RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 A0A1B0GV50 99 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 GATA2P23769 480 aaPredicted RBP11.36□□□□□ -0.59
COL4A6-206ENST00000477085 BLCAPP62952 87 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 PRR20EP86478 221 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 PRR20CP86479 221 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 PRR20DP86480 221 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 PRR20BP86481 221 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 PRR20AP86496 221 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 CCDC28AQ8IWP9 274 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 RCC1LQ96I51 464 aaKnown RBP11.36□□□□□ -0.59
COL4A6-206ENST00000477085 PXMP4Q9Y6I8 212 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 C17orf112F2Z3M2 114 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 G3V318 75 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 K7EIM0 57 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 ZP3P21754 424 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 OR10J1P30954 320 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 DPPA3Q6W0C5 159 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 SCRT1Q9BWW7 348 aa11.36□□□□□ -0.59
COL4A6-206ENST00000477085 OTOGQ6ZRI0 2925 aa11.35□□□□□ -0.59
COL4A6-206ENST00000477085 IGLV11-55A0A075B6I3 123 aa11.35□□□□□ -0.59
COL4A6-206ENST00000477085 H2AFB1P0C5Y9 115 aa11.35□□□□□ -0.59
COL4A6-206ENST00000477085 RPL29P47914 159 aaKnown RBP11.35□□□□□ -0.59
COL4A6-206ENST00000477085 RND2P52198 227 aa11.35□□□□□ -0.59
COL4A6-206ENST00000477085 Q6YL49 198 aa11.35□□□□□ -0.59
COL4A6-206ENST00000477085 STPG3Q8N7X2 389 aa11.35□□□□□ -0.59
COL4A6-206ENST00000477085 THAP8Q8NA92 274 aa11.35□□□□□ -0.59
COL4A6-206ENST00000477085 BPIFCQ8NFQ6 507 aa11.35□□□□□ -0.59
COL4A6-206ENST00000477085 OR10G4Q8NGN3 311 aa11.35□□□□□ -0.59
COL4A6-206ENST00000477085 OR10G9Q8NGN4 311 aa11.35□□□□□ -0.59
COL4A6-206ENST00000477085 OR10G7Q8NGN6 311 aa11.35□□□□□ -0.59
COL4A6-206ENST00000477085 SLC35E1Q96K37 410 aa11.35□□□□□ -0.59
COL4A6-206ENST00000477085 GSX1Q9H4S2 264 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-206ENST00000477085 ANK3Q12955 4377 aaKnown RBP11.35□□□□□ -0.59
COL4A6-206ENST00000477085 CORTO00230 105 aa11.34□□□□□ -0.59
COL4A6-206ENST00000477085 DEFA5Q01523 94 aa11.34□□□□□ -0.59
COL4A6-206ENST00000477085 ZNF90Q03938 601 aa11.34□□□□□ -0.59
COL4A6-206ENST00000477085 C19orf54Q5BKX5 351 aa11.34□□□□□ -0.59
COL4A6-206ENST00000477085 TMEM116Q8NCL8 245 aa11.34□□□□□ -0.59
COL4A6-206ENST00000477085 SFT2D1Q8WV19 159 aa11.34□□□□□ -0.59
COL4A6-206ENST00000477085 MBD3L1Q8WWY6 194 aa11.34□□□□□ -0.59
COL4A6-206ENST00000477085 PRDM13Q9H4Q3 707 aa11.34□□□□□ -0.59
COL4A6-206ENST00000477085 HMGB3O15347 200 aaKnown RBP11.33□□□□□ -0.59
COL4A6-206ENST00000477085 SOX15O60248 233 aa11.33□□□□□ -0.59
COL4A6-206ENST00000477085 TSPAN15O95858 294 aa11.33□□□□□ -0.59
COL4A6-206ENST00000477085 M6PRP20645 277 aa11.33□□□□□ -0.59
COL4A6-206ENST00000477085 B2MP61769 119 aa11.33□□□□□ -0.59
COL4A6-206ENST00000477085 ECSCRQ19T08 205 aa11.33□□□□□ -0.59
COL4A6-206ENST00000477085 UNQ5815/PRO19632Q6UWF5 114 aa11.33□□□□□ -0.59
COL4A6-206ENST00000477085 IL34Q6ZMJ4 242 aa11.33□□□□□ -0.59
COL4A6-206ENST00000477085 LINC00052Q96N35 136 aa11.33□□□□□ -0.59
COL4A6-206ENST00000477085 TNFRSF19Q9NS68 423 aa11.33□□□□□ -0.59
COL4A6-206ENST00000477085 SLC39A9Q9NUM3 307 aa11.33□□□□□ -0.59
COL4A6-206ENST00000477085 LINC00527Q9UJ94 153 aa11.33□□□□□ -0.59
COL4A6-206ENST00000477085 RAB19A4D1S5 217 aa11.33□□□□□ -0.6
COL4A6-206ENST00000477085 C9JQL5 133 aa11.33□□□□□ -0.6
COL4A6-206ENST00000477085 CD5LO43866 347 aa11.33□□□□□ -0.6
COL4A6-206ENST00000477085 NDUFB8O95169 186 aa11.33□□□□□ -0.6
COL4A6-206ENST00000477085 FGF8P55075 233 aaPredicted RBP11.33□□□□□ -0.6
COL4A6-206ENST00000477085 RAB31Q13636 194 aa11.33□□□□□ -0.6
COL4A6-206ENST00000477085 AKIRIN2Q53H80 203 aa11.33□□□□□ -0.6
COL4A6-206ENST00000477085 ETFRF1Q6IPR1 90 aa11.33□□□□□ -0.6
COL4A6-206ENST00000477085 LCN15Q6UWW0 184 aa11.33□□□□□ -0.6
COL4A6-206ENST00000477085 TMUB1Q9BVT8 246 aa11.33□□□□□ -0.6
COL4A6-206ENST00000477085 TMEM231Q9H6L2 316 aa11.33□□□□□ -0.6
COL4A6-206ENST00000477085 SLC25A22Q9H936 323 aa11.33□□□□□ -0.6
COL4A6-206ENST00000477085 PITPNC1Q9UKF7 332 aa11.33□□□□□ -0.6
COL4A6-206ENST00000477085 S4R3C0 116 aa11.33□□□□□ -0.6
COL4A6-206ENST00000477085 TRAV1-1A0A0B4J248 108 aa11.32□□□□□ -0.6
COL4A6-206ENST00000477085 MBP02144 154 aa11.32□□□□□ -0.6
COL4A6-206ENST00000477085 KLK9Q2XQG4 91 aa11.32□□□□□ -0.6
COL4A6-206ENST00000477085 ACOT6Q3I5F7 207 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-206ENST00000477085 FAM122CQ6P4D5 195 aa11.32□□□□□ -0.6
COL4A6-206ENST00000477085 CYP2G1PQ6ZSU1 146 aa11.32□□□□□ -0.6
COL4A6-206ENST00000477085 OR1L6Q8NGR2 347 aa11.32□□□□□ -0.6
COL4A6-206ENST00000477085 FAM110DQ8TAY7 271 aaPredicted RBP11.32□□□□□ -0.6
COL4A6-206ENST00000477085 RAB24Q969Q5 203 aa11.32□□□□□ -0.6
COL4A6-206ENST00000477085 KLK9Q9UKQ9 250 aa11.32□□□□□ -0.6
COL4A6-206ENST00000477085 TCRBV4S1A1TA0A5B7 111 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 SEC14L6B5MCN3 397 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 KRBOX1C9JBD0 128 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 F8W735 103 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-206ENST00000477085 OR2J3O76001 311 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 IGHG2P01859 326 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 CRIP2P52943 208 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-206ENST00000477085 C9orf152Q5JTZ5 239 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 OR4X1Q8NH49 305 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 SMR3AQ99954 134 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 SEPSECSQ9HD40 501 aaKnown RBP11.31□□□□□ -0.6
COL4A6-206ENST00000477085 CUBNO60494 3623 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 PSMB11A5LHX3 300 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 ZFP92A6NM28 416 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 NUDT19A8MXV4 375 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 HOXA3O43365 443 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-206ENST00000477085 IGF1P05019 195 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 IGLC1P0CG04 106 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 SPATA31B1PQ5VZV4 182 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 SPNS3Q6ZMD2 512 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 C16orf82Q7Z2V1 217 aa11.31□□□□□ -0.6
COL4A6-206ENST00000477085 NOL4LQ96MY1 436 aaPredicted RBP11.31□□□□□ -0.6
COL4A6-206ENST00000477085 TLN2Q9Y4G6 2542 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms