65
HLA-DMA-208ENST00000477541 KLF12Q9Y4X4 402 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms