RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 HSPE1P61604 102 aaKnown RBP9.06□□□□□ -0.96
SKA3-206ENST00000475251 LPCAT3Q6P1A2 487 aa9.06□□□□□ -0.96
SKA3-206ENST00000475251 ZNF767PQ75MW2 155 aa9.06□□□□□ -0.96
SKA3-206ENST00000475251 SLC25A38Q96DW6 304 aa9.06□□□□□ -0.96
SKA3-206ENST00000475251 A0A1B0GU03 582 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 TEX48A0A1B0GUV7 120 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 TMEM189A5PLL7 270 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 HELTA6NFD8 242 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 TMEM127O75204 238 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 TMEM50AO95807 157 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 CD74P04233 296 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 SPART-AS1P0CW21 52 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 CRYBB3P26998 211 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 SUB1P53999 127 aaKnown RBP eCLIP9.05□□□□□ -0.96
SKA3-206ENST00000475251 IDNKQ5T6J7 187 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 Q6ZR54 194 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 OR5H2Q8NGV7 314 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 OR6F1Q8NGZ6 308 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 DCANP1Q8TF63 244 aa9.05□□□□□ -0.96
SKA3-206ENST00000475251 PKD1P98161 4303 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 MEIS3P1A6NDR6 274 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 PSMB9P28065 219 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 SDC2P34741 201 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 RFX2P48378 723 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 SNRPD3P62318 126 aaKnown RBP9.04□□□□□ -0.96
SKA3-206ENST00000475251 RNF212Q495C1 297 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 C1orf134Q5TEV5 83 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 Q6ZRM9 215 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 ZNF575Q86XF7 245 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 OR5H6Q8NGV6 325 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 FCGR1BQ92637 280 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 TMEM230Q96A57 120 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 SEC22AQ96IW7 307 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 VCX3BQ9H321 246 aa9.04□□□□□ -0.96
SKA3-206ENST00000475251 IGLV2-18A0A075B6J9 118 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 SMIM9A6NGZ8 99 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 INS-IGF2F8WCM5 200 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 CLN5O75503 358 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 PMP2P02689 132 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 HSPA13P48723 471 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 GABARAPL2P60520 117 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 MXD1Q05195 221 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 DHRS2Q13268 280 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 PSMG4Q5JS54 123 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 SLC35G3Q8N808 338 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 S100A16Q96FQ6 103 aaKnown RBP9.03□□□□□ -0.96
SKA3-206ENST00000475251 CNBD2Q96M20 576 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 RAB40CQ96S21 281 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 NEU1Q99519 415 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 PDCD10Q9BUL8 212 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 KRTAP4-5Q9BYR2 181 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 FXYD6Q9H0Q3 95 aa9.03□□□□□ -0.96
SKA3-206ENST00000475251 TRAV30A0A087WSZ9 112 aa9.02□□□□□ -0.97
SKA3-206ENST00000475251 CDK2AP2O75956 126 aa9.02□□□□□ -0.97
SKA3-206ENST00000475251 PHLDA2Q53GA4 152 aa9.02□□□□□ -0.97
SKA3-206ENST00000475251 TBC1D26Q86UD7 250 aa9.02□□□□□ -0.97
SKA3-206ENST00000475251 OR4X1Q8NH49 305 aa9.02□□□□□ -0.97
SKA3-206ENST00000475251 MRGPRFQ96AM1 343 aa9.02□□□□□ -0.97
SKA3-206ENST00000475251 RNF167Q9H6Y7 350 aa9.02□□□□□ -0.97
SKA3-206ENST00000475251 SEPSECSQ9HD40 501 aaKnown RBP9.02□□□□□ -0.97
SKA3-206ENST00000475251 XCL2Q9UBD3 114 aa9.02□□□□□ -0.97
SKA3-206ENST00000475251 ANAPC10Q9UM13 185 aa9.02□□□□□ -0.97
SKA3-206ENST00000475251 AGRNO00468 2067 aa9.01□□□□□ -0.97
SKA3-206ENST00000475251 C16orf90A8MZG2 172 aa9.01□□□□□ -0.97
SKA3-206ENST00000475251 ATG12O94817 140 aa9.01□□□□□ -0.97
SKA3-206ENST00000475251 NAT1P18440 290 aa9.01□□□□□ -0.97
SKA3-206ENST00000475251 OPRK1P41145 380 aa9.01□□□□□ -0.97
SKA3-206ENST00000475251 TSPAN5P62079 268 aa9.01□□□□□ -0.97
SKA3-206ENST00000475251 NRG4Q8WWG1 115 aa9.01□□□□□ -0.97
SKA3-206ENST00000475251 SCRT1Q9BWW7 348 aa9.01□□□□□ -0.97
SKA3-206ENST00000475251 ENY2Q9NPA8 101 aa9.01□□□□□ -0.97
SKA3-206ENST00000475251 RPS10-NUDT3A0A1W2PQS6 291 aa9□□□□□ -0.97
SKA3-206ENST00000475251 HNRNPCP07910 306 aaKnown RBP eCLIP9□□□□□ -0.97
SKA3-206ENST00000475251 RPL5P46777 297 aaKnown RBP9□□□□□ -0.97
SKA3-206ENST00000475251 HOXA1P49639 335 aaPredicted RBP9□□□□□ -0.97
SKA3-206ENST00000475251 PPP5CP53041 499 aa9□□□□□ -0.97
SKA3-206ENST00000475251 FAM3BP58499 235 aaPredicted RBP9□□□□□ -0.97
SKA3-206ENST00000475251 TMEM69Q5SWH9 247 aa9□□□□□ -0.97
SKA3-206ENST00000475251 ZNF705AQ6ZN79 300 aaPredicted RBP9□□□□□ -0.97
SKA3-206ENST00000475251 CROCCP3Q8IVE0 287 aa9□□□□□ -0.97
SKA3-206ENST00000475251 MAPKAPK5-AS1Q8N8E1 139 aa9□□□□□ -0.97
SKA3-206ENST00000475251 RFNGQ9Y644 331 aa9□□□□□ -0.97
SKA3-206ENST00000475251 H3BMM0 161 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 GSTZ1O43708 216 aaPredicted RBP8.99□□□□□ -0.97
SKA3-206ENST00000475251 IGKV1-39P01597 117 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 IGKV1D-39P04432 117 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 CLEC2LP0C7M8 214 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 HRH1P35367 487 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 AKR1C2P52895 323 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 EMP1P54849 157 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 TAS2R20P59543 309 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 OXA1LQ15070 435 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 SPINK9Q5DT21 86 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 C16orf54Q6UWD8 224 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 SPARTQ8N0X7 666 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 Q8WTZ3 238 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 NIPSNAP3BQ9BS92 247 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 NRN1Q9NPD7 142 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 TMED3Q9Y3Q3 217 aa8.99□□□□□ -0.97
SKA3-206ENST00000475251 U3KQE9 123 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms