RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 ABCA12Q86UK0 2595 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 PTPN13Q12923 2485 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 KANTRA0A1W2PQU2 76 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 PRSS46E5RG02 174 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 TIMM23O14925 209 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 HRASP01112 189 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 PMCHP20382 165 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 HTR1DP28221 377 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 UBE2E1P51965 193 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 TMEM267Q0VDI3 215 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-208ENST00000468300 ALKAL2Q6UX46 152 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 SMIM3Q9BZL3 60 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 RFNGQ9Y644 331 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 TEX50A0A1B0GTY4 177 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 C15orf62A8K5M9 175 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 CST7O76096 145 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 VENTXO95231 258 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 USF1P22415 310 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-208ENST00000468300 IL3RAP26951 378 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 F2RL1P55085 397 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 PJVKQ0ZLH3 352 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 SIGLEC15Q6ZMC9 328 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 TMEM182Q6ZP80 229 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-208ENST00000468300 PSENENQ9NZ42 101 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 AMMECR1Q9Y4X0 333 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-208ENST00000468300 HILPDAQ9Y5L2 63 aa6.61□□□□□ -1.35
BRCA1-208ENST00000468300 PDE6DO43924 150 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 MT-CO2P00403 227 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 APOA2P02652 100 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 FAM157CP0CG43 387 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 SLC25A16P16260 332 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 RAB5CP51148 216 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 CAV2P51636 162 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 UBA52P62987 128 aaKnown RBP6.6□□□□□ -1.35
BRCA1-208ENST00000468300 Q8N6K4 173 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 TMEM167AQ8TBQ9 72 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 TCF19Q9Y242 345 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 TAAR5O14804 337 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 MSMBP08118 114 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 CD24P25063 80 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 DYNLT3P51808 116 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 ERVK-16P61578 105 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 MAPK1IP1LQ8NDC0 245 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 OR4A16Q8NH70 328 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 RPEQ96AT9 228 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 PINX1Q96BK5 328 aaKnown RBP6.6□□□□□ -1.35
BRCA1-208ENST00000468300 SFRP2Q96HF1 295 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 ZNF471Q9BX82 626 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-208ENST00000468300 ZNF257Q9Y2Q1 563 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 SOX21Q9Y651 276 aaPredicted RBP6.6□□□□□ -1.35
BRCA1-208ENST00000468300 MED13LQ71F56 2210 aa6.6□□□□□ -1.35
BRCA1-208ENST00000468300 TGIF2-C20orf24A0A0A6YYL0 155 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 ZNF785A8K8V0 405 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 WIPF1O43516 503 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 FGF2P09038 288 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 MDKP21741 143 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-208ENST00000468300 SULT1A1P50225 295 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 EBI3Q14213 229 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 PSG5Q15238 335 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 KLF17Q5JT82 389 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-208ENST00000468300 MINOS1Q5TGZ0 78 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 MOB3BQ86TA1 216 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 NDUFA4L2Q9NRX3 87 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 OR51B2Q9Y5P1 312 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 MINOS1-NBL1R4GNA1 71 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 TNCP24821 2201 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 ITPR2Q14571 2701 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 K7ERU9 68 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 RRHO14718 337 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 IFNA17P01571 189 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 OR10J4P0C629 311 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 C4BPBP20851 252 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 SAA4P35542 130 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 ELLP55199 621 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-208ENST00000468300 HSPE1P61604 102 aaKnown RBP6.59□□□□□ -1.35
BRCA1-208ENST00000468300 BAXQ07812 192 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 LOXL1Q08397 574 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-208ENST00000468300 RBPMS2Q6ZRY4 209 aaKnown RBP6.59□□□□□ -1.35
BRCA1-208ENST00000468300 BAP18Q8IXM2 172 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 OR5C1Q8NGR4 320 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 OR4A5Q8NH83 315 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 PHYHIPLQ96FC7 376 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 GINS3Q9BRX5 216 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 UFC1Q9Y3C8 167 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 SMCO3A2RU48 225 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 GGCTO75223 188 aaKnown RBP6.59□□□□□ -1.35
BRCA1-208ENST00000468300 NMBP08949 121 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 SELENOTP62341 195 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 PRCDQ00LT1 54 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 SPANXN5Q5MJ07 72 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 C10orf55Q5SWW7 151 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 FAM120AOSQ5T036 256 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 RUSC1-AS1Q66K80 236 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 TMEM217Q8N7C4 229 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 NPBQ8NG41 125 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 SH3BGRL3Q9H299 93 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 TMEM231Q9H6L2 316 aa6.59□□□□□ -1.35
BRCA1-208ENST00000468300 A8MWP6 167 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 FCN1O00602 326 aa6.58□□□□□ -1.36
BRCA1-208ENST00000468300 PHOX2AO14813 284 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms