RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 GNG7O60262 68 aa14.26□□□□□ -0.13
PTCD3-210ENST00000473829 PITX3O75364 302 aa14.26□□□□□ -0.13
PTCD3-210ENST00000473829 ANXA7P20073 488 aaKnown RBP14.26□□□□□ -0.13
PTCD3-210ENST00000473829 OPRK1P41145 380 aa14.26□□□□□ -0.13
PTCD3-210ENST00000473829 ELLP55199 621 aaPredicted RBP14.26□□□□□ -0.13
PTCD3-210ENST00000473829 C2orf83Q53S99 150 aa14.26□□□□□ -0.13
PTCD3-210ENST00000473829 LINC00299Q6ZSB3 139 aa14.26□□□□□ -0.13
PTCD3-210ENST00000473829 OR1S1Q8NH92 325 aa14.26□□□□□ -0.13
PTCD3-210ENST00000473829 C20orf24Q9BUV8 137 aa14.26□□□□□ -0.13
PTCD3-210ENST00000473829 HUWE1Q7Z6Z7 4374 aaKnown RBP14.25□□□□□ -0.13
PTCD3-210ENST00000473829 FRMD6-AS1P0C7T7 363 aa14.25□□□□□ -0.13
PTCD3-210ENST00000473829 IGHV4-30-4P0DP06 118 aa14.25□□□□□ -0.13
PTCD3-210ENST00000473829 DUSP18Q8NEJ0 188 aa14.25□□□□□ -0.13
PTCD3-210ENST00000473829 DTD1Q8TEA8 209 aa14.25□□□□□ -0.13
PTCD3-210ENST00000473829 CCDC32Q9BV29 185 aa14.25□□□□□ -0.13
PTCD3-210ENST00000473829 DAZ1Q9NQZ3 744 aaKnown RBP14.25□□□□□ -0.13
PTCD3-210ENST00000473829 PTTG2Q9NZH5 202 aa14.25□□□□□ -0.13
PTCD3-210ENST00000473829 MRPL27Q9P0M9 148 aaKnown RBP14.25□□□□□ -0.13
PTCD3-210ENST00000473829 HOXB5P09067 269 aa14.24□□□□□ -0.13
PTCD3-210ENST00000473829 OR4E1P0C645 316 aa14.24□□□□□ -0.13
PTCD3-210ENST00000473829 NPY1RP25929 384 aa14.24□□□□□ -0.13
PTCD3-210ENST00000473829 RELQ04864 619 aaPredicted RBP14.24□□□□□ -0.13
PTCD3-210ENST00000473829 DHRS2Q13268 280 aa14.24□□□□□ -0.13
PTCD3-210ENST00000473829 MARC2Q969Z3 335 aa14.24□□□□□ -0.13
PTCD3-210ENST00000473829 CACFD1Q9UGQ2 172 aa14.24□□□□□ -0.13
PTCD3-210ENST00000473829 PIGBOS1A0A0B4J2F0 54 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 ADAP1O75689 374 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 TMEM50AO95807 157 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 CD7P09564 240 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 SLC25A6P12236 298 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 NPBWR1P48145 328 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 GUCA2BQ16661 112 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 GGNBP1Q5YKI7 109 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 LYG2Q86SG7 212 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 GTSCR1Q86UQ5 136 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 SBSPONQ8IVN8 264 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 OR10C1Q96KK4 312 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 C20orf85Q9H1P6 137 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 HIPK2Q9H2X6 1198 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 TMED3Q9Y3Q3 217 aa14.23□□□□□ -0.13
PTCD3-210ENST00000473829 C15orf62A8K5M9 175 aa14.22□□□□□ -0.13
PTCD3-210ENST00000473829 MPTX1A8MV57 137 aa14.22□□□□□ -0.13
PTCD3-210ENST00000473829 K7EMT4 169 aa14.22□□□□□ -0.13
PTCD3-210ENST00000473829 CLN5O75503 358 aa14.22□□□□□ -0.13
PTCD3-210ENST00000473829 YIF1AO95070 293 aa14.22□□□□□ -0.13
PTCD3-210ENST00000473829 SCAF4O95104 1147 aaKnown RBP14.22□□□□□ -0.13
PTCD3-210ENST00000473829 CD81P60033 236 aa14.22□□□□□ -0.13
PTCD3-210ENST00000473829 OR52B4Q8NGK2 314 aa14.22□□□□□ -0.13
PTCD3-210ENST00000473829 OR4X1Q8NH49 305 aa14.22□□□□□ -0.13
PTCD3-210ENST00000473829 RNASEH2CQ8TDP1 164 aaKnown RBP14.22□□□□□ -0.13
PTCD3-210ENST00000473829 S100ZQ8WXG8 99 aa14.22□□□□□ -0.13
PTCD3-210ENST00000473829 WFDC10AQ9H1F0 79 aa14.22□□□□□ -0.13
PTCD3-210ENST00000473829 C19orf73Q9NVV2 129 aa14.22□□□□□ -0.13
PTCD3-210ENST00000473829 TBC1D24Q9ULP9 559 aa14.22□□□□□ -0.13
PTCD3-210ENST00000473829 A8MZ25 164 aa14.21□□□□□ -0.13
PTCD3-210ENST00000473829 IFNA10P01566 189 aa14.21□□□□□ -0.13
PTCD3-210ENST00000473829 C4orf46Q504U0 113 aa14.21□□□□□ -0.13
PTCD3-210ENST00000473829 PRSS54Q6PEW0 395 aa14.21□□□□□ -0.13
PTCD3-210ENST00000473829 TOMM20LQ6UXN7 152 aa14.21□□□□□ -0.13
PTCD3-210ENST00000473829 NEURL2Q9BR09 285 aa14.21□□□□□ -0.13
PTCD3-210ENST00000473829 ZFAND3Q9H8U3 227 aa14.21□□□□□ -0.13
PTCD3-210ENST00000473829 IGHV3-49A0A0A0MS15 119 aa14.2□□□□□ -0.14
PTCD3-210ENST00000473829 IGKV1-17P01599 117 aa14.2□□□□□ -0.14
PTCD3-210ENST00000473829 TCRBP04435 133 aa14.2□□□□□ -0.14
PTCD3-210ENST00000473829 IAPPP10997 89 aa14.2□□□□□ -0.14
PTCD3-210ENST00000473829 RND2P52198 227 aa14.2□□□□□ -0.14
PTCD3-210ENST00000473829 PUS1Q9Y606 427 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTCD3-210ENST00000473829 U3KQ87 197 aa14.2□□□□□ -0.14
PTCD3-210ENST00000473829 TRAV6A0A075B6T7 132 aa14.19□□□□□ -0.14
PTCD3-210ENST00000473829 IGHV7-4-1A0A0J9YVY3 117 aa14.19□□□□□ -0.14
PTCD3-210ENST00000473829 RPS10-NUDT3A0A1W2PQS6 291 aa14.19□□□□□ -0.14
PTCD3-210ENST00000473829 FAM90A26D6RGX4 464 aa14.19□□□□□ -0.14
PTCD3-210ENST00000473829 NHLRC4P0CG21 123 aaPredicted RBP14.19□□□□□ -0.14
PTCD3-210ENST00000473829 TIGITQ495A1 244 aa14.19□□□□□ -0.14
PTCD3-210ENST00000473829 ZNF600Q6ZNG1 722 aa14.19□□□□□ -0.14
PTCD3-210ENST00000473829 COQ8AQ8NI60 647 aa14.19□□□□□ -0.14
PTCD3-210ENST00000473829 MAGT1Q9H0U3 335 aa14.19□□□□□ -0.14
PTCD3-210ENST00000473829 SMPXQ9UHP9 88 aa14.19□□□□□ -0.14
PTCD3-210ENST00000473829 IGHV3OR16-13A0A075B7E8 117 aa14.18□□□□□ -0.14
PTCD3-210ENST00000473829 IGHV3-74A0A0B4J1X5 117 aa14.18□□□□□ -0.14
PTCD3-210ENST00000473829 TRAV25A0A0B4J276 109 aa14.18□□□□□ -0.14
PTCD3-210ENST00000473829 CHEK1O14757 476 aa14.18□□□□□ -0.14
PTCD3-210ENST00000473829 IGLC1P0CG04 106 aa14.18□□□□□ -0.14
PTCD3-210ENST00000473829 DEFB125Q8N687 156 aa14.18□□□□□ -0.14
PTCD3-210ENST00000473829 TMEM116Q8NCL8 245 aa14.18□□□□□ -0.14
PTCD3-210ENST00000473829 RNF2Q99496 336 aa14.18□□□□□ -0.14
PTCD3-210ENST00000473829 BATF3Q9NR55 127 aa14.18□□□□□ -0.14
PTCD3-210ENST00000473829 NUDT15Q9NV35 164 aa14.18□□□□□ -0.14
PTCD3-210ENST00000473829 APOHP02749 345 aaPredicted RBP14.17□□□□□ -0.14
PTCD3-210ENST00000473829 SLC25A4P12235 298 aa14.17□□□□□ -0.14
PTCD3-210ENST00000473829 IFITM3Q01628 133 aa14.17□□□□□ -0.14
PTCD3-210ENST00000473829 ZNF846Q147U1 533 aa14.17□□□□□ -0.14
PTCD3-210ENST00000473829 RBPMS2Q6ZRY4 209 aaKnown RBP14.17□□□□□ -0.14
PTCD3-210ENST00000473829 SLC16A13Q7RTY0 426 aa14.17□□□□□ -0.14
PTCD3-210ENST00000473829 NOXA1Q86UR1 476 aa14.17□□□□□ -0.14
PTCD3-210ENST00000473829 MITD1Q8WV92 249 aa14.17□□□□□ -0.14
PTCD3-210ENST00000473829 RHPN1-AS1Q9BWJ2 59 aa14.17□□□□□ -0.14
PTCD3-210ENST00000473829 WDR12Q9GZL7 423 aaKnown RBP14.17□□□□□ -0.14
PTCD3-210ENST00000473829 TRAV14DV4A0A0A6YYC5 116 aa14.16□□□□□ -0.14
PTCD3-210ENST00000473829 TSPAN4O14817 238 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms