RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 INAFM1C9JVW0 142 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 CLDN34H7C241 214 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 MPDU1O75352 247 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 BRI3O95415 125 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 NMBP08949 121 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 DEFA4P12838 97 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 SRD5A1P18405 259 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 DEFA5Q01523 94 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 AKR1C1Q04828 323 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 TMEM95Q3KNT9 176 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 ETFRF1Q6IPR1 90 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 EIF5AL1Q6IS14 154 aaKnown RBP10.16□□□□□ -0.78
COL4A1-202ENST00000467182 ACSM6Q6P461 480 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 TEPPQ6URK8 271 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 TMEM182Q6ZP80 229 aaPredicted RBP10.16□□□□□ -0.78
COL4A1-202ENST00000467182 Q8N2B8 174 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 TMEM116Q8NCL8 245 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 NPIPB3Q92617 1050 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 SLC35E1Q96K37 410 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 GGTLC1Q9BX51 225 aa10.16□□□□□ -0.78
COL4A1-202ENST00000467182 SONP18583 2426 aaKnown RBP10.16□□□□□ -0.78
COL4A1-202ENST00000467182 FLNBO75369 2602 aaKnown RBP10.16□□□□□ -0.78
COL4A1-202ENST00000467182 F8W735 103 aaPredicted RBP10.15□□□□□ -0.78
COL4A1-202ENST00000467182 AP4M1O00189 453 aa10.15□□□□□ -0.78
COL4A1-202ENST00000467182 AGPAT2O15120 278 aa10.15□□□□□ -0.78
COL4A1-202ENST00000467182 OR2J3O76001 311 aa10.15□□□□□ -0.78
COL4A1-202ENST00000467182 HIST1H1BP16401 226 aaKnown RBP10.15□□□□□ -0.78
COL4A1-202ENST00000467182 RND2P52198 227 aa10.15□□□□□ -0.78
COL4A1-202ENST00000467182 CLLU1Q5K131 121 aa10.15□□□□□ -0.78
COL4A1-202ENST00000467182 OR4X1Q8NH49 305 aa10.15□□□□□ -0.78
COL4A1-202ENST00000467182 ACY3Q96HD9 319 aa10.15□□□□□ -0.78
COL4A1-202ENST00000467182 NPFFR1Q9GZQ6 430 aa10.15□□□□□ -0.78
COL4A1-202ENST00000467182 VSIRQ9H7M9 311 aa10.15□□□□□ -0.78
COL4A1-202ENST00000467182 SLC45A2Q9UMX9 530 aa10.15□□□□□ -0.78
COL4A1-202ENST00000467182 HIVEP1P15822 2718 aa10.15□□□□□ -0.78
COL4A1-202ENST00000467182 MFSD2BA6NFX1 497 aa10.14□□□□□ -0.79
COL4A1-202ENST00000467182 IGLV1-40P01703 118 aa10.14□□□□□ -0.79
COL4A1-202ENST00000467182 LINC00869P0C866 280 aa10.14□□□□□ -0.79
COL4A1-202ENST00000467182 CAMLGP49069 296 aa10.14□□□□□ -0.79
COL4A1-202ENST00000467182 SERF2P84101 59 aa10.14□□□□□ -0.79
COL4A1-202ENST00000467182 PRR20EP86478 221 aa10.14□□□□□ -0.79
COL4A1-202ENST00000467182 PRR20CP86479 221 aa10.14□□□□□ -0.79
COL4A1-202ENST00000467182 PRR20DP86480 221 aa10.14□□□□□ -0.79
COL4A1-202ENST00000467182 PRR20BP86481 221 aa10.14□□□□□ -0.79
COL4A1-202ENST00000467182 PRR20AP86496 221 aa10.14□□□□□ -0.79
COL4A1-202ENST00000467182 SCGB2A2Q13296 93 aa10.14□□□□□ -0.79
COL4A1-202ENST00000467182 RBMS3Q6XE24 437 aaKnown RBP10.14□□□□□ -0.79
COL4A1-202ENST00000467182 RNF141Q8WVD5 230 aa10.14□□□□□ -0.79
COL4A1-202ENST00000467182 PRSS22Q9GZN4 317 aa10.14□□□□□ -0.79
COL4A1-202ENST00000467182 C17orf112F2Z3M2 114 aa10.13□□□□□ -0.79
COL4A1-202ENST00000467182 H3BUA1 57 aa10.13□□□□□ -0.79
COL4A1-202ENST00000467182 TRIM77I1YAP6 450 aa10.13□□□□□ -0.79
COL4A1-202ENST00000467182 TSPAN9O75954 239 aa10.13□□□□□ -0.79
COL4A1-202ENST00000467182 YIF1AO95070 293 aa10.13□□□□□ -0.79
COL4A1-202ENST00000467182 RNASE1P07998 156 aaKnown RBP10.13□□□□□ -0.79
COL4A1-202ENST00000467182 OR10J1P30954 320 aa10.13□□□□□ -0.79
COL4A1-202ENST00000467182 RPL29P47914 159 aaKnown RBP10.13□□□□□ -0.79
COL4A1-202ENST00000467182 FHITP49789 147 aa10.13□□□□□ -0.79
COL4A1-202ENST00000467182 HILS1P60008 231 aa10.13□□□□□ -0.79
COL4A1-202ENST00000467182 MIC13Q5XKP0 118 aa10.13□□□□□ -0.79
COL4A1-202ENST00000467182 ZNF414Q96IQ9 312 aa10.13□□□□□ -0.79
COL4A1-202ENST00000467182 FBXL7Q9UJT9 491 aa10.13□□□□□ -0.79
COL4A1-202ENST00000467182 S4R3C0 116 aa10.13□□□□□ -0.79
COL4A1-202ENST00000467182 TCRBV4S1A1TA0A5B7 111 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 UMAD1C9J7I0 102 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 CYB5BO43169 146 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 CLN5O75503 358 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 IGLC1P0CG04 106 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 FCGR2BP31994 310 aaPredicted RBP10.12□□□□□ -0.79
COL4A1-202ENST00000467182 RAB5CP51148 216 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 ELLP55199 621 aaPredicted RBP10.12□□□□□ -0.79
COL4A1-202ENST00000467182 RAB2AP61019 212 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 RHOGP84095 191 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 ZNF90Q03938 601 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 ZNF726P1Q15940 193 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 CYP2G1PQ6ZSU1 146 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 Q6ZSV7 163 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 STPG3Q8N7X2 389 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 NECAP1Q8NC96 275 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 LRRC20Q8TCA0 184 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 VN1R17PQ8TDU5 208 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 SAT2Q96F10 170 aaPredicted RBP10.12□□□□□ -0.79
COL4A1-202ENST00000467182 CXorf58Q96LI9 332 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 MS4A10Q96PG2 267 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 TRGV9Q99603 122 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 RPRMQ9NS64 109 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 SERTAD4Q9NUC0 356 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 THYN1Q9P016 225 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 PXMP4Q9Y6I8 212 aa10.12□□□□□ -0.79
COL4A1-202ENST00000467182 FAM181BA6NEQ2 426 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 IGKV1-17P01599 117 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 IGHG4P01861 327 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 GATA2P23769 480 aaPredicted RBP10.11□□□□□ -0.79
COL4A1-202ENST00000467182 C15orf32Q32M92 178 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 TMEM41BQ5BJD5 291 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 GCSAMLQ5JQS6 135 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 FFAR4Q5NUL3 377 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 C10orf99Q6UWK7 81 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 Q6ZRG5 221 aa10.11□□□□□ -0.79
COL4A1-202ENST00000467182 SSX7Q7RTT5 188 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms