RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 FOXA3P55318 350 aaPredicted RBP9.08□□□□□ -0.96
COL27A1-204ENST00000477421 SELENOTP62341 195 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 FAM90A2PQ658T7 463 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 LYPD2Q6UXB3 125 aa9.08□□□□□ -0.96
COL27A1-204ENST00000477421 IGHV3-49A0A0A0MS15 119 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 MMP23AO75900 390 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 TIMP3P35625 211 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 ZNF134P52741 427 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 SMIM15Q7Z3B0 74 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 ATOH7Q8N100 152 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 PRSS3P2Q8NHM4 247 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 C2CD3Q4AC94 2353 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 ZNF726P1Q15940 193 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 TMEM144Q7Z5S9 345 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 MGST2Q99735 147 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 NDFIP1Q9BT67 221 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 ELOVL5Q9NYP7 299 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 MUC21A0A0G2JKD1 596 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 MUC21A0A140T8X8 626 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 TM4SF5O14894 197 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 CD33P20138 364 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 CDKN1AP38936 164 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 TMPRSS3P57727 454 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 RELBQ01201 579 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 MUC21Q5SSG8 566 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 TMEM200BQ69YZ2 307 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 SPRY4Q9C004 299 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 NAGKQ9UJ70 344 aa9.07□□□□□ -0.96
COL27A1-204ENST00000477421 ABCA2Q9BZC7 2435 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.06□□□□□ -0.96
COL27A1-204ENST00000477421 F2RL2O00254 374 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 SOD3P08294 240 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 HIST1H1EP10412 219 aaKnown RBP9.06□□□□□ -0.96
COL27A1-204ENST00000477421 PPOXP50336 477 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 GNG5P63218 68 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 ADIPOQQ15848 244 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 GOLT1AQ6ZVE7 132 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 STXBP6Q8NFX7 210 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 TXNDC17Q9BRA2 123 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 GSX1Q9H4S2 264 aaPredicted RBP9.06□□□□□ -0.96
COL27A1-204ENST00000477421 ZFYVE26Q68DK2 2539 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 NDUFA2O43678 99 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 CCKARP32238 428 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 SCGB2A2Q13296 93 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 LY6DQ14210 128 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 AARDQ4LEZ3 155 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 FA2HQ7L5A8 372 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 PGLYRP4Q96LB8 373 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 FAM215AQ9Y5M1 114 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 TEX50A0A1B0GTY4 177 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 RBFOX2O43251 390 aaKnown RBP eCLIP9.06□□□□□ -0.968e-7■□□□□ 9.9
COL27A1-204ENST00000477421 VENTXO95231 258 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 ORM1P02763 201 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 NBEAP1P0C6P0 100 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 LGALS7P47929 136 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 SLC25A33Q9BSK2 321 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 DYSFO75923 2080 aa9.06□□□□□ -0.96
COL27A1-204ENST00000477421 NPIPB11E5RHQ5 1161 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 IL4P05112 153 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 HNRNPA3P51991 378 aaKnown RBP9.05□□□□□ -0.96
COL27A1-204ENST00000477421 PKIAP61925 76 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 TMEM177Q53S58 311 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 TRAV1-1A0A0B4J248 108 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 LIPFP07098 398 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 LMO1P25800 156 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 LCN2P80188 198 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 TMEM183BQ1AE95 376 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 TMEM183AQ8IXX5 376 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.05□□□□□ -0.96
COL27A1-204ENST00000477421 NEU1Q99519 415 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 PRO3102Q9H379 93 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 USP9XQ93008 2570 aaPredicted RBP9.05□□□□□ -0.96
COL27A1-204ENST00000477421 DIRC3C9JPN6 131 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 DDTP30046 118 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 BRS3P32247 399 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 C11orf53Q8IXP5 236 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 GAFA1Q96PS6 74 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 CBLN4Q9NTU7 201 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 CEP192Q8TEP8 1941 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 LOC105371242A0A075B767 164 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 UBE2CO00762 179 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 AGMATQ9BSE5 352 aa9.05□□□□□ -0.96
COL27A1-204ENST00000477421 S100A4P26447 101 aaKnown RBP9.04□□□□□ -0.96
COL27A1-204ENST00000477421 S100A7P31151 101 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 PRCDQ00LT1 54 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 MEF2CQ06413 473 aaPredicted RBP9.04□□□□□ -0.96
COL27A1-204ENST00000477421 LINC01551Q86U37 167 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 FAM19A2Q8N3H0 131 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 FOXA2Q9Y261 457 aaPredicted RBP9.04□□□□□ -0.96
COL27A1-204ENST00000477421 LOC389332A0A1B0GUA5 103 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 CD69Q07108 199 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 KLF17Q5JT82 389 aaPredicted RBP9.04□□□□□ -0.96
COL27A1-204ENST00000477421 Q6ZN92 141 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 C5orf17Q8NAS9 161 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 IGHV3-66A0A0C4DH42 116 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 PYY3Q5JQD4 70 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 ZNF788Q6ZQV5 615 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 Q6ZSR3 168 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 C11orf42Q8N5U0 333 aa9.04□□□□□ -0.96
COL27A1-204ENST00000477421 OR4A5Q8NH83 315 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms