RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 HIST1H2BHQ93079 126 aa14.79□□□□□ -0.04
LPCAT1-202ENST00000475622 HIST1H2BNQ99877 126 aa14.79□□□□□ -0.04
LPCAT1-202ENST00000475622 HIST1H2BMQ99879 126 aa14.79□□□□□ -0.04
LPCAT1-202ENST00000475622 PRR32B1ATL7 298 aa14.79□□□□□ -0.04
LPCAT1-202ENST00000475622 IFI27P40305 119 aaPredicted RBP14.79□□□□□ -0.04
LPCAT1-202ENST00000475622 SLC50A1Q9BRV3 221 aa14.79□□□□□ -0.04
LPCAT1-202ENST00000475622 FNDC4Q9H6D8 234 aaPredicted RBP14.79□□□□□ -0.04
LPCAT1-202ENST00000475622 COL4A1P02462 1669 aa14.79□□□□□ -0.04
LPCAT1-202ENST00000475622 ARHGEF17Q96PE2 2063 aaPredicted RBP14.79□□□□□ -0.04
LPCAT1-202ENST00000475622 PPIFP30405 207 aaKnown RBP14.79□□□□□ -0.04
LPCAT1-202ENST00000475622 LHX2P50458 406 aa14.79□□□□□ -0.04
LPCAT1-202ENST00000475622 ID3Q02535 119 aa14.79□□□□□ -0.04
LPCAT1-202ENST00000475622 SDK2Q58EX2 2172 aa14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 POLR2AP24928 1970 aaKnown RBP14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 TRAV9-2A0A087WT02 112 aa14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 A0A1W2PRE2 83 aa14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 TCRBV4S1A1TA0A5B7 111 aa14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 CDKN1AP38936 164 aa14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 PSG8Q9UQ74 426 aa14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 MYOFQ9NZM1 2061 aa14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 COL4A5P29400 1685 aa14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 C1QL4Q86Z23 238 aa14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 MRPS18CQ9Y3D5 142 aaKnown RBP14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 NPFFR1Q9GZQ6 430 aa14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 TMEM133Q9H2Q1 129 aa14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 WFDC1Q9HC57 220 aa14.78□□□□□ -0.04
LPCAT1-202ENST00000475622 ZNF883P0CG24 379 aa14.77□□□□□ -0.04
LPCAT1-202ENST00000475622 CSRP2Q16527 193 aa14.77□□□□□ -0.04
LPCAT1-202ENST00000475622 ZNF585BQ52M93 769 aa14.77□□□□□ -0.04
LPCAT1-202ENST00000475622 FAM89BQ8N5H3 189 aa14.77□□□□□ -0.04
LPCAT1-202ENST00000475622 ZNF319Q9P2F9 582 aa14.77□□□□□ -0.04
LPCAT1-202ENST00000475622 SRSF1Q07955 248 aaKnown RBP eCLIP14.77□□□□□ -0.04
LPCAT1-202ENST00000475622 EFNB3Q15768 340 aa14.77□□□□□ -0.04
LPCAT1-202ENST00000475622 ZCCHC24Q8N2G6 241 aaKnown RBP14.77□□□□□ -0.04
LPCAT1-202ENST00000475622 DPM2O94777 84 aa14.77□□□□□ -0.05
LPCAT1-202ENST00000475622 IGHV4-39P01824 125 aa14.77□□□□□ -0.05
LPCAT1-202ENST00000475622 CCL1P22362 96 aa14.77□□□□□ -0.05
LPCAT1-202ENST00000475622 PAQR4Q8N4S7 273 aaPredicted RBP14.77□□□□□ -0.05
LPCAT1-202ENST00000475622 TRIOBPQ9H2D6 2365 aa14.77□□□□□ -0.05
LPCAT1-202ENST00000475622 IGKV1D-8A0A087WSZ0 117 aa14.77□□□□□ -0.05
LPCAT1-202ENST00000475622 FGF16O43320 207 aa14.77□□□□□ -0.05
LPCAT1-202ENST00000475622 OR9G9P0C7N8 305 aa14.77□□□□□ -0.05
LPCAT1-202ENST00000475622 SAMD13Q5VXD3 122 aa14.77□□□□□ -0.05
LPCAT1-202ENST00000475622 COLCA1Q6ZS62 124 aa14.77□□□□□ -0.05
LPCAT1-202ENST00000475622 PEMTQ9UBM1 199 aa14.76□□□□□ -0.05
LPCAT1-202ENST00000475622 MYOD1P15172 320 aa14.76□□□□□ -0.05
LPCAT1-202ENST00000475622 VWCEQ96DN2 955 aa14.76□□□□□ -0.05
LPCAT1-202ENST00000475622 PAX2Q02962 417 aa14.76□□□□□ -0.05
LPCAT1-202ENST00000475622 CYSLTR1Q9Y271 337 aa14.76□□□□□ -0.05
LPCAT1-202ENST00000475622 RHOGP84095 191 aa14.76□□□□□ -0.05
LPCAT1-202ENST00000475622 TMEM42Q69YG0 159 aa14.76□□□□□ -0.05
LPCAT1-202ENST00000475622 TMEM167AQ8TBQ9 72 aa14.76□□□□□ -0.05
LPCAT1-202ENST00000475622 GTF3AQ92664 365 aaKnown RBP14.76□□□□□ -0.05
LPCAT1-202ENST00000475622 NXT2Q9NPJ8 142 aaKnown RBP14.76□□□□□ -0.05
LPCAT1-202ENST00000475622 TEX38Q6PEX7 206 aa14.75□□□□□ -0.05
LPCAT1-202ENST00000475622 VSIRQ9H7M9 311 aa14.75□□□□□ -0.05
LPCAT1-202ENST00000475622 A0A0A6YYD4 124 aa14.75□□□□□ -0.05
LPCAT1-202ENST00000475622 PRCDQ00LT1 54 aa14.75□□□□□ -0.05
LPCAT1-202ENST00000475622 STRCP1A6NGW2 1772 aa14.75□□□□□ -0.05
LPCAT1-202ENST00000475622 TRAV21A0A0B4J279 112 aa14.75□□□□□ -0.05
LPCAT1-202ENST00000475622 EVI2AP22794 236 aa14.75□□□□□ -0.05
LPCAT1-202ENST00000475622 DUTP33316 252 aaKnown RBP14.75□□□□□ -0.05
LPCAT1-202ENST00000475622 WDR83OSQ9Y284 106 aa14.75□□□□□ -0.05
LPCAT1-202ENST00000475622 ABCA1O95477 2261 aa14.75□□□□□ -0.05
LPCAT1-202ENST00000475622 LYPD3O95274 346 aa14.75□□□□□ -0.05
LPCAT1-202ENST00000475622 LDLRAD2Q5SZI1 272 aa14.75□□□□□ -0.05
LPCAT1-202ENST00000475622 SPOCK3Q9BQ16 436 aa14.75□□□□□ -0.05
LPCAT1-202ENST00000475622 MALP21145 153 aa14.74□□□□□ -0.05
LPCAT1-202ENST00000475622 IGLV3-12A0A075B6K2 115 aa14.74□□□□□ -0.05
LPCAT1-202ENST00000475622 GNB1LQ9BYB4 327 aa14.74□□□□□ -0.05
LPCAT1-202ENST00000475622 TRAV2A0A0B4J234 112 aa14.74□□□□□ -0.05
LPCAT1-202ENST00000475622 PPBPP02775 128 aa14.74□□□□□ -0.05
LPCAT1-202ENST00000475622 RNF182Q8N6D2 247 aa14.74□□□□□ -0.05
LPCAT1-202ENST00000475622 SPTBN1Q01082 2364 aaKnown RBP14.74□□□□□ -0.05
LPCAT1-202ENST00000475622 MBD3L1Q8WWY6 194 aa14.74□□□□□ -0.05
LPCAT1-202ENST00000475622 LYNX1G3V0Z9 82 aa14.73□□□□□ -0.05
LPCAT1-202ENST00000475622 IGLV3-19P01714 112 aa14.73□□□□□ -0.05
LPCAT1-202ENST00000475622 LYNX1P0DP58 116 aa14.73□□□□□ -0.05
LPCAT1-202ENST00000475622 KIR3DL3Q8N743 410 aa14.73□□□□□ -0.05
LPCAT1-202ENST00000475622 SEPSECSQ9HD40 501 aaKnown RBP14.73□□□□□ -0.05
LPCAT1-202ENST00000475622 HEPN1Q6WQI6 88 aa14.73□□□□□ -0.05
LPCAT1-202ENST00000475622 STHQ8IWL8 128 aa14.73□□□□□ -0.05
LPCAT1-202ENST00000475622 GFI1Q99684 422 aa14.73□□□□□ -0.05
LPCAT1-202ENST00000475622 SCN8AQ9UQD0 1980 aa14.73□□□□□ -0.05
LPCAT1-202ENST00000475622 PRB4P10163 310 aaPredicted RBP14.73□□□□□ -0.05
LPCAT1-202ENST00000475622 ORAOV1Q8WV07 137 aa14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 HIST1H2BLQ99880 126 aa14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 J3QRE1 110 aa14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 HOXA3O43365 443 aaPredicted RBP14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 MPZP25189 248 aa14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 ORMDL2Q53FV1 153 aa14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 TSKUQ8WUA8 353 aa14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 CHTOPQ9Y3Y2 248 aaKnown RBP14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 TRAV5A0A0B4J249 113 aa14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 ZNF815PA8K554 130 aa14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 SLC25A20O43772 301 aa14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 SPTBN2O15020 2390 aa14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 OR10W1Q8NGF6 305 aa14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 ADAMTS7Q9UKP4 1686 aa14.72□□□□□ -0.05
LPCAT1-202ENST00000475622 UBE2CO00762 179 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms