RNA–Protein interactions for RNA: ENST00000469217.5

PCCB-209, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCCB, Length 1,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-209ENST00000469217 C11orf44Q8N8P7 122 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 SCARB1Q8WTV0 552 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 PCNPQ8WW12 178 aaKnown RBP13.53□□□□□ -0.24
PCCB-209ENST00000469217 FNDC4Q9H6D8 234 aaPredicted RBP13.53□□□□□ -0.24
PCCB-209ENST00000469217 PRSS46E5RG02 174 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 I3L2K1 104 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 K7EIM0 57 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 MT-CO2P00403 227 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 IGHV3-48P01763 117 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 RPL12P30050 165 aaKnown RBP13.53□□□□□ -0.24
PCCB-209ENST00000469217 OPRK1P41145 380 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 EWSR1Q01844 656 aaKnown RBP eCLIP13.53□□□□□ -0.24
PCCB-209ENST00000469217 NHLH2Q02577 135 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 ARL16Q0P5N6 197 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 KIAA0141Q14154 515 aaPredicted RBP13.53□□□□□ -0.24
PCCB-209ENST00000469217 HIST2H2BDQ6DRA6 164 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 ACOT7LQ6ZUV0 252 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 SLC25A31Q9H0C2 315 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 S4R3C0 116 aa13.53□□□□□ -0.24
PCCB-209ENST00000469217 FAM223BA6NKX1 122 aa13.52□□□□□ -0.25
PCCB-209ENST00000469217 BCL2L11O43521 198 aa13.52□□□□□ -0.25
PCCB-209ENST00000469217 CD28P10747 220 aa13.52□□□□□ -0.25
PCCB-209ENST00000469217 SULT1A1P50225 295 aa13.52□□□□□ -0.25
PCCB-209ENST00000469217 KRTAP10-3P60369 221 aa13.52□□□□□ -0.25
PCCB-209ENST00000469217 ALKAL2Q6UX46 152 aa13.52□□□□□ -0.25
PCCB-209ENST00000469217 FAM223AQ8IWN6 122 aa13.52□□□□□ -0.25
PCCB-209ENST00000469217 TMEM217Q8N7C4 229 aa13.52□□□□□ -0.25
PCCB-209ENST00000469217 MFSD2BA6NFX1 497 aa13.51□□□□□ -0.25
PCCB-209ENST00000469217 CD69Q07108 199 aa13.51□□□□□ -0.25
PCCB-209ENST00000469217 STX12Q86Y82 276 aa13.51□□□□□ -0.25
PCCB-209ENST00000469217 OR10P1Q8NGE3 313 aa13.51□□□□□ -0.25
PCCB-209ENST00000469217 MYOZ3Q8TDC0 251 aa13.51□□□□□ -0.25
PCCB-209ENST00000469217 WFDC12Q8WWY7 111 aa13.51□□□□□ -0.25
PCCB-209ENST00000469217 TMEM158Q8WZ71 300 aa13.51□□□□□ -0.25
PCCB-209ENST00000469217 KANTRA0A1W2PQU2 76 aa13.5□□□□□ -0.25
PCCB-209ENST00000469217 COMMD7Q86VX2 200 aa13.5□□□□□ -0.25
PCCB-209ENST00000469217 ZNF491Q8N8L2 437 aa13.5□□□□□ -0.25
PCCB-209ENST00000469217 INO80EQ8NBZ0 244 aaPredicted RBP13.5□□□□□ -0.25
PCCB-209ENST00000469217 BSCL2Q96G97 398 aaPredicted RBP13.5□□□□□ -0.25
PCCB-209ENST00000469217 USMG5Q96IX5 58 aa13.5□□□□□ -0.25
PCCB-209ENST00000469217 AQP10Q96PS8 301 aa13.5□□□□□ -0.25
PCCB-209ENST00000469217 IGHV3-23P01764 117 aa13.5□□□□□ -0.25
PCCB-209ENST00000469217 ATP5G2Q06055 141 aa13.5□□□□□ -0.25
PCCB-209ENST00000469217 ST8SIA2Q92186 375 aa13.5□□□□□ -0.25
PCCB-209ENST00000469217 MRPL36Q9P0J6 103 aaKnown RBP13.5□□□□□ -0.25
PCCB-209ENST00000469217 A0A0G2JLM5 398 aa13.49□□□□□ -0.25
PCCB-209ENST00000469217 IGHV3-11P01762 117 aa13.49□□□□□ -0.25
PCCB-209ENST00000469217 NMBP08949 121 aa13.49□□□□□ -0.25
PCCB-209ENST00000469217 BAXQ07812 192 aa13.49□□□□□ -0.25
PCCB-209ENST00000469217 VN1R17PQ8TDU5 208 aa13.49□□□□□ -0.25
PCCB-209ENST00000469217 CXorf58Q96LI9 332 aa13.49□□□□□ -0.25
PCCB-209ENST00000469217 CITED2Q99967 270 aaPredicted RBP13.49□□□□□ -0.25
PCCB-209ENST00000469217 ZC4H2Q9NQZ6 224 aa13.49□□□□□ -0.25
PCCB-209ENST00000469217 GPX4P36969 197 aaPredicted RBP13.48□□□□□ -0.25
PCCB-209ENST00000469217 NUP62P37198 522 aaPredicted RBP13.48□□□□□ -0.25
PCCB-209ENST00000469217 KHDC1LQ5JSQ8 128 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 SLC16A13Q7RTY0 426 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 OR5C1Q8NGR4 320 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 CACNG8Q8WXS5 425 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 UBE2E2Q96LR5 201 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 TCRBV4S1A1TA0A5B7 111 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 HBG1P69891 147 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 HBG2P69892 147 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 SLC38A11Q08AI6 406 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 ETFRF1Q6IPR1 90 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 EEF1AKMT3Q96AZ1 226 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 OR5B12Q96R08 314 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 GNB4Q9HAV0 340 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 C21orf62Q9NYP8 219 aa13.48□□□□□ -0.25
PCCB-209ENST00000469217 F8W735 103 aaPredicted RBP13.47□□□□□ -0.25
PCCB-209ENST00000469217 SCAF4O95104 1147 aaKnown RBP13.47□□□□□ -0.25
PCCB-209ENST00000469217 CDX1P47902 265 aaPredicted RBP13.47□□□□□ -0.25
PCCB-209ENST00000469217 GAMTQ14353 236 aa13.47□□□□□ -0.25
PCCB-209ENST00000469217 ACSM6Q6P461 480 aa13.47□□□□□ -0.25
PCCB-209ENST00000469217 C18orf65Q6ZTR6 163 aa13.47□□□□□ -0.25
PCCB-209ENST00000469217 UBAC2Q8NBM4 344 aa13.47□□□□□ -0.25
PCCB-209ENST00000469217 ZNF502Q8TBZ5 544 aa13.47□□□□□ -0.25
PCCB-209ENST00000469217 CCDC140Q96MF4 163 aa13.47□□□□□ -0.25
PCCB-209ENST00000469217 ARPC5LQ9BPX5 153 aa13.47□□□□□ -0.25
PCCB-209ENST00000469217 DLK1P80370 383 aa13.46□□□□□ -0.25
PCCB-209ENST00000469217 ZNF343Q6P1L6 599 aa13.46□□□□□ -0.25
PCCB-209ENST00000469217 LILRB2Q8N423 598 aa13.46□□□□□ -0.25
PCCB-209ENST00000469217 ACY3Q96HD9 319 aa13.46□□□□□ -0.25
PCCB-209ENST00000469217 GGACTQ9BVM4 153 aa13.46□□□□□ -0.25
PCCB-209ENST00000469217 ZNF471Q9BX82 626 aaPredicted RBP13.46□□□□□ -0.25
PCCB-209ENST00000469217 SMIM3Q9BZL3 60 aa13.46□□□□□ -0.25
PCCB-209ENST00000469217 MED9Q9NWA0 146 aa13.46□□□□□ -0.25
PCCB-209ENST00000469217 TRBV7-1A0A0A6YYK4 115 aa13.46□□□□□ -0.26
PCCB-209ENST00000469217 RND2P52198 227 aa13.46□□□□□ -0.26
PCCB-209ENST00000469217 MFAP4P55083 255 aa13.46□□□□□ -0.26
PCCB-209ENST00000469217 CLINT1Q14677 625 aa13.46□□□□□ -0.26
PCCB-209ENST00000469217 TOR2AQ5JU69 321 aa13.46□□□□□ -0.26
PCCB-209ENST00000469217 CLEC19AQ6UXS0 136 aa13.46□□□□□ -0.26
PCCB-209ENST00000469217 TMEM116Q8NCL8 245 aa13.46□□□□□ -0.26
PCCB-209ENST00000469217 OR1S2Q8NGQ3 325 aa13.46□□□□□ -0.26
PCCB-209ENST00000469217 OR4X1Q8NH49 305 aa13.46□□□□□ -0.26
PCCB-209ENST00000469217 NPIPB3Q92617 1050 aa13.46□□□□□ -0.26
PCCB-209ENST00000469217 SLC35E1Q96K37 410 aa13.46□□□□□ -0.26
PCCB-209ENST00000469217 TSSC4Q9Y5U2 329 aaPredicted RBP13.46□□□□□ -0.26
PCCB-209ENST00000469217 TENM1Q9UKZ4 2725 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms