RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 INPP1P49441 399 aa11.35□□□□□ -0.59
CALD1-215ENST00000472096 SUB1P53999 127 aaKnown RBP eCLIP11.35□□□□□ -0.59
CALD1-215ENST00000472096 RBMS2Q15434 407 aaKnown RBP11.35□□□□□ -0.59
CALD1-215ENST00000472096 TMEM128Q5BJH2 165 aa11.35□□□□□ -0.59
CALD1-215ENST00000472096 BTNL8Q6UX41 500 aa11.35□□□□□ -0.59
CALD1-215ENST00000472096 TMEM61Q8N0U2 210 aa11.35□□□□□ -0.59
CALD1-215ENST00000472096 LGI3Q8N145 548 aa11.35□□□□□ -0.59
CALD1-215ENST00000472096 DAZ1Q9NQZ3 744 aaKnown RBP11.35□□□□□ -0.59
CALD1-215ENST00000472096 MRPL27Q9P0M9 148 aaKnown RBP11.35□□□□□ -0.59
CALD1-215ENST00000472096 SELENOKQ9Y6D0 94 aa11.35□□□□□ -0.59
CALD1-215ENST00000472096 ZNF785A8K8V0 405 aa11.34□□□□□ -0.59
CALD1-215ENST00000472096 RGS13O14921 159 aa11.34□□□□□ -0.59
CALD1-215ENST00000472096 NUPL2O15504 423 aaKnown RBP11.34□□□□□ -0.59
CALD1-215ENST00000472096 NXPH3O95157 252 aa11.34□□□□□ -0.59
CALD1-215ENST00000472096 CCR6P51684 374 aa11.34□□□□□ -0.59
CALD1-215ENST00000472096 CD81P60033 236 aa11.34□□□□□ -0.59
CALD1-215ENST00000472096 RELQ04864 619 aaPredicted RBP11.34□□□□□ -0.59
CALD1-215ENST00000472096 LYZL2Q7Z4W2 148 aa11.34□□□□□ -0.59
CALD1-215ENST00000472096 SBSPONQ8IVN8 264 aa11.34□□□□□ -0.59
CALD1-215ENST00000472096 C19orf73Q9NVV2 129 aa11.34□□□□□ -0.59
CALD1-215ENST00000472096 IGHV3OR16-8A0A075B7F1 116 aa11.33□□□□□ -0.6
CALD1-215ENST00000472096 DUXBA0A1W2PPF3 345 aa11.33□□□□□ -0.6
CALD1-215ENST00000472096 NAP1L6A6NFF2 107 aa11.33□□□□□ -0.6
CALD1-215ENST00000472096 CEBPZOSA8MTT3 80 aa11.33□□□□□ -0.6
CALD1-215ENST00000472096 GNG7O60262 68 aa11.33□□□□□ -0.6
CALD1-215ENST00000472096 HTR2BP41595 481 aa11.33□□□□□ -0.6
CALD1-215ENST00000472096 PPP1R1AQ13522 171 aa11.33□□□□□ -0.6
CALD1-215ENST00000472096 SMCO1Q147U7 214 aa11.33□□□□□ -0.6
CALD1-215ENST00000472096 GUCA2BQ16661 112 aa11.33□□□□□ -0.6
CALD1-215ENST00000472096 CENPSQ8N2Z9 138 aa11.33□□□□□ -0.6
CALD1-215ENST00000472096 C20orf24Q9BUV8 137 aa11.33□□□□□ -0.6
CALD1-215ENST00000472096 FNDC4Q9H6D8 234 aaPredicted RBP11.33□□□□□ -0.6
CALD1-215ENST00000472096 HEYLQ9NQ87 328 aaPredicted RBP11.33□□□□□ -0.6
CALD1-215ENST00000472096 CACFD1Q9UGQ2 172 aa11.33□□□□□ -0.6
CALD1-215ENST00000472096 U3KQK5 164 aa11.33□□□□□ -0.6
CALD1-215ENST00000472096 PIGBOS1A0A0B4J2F0 54 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 C15orf62A8K5M9 175 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 SFT2D2O95562 160 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 CD7P09564 240 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 IL7P13232 177 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 OPRK1P41145 380 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 NPBWR1P48145 328 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 ANKRD55Q3KP44 614 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 C2orf83Q53S99 150 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 LRTM2Q8N967 370 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 DUSP18Q8NEJ0 188 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 SLC24A4Q8NFF2 622 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 NEURL2Q9BR09 285 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 HSPB7Q9UBY9 170 aa11.32□□□□□ -0.6
CALD1-215ENST00000472096 LINC00854A0A1B0GVQ3 168 aa11.31□□□□□ -0.6
CALD1-215ENST00000472096 K7EMT4 169 aa11.31□□□□□ -0.6
CALD1-215ENST00000472096 ZNF207O43670 478 aaKnown RBP11.31□□□□□ -0.6
CALD1-215ENST00000472096 SCAF4O95104 1147 aaKnown RBP11.31□□□□□ -0.6
CALD1-215ENST00000472096 NDUFB6O95139 128 aa11.31□□□□□ -0.6
CALD1-215ENST00000472096 BTCP35070 178 aa11.31□□□□□ -0.6
CALD1-215ENST00000472096 UBE2MP61081 183 aaKnown RBP11.31□□□□□ -0.6
CALD1-215ENST00000472096 TNFRSF9Q07011 255 aa11.31□□□□□ -0.6
CALD1-215ENST00000472096 TMEM170AQ8WVE7 144 aa11.31□□□□□ -0.6
CALD1-215ENST00000472096 C7orf50Q9BRJ6 194 aaKnown RBP11.31□□□□□ -0.6
CALD1-215ENST00000472096 MRPL36Q9P0J6 103 aaKnown RBP11.31□□□□□ -0.6
CALD1-215ENST00000472096 TRAV25A0A0B4J276 109 aa11.3□□□□□ -0.6
CALD1-215ENST00000472096 A0A1B0GU03 582 aa11.3□□□□□ -0.6
CALD1-215ENST00000472096 OR1S1Q8NH92 325 aa11.3□□□□□ -0.6
CALD1-215ENST00000472096 OR10C1Q96KK4 312 aa11.3□□□□□ -0.6
CALD1-215ENST00000472096 WFDC10AQ9H1F0 79 aa11.3□□□□□ -0.6
CALD1-215ENST00000472096 RPS10-NUDT3A0A1W2PQS6 291 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 CENPXA8MT69 81 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 PITX3O75364 302 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 CLN5O75503 358 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 YIF1AO95070 293 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 TMEM50AO95807 157 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 NPY1RP25929 384 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 RBPMS2Q6ZRY4 209 aaKnown RBP11.29□□□□□ -0.6
CALD1-215ENST00000472096 SLC16A13Q7RTY0 426 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 OR4X1Q8NH49 305 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 RNASEH2CQ8TDP1 164 aaKnown RBP11.29□□□□□ -0.6
CALD1-215ENST00000472096 DTD1Q8TEA8 209 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 WWC2-AS2Q96NR7 200 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 TM2D3Q9BRN9 247 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 HIPK2Q9H2X6 1198 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 RBKSQ9H477 322 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 TUBA4BQ9H853 241 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 FLVCR2Q9UPI3 526 aa11.29□□□□□ -0.6
CALD1-215ENST00000472096 IGHV7-4-1A0A0J9YVY3 117 aa11.28□□□□□ -0.6
CALD1-215ENST00000472096 SLC25A6P12236 298 aa11.28□□□□□ -0.6
CALD1-215ENST00000472096 MLANAQ16655 118 aa11.28□□□□□ -0.6
CALD1-215ENST00000472096 TOMM20LQ6UXN7 152 aa11.28□□□□□ -0.6
CALD1-215ENST00000472096 ZNF600Q6ZNG1 722 aa11.28□□□□□ -0.6
CALD1-215ENST00000472096 DEFB125Q8N687 156 aa11.28□□□□□ -0.6
CALD1-215ENST00000472096 OR52B4Q8NGK2 314 aa11.28□□□□□ -0.6
CALD1-215ENST00000472096 RCHY1Q96PM5 261 aa11.28□□□□□ -0.6
CALD1-215ENST00000472096 SPAG8Q99932 426 aaPredicted RBP11.28□□□□□ -0.6
CALD1-215ENST00000472096 SMPXQ9UHP9 88 aa11.28□□□□□ -0.6
CALD1-215ENST00000472096 TMED3Q9Y3Q3 217 aa11.28□□□□□ -0.6
CALD1-215ENST00000472096 STAB2Q8WWQ8 2551 aa11.28□□□□□ -0.6
CALD1-215ENST00000472096 TENM3Q9P273 2699 aa11.28□□□□□ -0.6
CALD1-215ENST00000472096 C9orf170A2RU37 121 aa11.27□□□□□ -0.61
CALD1-215ENST00000472096 OR11H12B2RN74 326 aa11.27□□□□□ -0.61
CALD1-215ENST00000472096 CHEK1O14757 476 aa11.27□□□□□ -0.61
CALD1-215ENST00000472096 TSPAN4O14817 238 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms