RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ZNF492Q9P255 531 aa7.38□□□□□ -1.23
SMARCE1-207ENST00000469334 AMMECR1Q9Y4X0 333 aaPredicted RBP7.38□□□□□ -1.23
SMARCE1-207ENST00000469334 ZNF407Q9C0G0 2248 aa7.38□□□□□ -1.23
SMARCE1-207ENST00000469334 TET2Q6N021 2002 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 IGLV3-12A0A075B6K2 115 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 C10orf142B7Z368 130 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 ACTL6BO94805 426 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 DSCR4P56555 118 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 ERVK11-1P61568 191 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 C1orf53Q5VUE5 145 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 RBPMS2Q6ZRY4 209 aaKnown RBP7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 C8orf46Q8TAG6 207 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 FGFBP3Q8TAT2 258 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 TMUB1Q9BVT8 246 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 OCIAD1Q9NX40 245 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 TCF19Q9Y242 345 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 INSIG2Q9Y5U4 225 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 ADAMTS20P59510 1910 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 USF3Q68DE3 2245 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 E9PLD3 99 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 MGST3O14880 152 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 KIR2DS2P43631 304 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 PPP1R32Q7Z5V6 425 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 RPRMLQ8N4K4 120 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 PSG8Q9UQ74 426 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 POLDIP2Q9Y2S7 368 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 SEC16AO15027 2179 aa7.37□□□□□ -1.23
SMARCE1-207ENST00000469334 LOC102723996A0A087X1L8 192 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 LINC00473A8K010 186 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 NGFP01138 241 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 SP1P08047 785 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 ATP5IP56385 69 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 UBE2L3P68036 154 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 ZNF146Q15072 292 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 INO80CQ6PI98 192 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 C1orf122Q6ZSJ8 110 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 ABCA7Q8IZY2 2146 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 GATD1Q8NB37 220 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 PHLDA1Q8WV24 401 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 RLN3Q8WXF3 142 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 SLC25A33Q9BSK2 321 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 PRSS22Q9GZN4 317 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 IL23AQ9NPF7 189 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 SELENOKQ9Y6D0 94 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 CHCHD2Q9Y6H1 151 aaPredicted RBP7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 A0A0J9YW62 118 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 ZNF716A6NP11 495 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 C12orf77C9JDV5 145 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 HAX1O00165 279 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 SRSF1Q07955 248 aaKnown RBP eCLIP7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 GAGE5Q13069 117 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 GAGE6Q13070 117 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 WFDC2Q14508 124 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 OR1C1Q15619 314 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 ZNF329Q86UD4 541 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 RPS19BP1Q86WX3 136 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 ABHD12Q8N2K0 398 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 UBALD1Q8TB05 177 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 MCRIP2Q9BUT9 160 aaKnown RBP7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 SRXN1Q9BYN0 137 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 VCX2Q9H322 139 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 ENY2Q9NPA8 101 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 LINC00312Q9Y6C7 94 aa7.36□□□□□ -1.23
SMARCE1-207ENST00000469334 ESPL1Q14674 2120 aa7.35□□□□□ -1.23
SMARCE1-207ENST00000469334 A0A1B0GW15 77 aa7.35□□□□□ -1.23
SMARCE1-207ENST00000469334 SHISA9B4DS77 424 aa7.35□□□□□ -1.23
SMARCE1-207ENST00000469334 NCR2O95944 276 aa7.35□□□□□ -1.23
SMARCE1-207ENST00000469334 APOHP02749 345 aaPredicted RBP7.35□□□□□ -1.23
SMARCE1-207ENST00000469334 LIFP15018 202 aa7.35□□□□□ -1.23
SMARCE1-207ENST00000469334 C17orf82Q86X59 251 aaPredicted RBP7.35□□□□□ -1.23
SMARCE1-207ENST00000469334 OR9G1Q8NH87 305 aa7.35□□□□□ -1.23
SMARCE1-207ENST00000469334 C15orf61A6NNL5 157 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 VSTM5A8MXK1 200 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 SLC25A17O43808 307 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 P01737 135 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 THBDP07204 575 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 SPINK8P0C7L1 97 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 HLA-DRB4P13762 266 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 GAGE13Q4V321 117 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 SMRP1Q8NCR6 262 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 RTL8AQ9BWD3 113 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 FOXA2Q9Y261 457 aaPredicted RBP7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 KLF12Q9Y4X4 402 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 HLA-DRB4X5D2U9 266 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 C19orf71A6NCJ1 209 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 SRRM4A7MD48 611 aaKnown RBP7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 IGHV4-34P06331 123 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 GCSHP23434 173 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 TAL2Q16559 108 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 ETDBQ3ZM63 59 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 BCL6BQ8N143 479 aaPredicted RBP7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 FAM167A-AS1Q96KT0 104 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 ZNF714Q96N38 554 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 TM2D2Q9BX73 214 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 SLC25A2Q9BXI2 301 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 PLA2G2FQ9BZM2 168 aa7.34□□□□□ -1.23
SMARCE1-207ENST00000469334 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.33□□□□□ -1.24
SMARCE1-207ENST00000469334 TCRBV4S1A1TA0A5B7 111 aa7.33□□□□□ -1.24
SMARCE1-207ENST00000469334 C5orf49A4QMS7 147 aa7.33□□□□□ -1.24
SMARCE1-207ENST00000469334 FBLL1A6NHQ2 334 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms