RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 NEUROG3Q9Y4Z2 214 aa2.48□□□□□ -2.01
CCDC58-203ENST00000466854 ATG2BQ96BY7 2078 aa2.48□□□□□ -2.01
CCDC58-203ENST00000466854 CITO14578 2027 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 NUP205Q92621 2012 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 PTPRBP23467 1997 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 EML5Q05BV3 1969 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 ZFHX3Q15911 3703 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 SPG11Q96JI7 2443 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 DENND4CQ5VZ89 1909 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 IGHV1OR15-1A0A075B7D0 117 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 IGHV3OR16-13A0A075B7E8 117 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 TRAV38-1A0A0B4J264 116 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 A0A0X1KG70 313 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 C5orf49A4QMS7 147 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 LINC00862A6NCI5 91 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 A8MWP6 167 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 LEUTXA8MZ59 168 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 TMEM250H0YL14 139 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 H3BP45 60 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 M0R143 59 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 SS18L1O75177 396 aaPredicted RBP2.47□□□□□ -2.01
CCDC58-203ENST00000466854 KCNK2O95069 426 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 FSTL3O95633 263 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 OR2H2O95918 312 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 GYPCP04921 128 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 TDGF1P13385 188 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 RPS4Y1P22090 263 aaKnown RBP2.47□□□□□ -2.01
CCDC58-203ENST00000466854 ERCC8Q13216 396 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 HERPUD1Q15011 391 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 SSX1Q16384 188 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 BATFQ16520 125 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 LINC00303Q3SY05 128 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 C6orf99Q4VX62 202 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 CENPWQ5EE01 88 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 PABPC1L2AQ5JQF8 200 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 C1orf100Q5SVJ3 147 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 LDLRAD2Q5SZI1 272 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 GLYATQ6IB77 296 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 FBXW12Q6X9E4 464 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 ZNF571Q7Z3V5 609 aaPredicted RBP2.47□□□□□ -2.01
CCDC58-203ENST00000466854 PRNTQ86SH4 94 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 NKAPP1Q8N9T2 125 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 TMEM229BQ8NBD8 167 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 NUP35Q8NFH5 326 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 OR51T1Q8NGJ9 327 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 FAM3DQ96BQ1 224 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 CMBLQ96DG6 245 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 NEURL3Q96EH8 262 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 VSIG2Q96IQ7 327 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 SMIM8Q96KF7 97 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 CNBD2Q96M20 576 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 OR2M4Q96R27 311 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 PBDC1Q9BVG4 233 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 TMEM133Q9H2Q1 129 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 SRMSQ9H3Y6 488 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 NOX3Q9HBY0 568 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 SLCO1B3Q9NPD5 702 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 DNAJC12Q9UKB3 198 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 TRAPPC2LQ9UL33 140 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 ANAPC10Q9UM13 185 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 KLF13Q9Y2Y9 288 aaPredicted RBP2.47□□□□□ -2.01
CCDC58-203ENST00000466854 COQ4Q9Y3A0 265 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 PDCD11Q14690 1871 aaKnown RBP2.47□□□□□ -2.01
CCDC58-203ENST00000466854 TRIP11Q15643 1979 aa2.47□□□□□ -2.01
CCDC58-203ENST00000466854 ASXL3Q9C0F0 2248 aa2.46□□□□□ -2.01
CCDC58-203ENST00000466854 PLXNB3Q9ULL4 1909 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 PCNX1Q96RV3 2341 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 PTPRQQ9UMZ3 2332 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 TRAV30A0A087WSZ9 112 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 SMIM26A0A096LP01 95 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 TRAV8-3A0A0A6YYJ7 113 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 IGHV6-1A0A0B4J1U7 121 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 IGHV2-26A0A0B4J1V2 119 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 LOC107984640A0A0U1RRK4 108 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 KNCNA6PVL3 124 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 J3QKU1 62 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 J3QQQ9 107 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 RBFOX2O43251 390 aaKnown RBP eCLIP2.46□□□□□ -2.02
CCDC58-203ENST00000466854 OR7C2O60412 319 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 NDUFC2O95298 119 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 CXorf1O96002 111 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 HLA-DRB1P01911 266 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 HLA-DQB2P05538 268 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 H2AFZP0C0S5 128 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 OR4Q2P0C623 313 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 CECR9P0C854 216 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 P0C879 139 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 P0DMU3 169 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 FAM231AP0DMU4 169 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 FAM231CP0DMU5 169 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 LPAR6P43657 344 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 VDAC2P45880 294 aaPredicted RBP2.46□□□□□ -2.02
CCDC58-203ENST00000466854 ZNF140P52738 457 aaPredicted RBP2.46□□□□□ -2.02
CCDC58-203ENST00000466854 SLC18A1P54219 525 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 GFERP55789 205 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 DEFB103AP81534 67 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 MRPS10P82664 201 aaKnown RBP2.46□□□□□ -2.02
CCDC58-203ENST00000466854 RHOGP84095 191 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 CDK6Q00534 326 aa2.46□□□□□ -2.02
CCDC58-203ENST00000466854 DHRS2Q13268 280 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms