RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 CDSNQ15517 529 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 TBR1Q16650 682 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 CFAP161Q6P656 301 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 SMIM15Q7Z3B0 74 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 TMEM183AQ8IXX5 376 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 OR4S2Q8NH73 311 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 SEMA5BQ9P283 1151 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 SLC25A10Q9UBX3 287 aaPredicted RBP4.12□□□□□ -1.75
CCDC39-204ENST00000476379 CEACAM18A8MTB9 384 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 OR5AL1P0C617 328 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 GCHFRP30047 84 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 SRSF4Q08170 494 aaKnown RBP4.12□□□□□ -1.75
CCDC39-204ENST00000476379 IL15RAQ13261 267 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 RIPPLY2Q5TAB7 128 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 UNQ5815/PRO19632Q6UWF5 114 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 OR4C5Q8NGB2 326 aa4.12□□□□□ -1.75
CCDC39-204ENST00000476379 MRPL20Q9BYC9 149 aaKnown RBP4.12□□□□□ -1.75
CCDC39-204ENST00000476379 FBN2P35556 2912 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 TRAV17A0A0B4J275 112 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 CORTO00230 105 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 PRRG2O14669 202 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 ZNF134P52741 427 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 SERF2P84101 59 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 TREML4Q6UXN2 200 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 BCL2L2Q92843 193 aaPredicted RBP4.11□□□□□ -1.75
CCDC39-204ENST00000476379 C10orf35Q96D05 121 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 FBXL15Q9H469 300 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 NPVFQ9HCQ7 196 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 UFC1Q9Y3C8 167 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 AHRRA9YTQ3 701 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 IGHV2-70P01814 119 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 GNLYP22749 145 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 ECSCRQ19T08 205 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 TMEM183BQ1AE95 376 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 CYP2G1PQ6ZSU1 146 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 GOLT1AQ6ZVE7 132 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 MSRB2Q9Y3D2 182 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 IGHV2OR16-5A0A0B4J2B6 119 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 NKX6-3A6NJ46 265 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 NDUFB3O43676 98 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 APCSP02743 223 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 WNT2P09544 360 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 CD40P25942 277 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 NMUP48645 174 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 SSBP2P81877 361 aaPredicted RBP4.11□□□□□ -1.75
CCDC39-204ENST00000476379 TMEM177Q53S58 311 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 C10orf113Q5VZT2 155 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 LCNL1Q6ZST4 164 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 REC114Q7Z4M0 266 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 LINC01551Q86U37 167 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 Q8IYB0 196 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 PRSS3P2Q8NHM4 247 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 RPEQ96AT9 228 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 MRPL37Q9BZE1 423 aaKnown RBP4.11□□□□□ -1.75
CCDC39-204ENST00000476379 GOLT1BQ9Y3E0 138 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 ELOA3CA0A087WX78 387 aaPredicted RBP4.11□□□□□ -1.75
CCDC39-204ENST00000476379 NPIPB13A6NJU9 1138 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 NPIPB4C9JG80 1138 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 K7EMI3 77 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 CXorf1O96002 111 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 TGFAP01135 160 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 NPSP0C0P6 89 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 SCGB2A2Q13296 93 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 ZNF497Q6ZNH5 498 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 MOB1BQ7L9L4 216 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 FAM90A1Q86YD7 464 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 PDPNQ86YL7 162 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 MGST2Q99735 147 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 PAXXQ9BUH6 204 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 NBEAL1Q6ZS30 2694 aa4.11□□□□□ -1.75
CCDC39-204ENST00000476379 AMY1AP04745 511 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 SAA1P0DJI8 122 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-204ENST00000476379 CNTFRP26992 372 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 TAS2R45P59539 299 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 EFNB3Q15768 340 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 EXOC3-AS1Q8N2X6 119 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 GMPPAQ96IJ6 420 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-204ENST00000476379 TMUB1Q9BVT8 246 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 PRDM13Q9H4Q3 707 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 TPSG1Q9NRR2 321 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 RNF7Q9UBF6 113 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 FBLN5Q9UBX5 448 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 TIMM9Q9Y5J7 89 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 CCL21O00585 134 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 IGKV3-20P01619 116 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 IGHV2-5P01817 119 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 NPPCP23582 126 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 Q6P435 159 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 LINC00305Q7Z4B0 112 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 OR8B3Q8NGG8 313 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 RCHY1Q96PM5 261 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 SNHG12Q9BXW3 62 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 DNAJC4Q9NNZ3 241 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 AMMECR1Q9Y4X0 333 aaPredicted RBP4.1□□□□□ -1.75
CCDC39-204ENST00000476379 IGKV3D-15A0A087WSY6 115 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 LOC102723996A0A087X1L8 192 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 hDV102S1A0JD36 115 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 C20orf202A1L168 122 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 C15orf62A8K5M9 175 aa4.1□□□□□ -1.75
CCDC39-204ENST00000476379 IGKV3-15P01624 115 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms