RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 MLXQ9UH92 298 aa10.81□□□□□ -0.68
UBE4B-206ENST00000466379 YTHDF2Q9Y5A9 579 aaKnown RBP10.81□□□□□ -0.68
UBE4B-206ENST00000466379 TMEM250H0YL14 139 aa10.8□□□□□ -0.68
UBE4B-206ENST00000466379 CNIH1O95406 144 aa10.8□□□□□ -0.68
UBE4B-206ENST00000466379 MOSP00540 346 aa10.8□□□□□ -0.68
UBE4B-206ENST00000466379 TMEM37Q8WXS4 190 aa10.8□□□□□ -0.68
UBE4B-206ENST00000466379 RNF5Q99942 180 aa10.8□□□□□ -0.68
UBE4B-206ENST00000466379 FUT9Q9Y231 359 aa10.8□□□□□ -0.68
UBE4B-206ENST00000466379 DMRT1Q9Y5R6 373 aa10.8□□□□□ -0.68
UBE4B-206ENST00000466379 URGCP-MRPS24S4R325 110 aa10.8□□□□□ -0.68
UBE4B-206ENST00000466379 DOPEY1Q5JWR5 2465 aa10.79□□□□□ -0.68
UBE4B-206ENST00000466379 UTP20O75691 2785 aaKnown RBP10.79□□□□□ -0.68
UBE4B-206ENST00000466379 PDLIM4P50479 330 aa10.79□□□□□ -0.68
UBE4B-206ENST00000466379 HABP2Q14520 560 aaPredicted RBP10.79□□□□□ -0.68
UBE4B-206ENST00000466379 ADIRFQ15847 76 aa10.79□□□□□ -0.68
UBE4B-206ENST00000466379 MORN5Q5VZ52 161 aa10.79□□□□□ -0.68
UBE4B-206ENST00000466379 ODF1Q14990 250 aa10.79□□□□□ -0.68
UBE4B-206ENST00000466379 MRPL41Q8IXM3 137 aaKnown RBP10.79□□□□□ -0.68
UBE4B-206ENST00000466379 ZNF114Q8NC26 417 aa10.79□□□□□ -0.68
UBE4B-206ENST00000466379 C2CD4CQ8TF44 421 aa10.79□□□□□ -0.68
UBE4B-206ENST00000466379 YPEL4Q96NS1 127 aa10.79□□□□□ -0.68
UBE4B-206ENST00000466379 DERL1Q9BUN8 251 aa10.79□□□□□ -0.68
UBE4B-206ENST00000466379 GSX1Q9H4S2 264 aaPredicted RBP10.79□□□□□ -0.68
UBE4B-206ENST00000466379 NAT8Q9UHE5 227 aa10.79□□□□□ -0.68
UBE4B-206ENST00000466379 A0A087WWC5 75 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 TRAV5A0A0B4J249 113 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 TCRBV4S1A1TA0A5B7 111 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 MT-ND4LP03901 98 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 CTAG1AP78358 180 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 PNRC1Q12796 327 aaPredicted RBP10.78□□□□□ -0.68
UBE4B-206ENST00000466379 TMEM241Q24JQ0 296 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 PVRIGQ6DKI7 326 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 OR1P1Q8NH06 330 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 NRGNQ92686 78 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 ZNF503Q96F45 646 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 SSX3Q99909 188 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 F11RQ9Y624 299 aaKnown RBP10.78□□□□□ -0.68
UBE4B-206ENST00000466379 PSMB11A5LHX3 300 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 NDUFB4O95168 129 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 MT-CO2P00403 227 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 OR5G3P0C626 314 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 OR10J4P0C629 311 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 RPL23P62829 140 aaKnown RBP10.78□□□□□ -0.68
UBE4B-206ENST00000466379 RNF212Q495C1 297 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 THAP8Q8NA92 274 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 OR5T1Q8NG75 326 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 OR2T10Q8NGZ9 312 aa10.78□□□□□ -0.68
UBE4B-206ENST00000466379 IGHV4-61A0A0C4DH41 118 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 SCO2A0A1W2PP80 73 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 NCBP2LA6PVI3 153 aaKnown RBP10.77□□□□□ -0.69
UBE4B-206ENST00000466379 SMAD7O15105 426 aaKnown RBP10.77□□□□□ -0.69
UBE4B-206ENST00000466379 OR7C2O60412 319 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 NDUFA3O95167 84 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 CRYGCP07315 174 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 RAB5AP20339 215 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 FAM120AOSQ5T036 256 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 LINC00469Q8N7U9 141 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 NPBQ8NG41 125 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 NANPQ8TBE9 248 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 FAM168AQ92567 244 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 UHRF2Q96PU4 802 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 AURKAIP1Q9NWT8 199 aaPredicted RBP10.77□□□□□ -0.69
UBE4B-206ENST00000466379 PDE6DO43924 150 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 CXCL1P09341 107 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 FXYD3Q14802 87 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 C5orf64Q2M2E5 130 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 MINOS1Q5TGZ0 78 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 ZNF843Q8N446 348 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 OR4X1Q8NH49 305 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 Q8WTZ3 238 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 WNT10AQ9GZT5 417 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 TNFRSF19Q9NS68 423 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 TECRQ9NZ01 308 aaKnown RBP10.77□□□□□ -0.69
UBE4B-206ENST00000466379 MINOS1-NBL1R4GNA1 71 aa10.77□□□□□ -0.69
UBE4B-206ENST00000466379 ABCA2Q9BZC7 2435 aa10.76□□□□□ -0.69
UBE4B-206ENST00000466379 TGIF2-C20orf24A0A0A6YYL0 155 aa10.76□□□□□ -0.69
UBE4B-206ENST00000466379 PGPEP1LA6NFU8 196 aa10.76□□□□□ -0.69
UBE4B-206ENST00000466379 B4DEV8 164 aa10.76□□□□□ -0.69
UBE4B-206ENST00000466379 FLI1Q01543 452 aaPredicted RBP10.76□□□□□ -0.69
UBE4B-206ENST00000466379 ELOBQ15370 118 aa10.76□□□□□ -0.69
UBE4B-206ENST00000466379 ETFRF1Q6IPR1 90 aa10.76□□□□□ -0.69
UBE4B-206ENST00000466379 CCDC144NLQ6NUI1 221 aa10.76□□□□□ -0.69
UBE4B-206ENST00000466379 PATE2Q6UY27 113 aa10.76□□□□□ -0.69
UBE4B-206ENST00000466379 AJUBAQ96IF1 538 aa10.76□□□□□ -0.69
UBE4B-206ENST00000466379 ZNF462Q96JM2 2506 aa10.76□□□□□ -0.69
UBE4B-206ENST00000466379 MYO18BQ8IUG5 2567 aa10.76□□□□□ -0.69
UBE4B-206ENST00000466379 IGHV3OR16-10A0A075B7F0 116 aa10.75□□□□□ -0.69
UBE4B-206ENST00000466379 COX7A2P2O60397 106 aa10.75□□□□□ -0.69
UBE4B-206ENST00000466379 SAA4P35542 130 aa10.75□□□□□ -0.69
UBE4B-206ENST00000466379 UBE2E1P51965 193 aa10.75□□□□□ -0.69
UBE4B-206ENST00000466379 ATP5J2P56134 94 aa10.75□□□□□ -0.69
UBE4B-206ENST00000466379 KLF17Q5JT82 389 aaPredicted RBP10.75□□□□□ -0.69
UBE4B-206ENST00000466379 PIMREGQ9BSJ6 248 aa10.75□□□□□ -0.69
UBE4B-206ENST00000466379 SLC25A2Q9BXI2 301 aa10.75□□□□□ -0.69
UBE4B-206ENST00000466379 DNAJC4Q9NNZ3 241 aa10.75□□□□□ -0.69
UBE4B-206ENST00000466379 FOLR2P14207 255 aa10.75□□□□□ -0.69
UBE4B-206ENST00000466379 TMEM11P17152 192 aa10.75□□□□□ -0.69
UBE4B-206ENST00000466379 NDPQ00604 133 aa10.75□□□□□ -0.69
UBE4B-206ENST00000466379 PERPQ96FX8 193 aa10.75□□□□□ -0.69
UBE4B-206ENST00000466379 A1L4Q6 167 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms