RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CYSLTR1Q9Y271 337 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 SLC35A3Q9Y2D2 325 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 NUBP2Q9Y5Y2 271 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 ROCK2O75116 1388 aaKnown RBP1.54□□□□□ -2.16
BRCA2-202ENST00000470094 PPIP5K1Q6PFW1 1433 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 TOPBP1Q92547 1522 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 ZNF106Q9H2Y7 1883 aaKnown RBP1.54□□□□□ -2.16
BRCA2-202ENST00000470094 DENND4CQ5VZ89 1909 aa1.54□□□□□ -2.16
BRCA2-202ENST00000470094 IGHV1-18A0A0C4DH31 117 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 A0A0G2JQZ4 141 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 IRGMA1A4Y4 181 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 GGT3PA6NGU5 568 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 G3V2T6 193 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 H7C2G1 150 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 AIPO00170 330 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 ADGRB3O60242 1522 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 IFNA7P01567 189 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 IFNA21P01568 189 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 IGHV3-7P01780 117 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 MSMBP08118 114 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 NBEAP1P0C6P0 100 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 PHBP35232 272 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 ATP5G3P48201 142 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 HINT1P49773 126 aaPredicted RBP1.53□□□□□ -2.16
BRCA2-202ENST00000470094 NCALDP61601 193 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 RHOBP62745 196 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 PRDM2Q13029 1718 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 SPANXN3Q5MJ09 141 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 AKR1C8PQ5T2L2 129 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 AADACL3Q5VUY0 350 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 Q6ZTI0 123 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 STX19Q8N4C7 294 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 Q8NDZ9 215 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 PYDC1Q8WXC3 89 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 RMND5BQ96G75 393 aaPredicted RBP1.53□□□□□ -2.16
BRCA2-202ENST00000470094 TMEM70Q9BUB7 260 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 TRPM6Q9BX84 2022 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 TTTY12Q9BZ98 90 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 PBOV1Q9GZY1 135 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 CXCL16Q9H2A7 254 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 ERGIC3Q9Y282 383 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 PLXND1Q9Y4D7 1925 aa1.53□□□□□ -2.16
BRCA2-202ENST00000470094 ECM29Q5VYK3 1845 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 UHRF1BP1Q6BDS2 1440 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 SETD5Q9C0A6 1442 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 KIF24Q5T7B8 1368 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 TMSB15BA0A087X1C1 80 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 PVALEFA0A1B0GWK0 134 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 FUOMA2VDF0 154 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 RFPL4AA6NLU0 287 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 RFPL4AL1F8VTS6 287 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 BUB1B-PAK6H3BSN5 160 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 H7C1C5 153 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 J3QKU1 62 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 SLC22A1O15245 554 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 NDUFC2O95298 119 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 CRHP06850 196 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 ZNF80P51504 273 aaPredicted RBP1.52□□□□□ -2.17
BRCA2-202ENST00000470094 EMP1P54849 157 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 RAB4BP61018 213 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 LCN6P62502 163 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 CCDC58Q4VC31 144 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 TOMM20LQ6UXN7 152 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 IDO2Q6ZQW0 420 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 LCA10Q71F78 164 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 C10orf126Q8N4M7 172 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 C12orf29Q8N999 325 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 ZNF439Q8NDP4 499 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 SLC25A40Q8TBP6 338 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 PLEKHB2Q96CS7 222 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 LYSMD1Q96S90 227 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 IMUPQ9GZP8 106 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 SS18L2Q9UHA2 77 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 NDUFAF1Q9Y375 327 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 SCN10AQ9Y5Y9 1956 aa1.52□□□□□ -2.17
BRCA2-202ENST00000470094 CCDC180Q9P1Z9 1646 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 ARRDC5A6NEK1 342 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 PRORSD1PA6NEY8 169 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 ORC5O43913 435 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 PIAS1O75925 651 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 DEFA4P12838 97 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 PEBP1P30086 187 aaKnown RBP1.51□□□□□ -2.17
BRCA2-202ENST00000470094 PIGPP57054 158 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 CDC42P60953 191 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 GNG5P63218 68 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 ERHP84090 104 aaKnown RBP1.51□□□□□ -2.17
BRCA2-202ENST00000470094 KISS1Q15726 138 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 TPRXLQ17RH7 258 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 SCGB2B2Q4G0G5 96 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 KTN1-AS1Q86SY8 53 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 NUP35Q8NFH5 326 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 TERB2Q8NHR7 220 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 MALSU1Q96EH3 234 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 GPER1Q99527 375 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 SERPINI1Q99574 410 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 TMEM133Q9H2Q1 129 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 SSR3Q9UNL2 185 aa1.51□□□□□ -2.17
BRCA2-202ENST00000470094 AMMECR1Q9Y4X0 333 aaPredicted RBP1.51□□□□□ -2.17
BRCA2-202ENST00000470094 SCN9AQ15858 1988 aa1.5□□□□□ -2.17
BRCA2-202ENST00000470094 ARAP1Q96P48 1450 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms