RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 PXMP4Q9Y6I8 212 aa-1.29□□□□□ -2.62
SSB-208ENST00000468600 PKD1L1Q8TDX9 2849 aa-1.29□□□□□ -2.62
SSB-208ENST00000468600 IGLV3-32A0A0A0MS00 114 aa-1.3□□□□□ -2.62
SSB-208ENST00000468600 IGHV1-58A0A0C4DH39 117 aa-1.3□□□□□ -2.62
SSB-208ENST00000468600 CAV1Q03135 178 aa-1.3□□□□□ -2.62
SSB-208ENST00000468600 FABP9Q0Z7S8 132 aa-1.3□□□□□ -2.62
SSB-208ENST00000468600 SLAMF1Q13291 335 aa-1.3□□□□□ -2.62
SSB-208ENST00000468600 GLT8D1Q68CQ7 371 aa-1.3□□□□□ -2.62
SSB-208ENST00000468600 SLC30A7Q8NEW0 376 aa-1.3□□□□□ -2.62
SSB-208ENST00000468600 EEF1AKMT1Q8WVE0 214 aa-1.3□□□□□ -2.62
SSB-208ENST00000468600 DERL1Q9BUN8 251 aa-1.3□□□□□ -2.62
SSB-208ENST00000468600 C1orf109Q9NX04 203 aa-1.3□□□□□ -2.62
SSB-208ENST00000468600 NUPR2A6NF83 97 aa-1.31□□□□□ -2.62
SSB-208ENST00000468600 ZNF879B4DU55 563 aa-1.31□□□□□ -2.62
SSB-208ENST00000468600 CFDP00746 253 aaPredicted RBP-1.31□□□□□ -2.62
SSB-208ENST00000468600 CD2P06729 351 aa-1.31□□□□□ -2.62
SSB-208ENST00000468600 MGST1P10620 155 aaKnown RBP-1.31□□□□□ -2.62
SSB-208ENST00000468600 LCN1P31025 176 aa-1.31□□□□□ -2.62
SSB-208ENST00000468600 IFITM2Q01629 132 aa-1.31□□□□□ -2.62
SSB-208ENST00000468600 ZNHIT3Q15649 155 aaPredicted RBP-1.31□□□□□ -2.62
SSB-208ENST00000468600 FBXO48Q5FWF7 155 aa-1.31□□□□□ -2.62
SSB-208ENST00000468600 SPANXN3Q5MJ09 141 aa-1.31□□□□□ -2.62
SSB-208ENST00000468600 AADACL3Q5VUY0 350 aa-1.31□□□□□ -2.62
SSB-208ENST00000468600 OR5A1Q8NGJ0 315 aa-1.31□□□□□ -2.62
SSB-208ENST00000468600 MCFD2Q8NI22 146 aa-1.31□□□□□ -2.62
SSB-208ENST00000468600 HDHD2Q9H0R4 259 aa-1.31□□□□□ -2.62
SSB-208ENST00000468600 CHD6Q8TD26 2715 aa-1.31□□□□□ -2.62
SSB-208ENST00000468600 CNOT1A5YKK6 2376 aaKnown RBP-1.32□□□□□ -2.62
SSB-208ENST00000468600 MYCBP2O75592 4640 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 INMT-MINDY4F8WBC2 141 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 SYT1P21579 422 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 KDELR2P33947 212 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 RBM3P98179 157 aaKnown RBP-1.32□□□□□ -2.62
SSB-208ENST00000468600 KHDC3LQ587J8 217 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 AADACL4Q5VUY2 407 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 HAGHLQ6PII5 290 aaPredicted RBP-1.32□□□□□ -2.62
SSB-208ENST00000468600 DNM1P34Q6PK57 102 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 PRR15Q8IV56 129 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 PSMF1Q92530 271 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 GINS4Q9BRT9 223 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 DERL2Q9GZP9 239 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 PROK2Q9HC23 129 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 FKBP14Q9NWM8 211 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 MYO18AQ92614 2054 aaKnown RBP-1.32□□□□□ -2.62
SSB-208ENST00000468600 USP9YO00507 2555 aaPredicted RBP-1.32□□□□□ -2.62
SSB-208ENST00000468600 MXRA5Q9NR99 2828 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 MYO7AQ13402 2215 aa-1.32□□□□□ -2.62
SSB-208ENST00000468600 PIK3R4Q99570 1358 aa-1.33□□□□□ -2.62
SSB-208ENST00000468600 SMIM9A6NGZ8 99 aa-1.33□□□□□ -2.62
SSB-208ENST00000468600 FTCDNL1E5RQL4 147 aa-1.33□□□□□ -2.62
SSB-208ENST00000468600 NDUFS8O00217 210 aa-1.33□□□□□ -2.62
SSB-208ENST00000468600 SPRR2BP35325 72 aa-1.33□□□□□ -2.62
SSB-208ENST00000468600 MIR17HGQ75NE6 70 aa-1.33□□□□□ -2.62
SSB-208ENST00000468600 KDM6BO15054 1643 aa-1.33□□□□□ -2.62
SSB-208ENST00000468600 CADP27708 2225 aa-1.34□□□□□ -2.62
SSB-208ENST00000468600 EPG5Q9HCE0 2579 aa-1.34□□□□□ -2.62
SSB-208ENST00000468600 TRBV30A0A0K0K1B3 111 aa-1.34□□□□□ -2.62
SSB-208ENST00000468600 ATP6V1G2O95670 118 aa-1.34□□□□□ -2.62
SSB-208ENST00000468600 TPM2P07951 284 aa-1.34□□□□□ -2.62
SSB-208ENST00000468600 CCL4P13236 92 aa-1.34□□□□□ -2.62
SSB-208ENST00000468600 PTMSP20962 102 aa-1.34□□□□□ -2.62
SSB-208ENST00000468600 CARD18P57730 90 aa-1.34□□□□□ -2.62
SSB-208ENST00000468600 GLIPR1L1Q6UWM5 242 aa-1.34□□□□□ -2.62
SSB-208ENST00000468600 HIST2H3AQ71DI3 136 aa-1.34□□□□□ -2.62
SSB-208ENST00000468600 LOC285556D6RIA3 1793 aa-1.34□□□□□ -2.62
SSB-208ENST00000468600 RYR1P21817 5038 aa-1.35□□□□□ -2.63
SSB-208ENST00000468600 TRBV20OR9-2A0A075B6H5 130 aa-1.35□□□□□ -2.63
SSB-208ENST00000468600 TIMM17BO60830 172 aa-1.35□□□□□ -2.63
SSB-208ENST00000468600 ORM1P02763 201 aa-1.35□□□□□ -2.63
SSB-208ENST00000468600 MAP3K7CLP57077 242 aa-1.35□□□□□ -2.63
SSB-208ENST00000468600 ZCCHC23Q6ZST2 131 aa-1.35□□□□□ -2.63
SSB-208ENST00000468600 IQCF2Q8IXL9 164 aa-1.35□□□□□ -2.63
SSB-208ENST00000468600 TERB2Q8NHR7 220 aa-1.35□□□□□ -2.63
SSB-208ENST00000468600 MED29Q9NX70 200 aa-1.35□□□□□ -2.63
SSB-208ENST00000468600 CHCHD2Q9Y6H1 151 aaPredicted RBP-1.35□□□□□ -2.63
SSB-208ENST00000468600 KIAA1109Q2LD37 5005 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 ALMS1Q8TCU4 4167 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 A0A0J9YY10 115 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 A0A1B0GX78 115 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 TOX3O15405 576 aaPredicted RBP-1.36□□□□□ -2.63
SSB-208ENST00000468600 HLA-DRAP01903 254 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 IL3P08700 152 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 CCDC172P0C7W6 258 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 HIST1H2BOP23527 126 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 HIST1H2BBP33778 126 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 SERPINB9P50453 376 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 CLDN12P56749 244 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 HIST1H2BDP58876 126 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 HIST1H2BCP62807 126 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 HIST2H2BEQ16778 126 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 HIST2H2BFQ5QNW6 126 aaPredicted RBP-1.36□□□□□ -2.63
SSB-208ENST00000468600 RPL22L1Q6P5R6 122 aaKnown RBP-1.36□□□□□ -2.63
SSB-208ENST00000468600 BPIFA4PQ86YQ2 179 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 HIST1H2BHQ93079 126 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 HIST1H2BNQ99877 126 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 HIST1H2BMQ99879 126 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 PSTPIP2Q9H939 334 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 PKDREJQ9NTG1 2253 aa-1.36□□□□□ -2.63
SSB-208ENST00000468600 MYO3BQ8WXR4 1341 aa-1.37□□□□□ -2.63
SSB-208ENST00000468600 SBF1O95248 1867 aa-1.37□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms