RNA–Protein interactions for RNA: ENST00000465484.1

AFF4-206, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 1 (best)

Gene AFF4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-206ENST00000465484 ABCA12Q86UK0 2595 aa13.67□□□□□ -0.22
AFF4-206ENST00000465484 CSMD2Q7Z408 3487 aa13.67□□□□□ -0.22
AFF4-206ENST00000465484 IGKV1D-37A0A075B6S9 117 aa13.67□□□□□ -0.22
AFF4-206ENST00000465484 IGHV3-21A0A0B4J1V1 117 aa13.67□□□□□ -0.22
AFF4-206ENST00000465484 TRAV20A0A0B4J274 112 aa13.67□□□□□ -0.22
AFF4-206ENST00000465484 CORTO00230 105 aa13.67□□□□□ -0.22
AFF4-206ENST00000465484 IFNA1P01562 189 aa13.67□□□□□ -0.22
AFF4-206ENST00000465484 BTN1A1Q13410 526 aa13.67□□□□□ -0.22
AFF4-206ENST00000465484 SPATA31B1PQ5VZV4 182 aa13.67□□□□□ -0.22
AFF4-206ENST00000465484 ARPC1AQ92747 370 aa13.67□□□□□ -0.22
AFF4-206ENST00000465484 C1RLQ9NZP8 487 aa13.67□□□□□ -0.22
AFF4-206ENST00000465484 A0A0U1RQK1 487 aa13.66□□□□□ -0.22
AFF4-206ENST00000465484 MT-CO2P00403 227 aa13.66□□□□□ -0.22
AFF4-206ENST00000465484 NPBWR1P48145 328 aa13.66□□□□□ -0.22
AFF4-206ENST00000465484 ASPHD1Q5U4P2 390 aa13.66□□□□□ -0.22
AFF4-206ENST00000465484 SLC35E3Q7Z769 313 aa13.66□□□□□ -0.22
AFF4-206ENST00000465484 IQCF2Q8IXL9 164 aa13.66□□□□□ -0.22
AFF4-206ENST00000465484 LINC01356Q8N9X3 169 aa13.66□□□□□ -0.22
AFF4-206ENST00000465484 GATAD1Q8WUU5 269 aa13.66□□□□□ -0.22
AFF4-206ENST00000465484 VAX2Q9UIW0 290 aa13.66□□□□□ -0.22
AFF4-206ENST00000465484 SVEP1Q4LDE5 3571 aa13.65□□□□□ -0.22
AFF4-206ENST00000465484 DOPEY2Q9Y3R5 2298 aa13.65□□□□□ -0.22
AFF4-206ENST00000465484 SNAPINO95295 136 aa13.65□□□□□ -0.22
AFF4-206ENST00000465484 AVPP01185 164 aa13.65□□□□□ -0.22
AFF4-206ENST00000465484 RHOBP62745 196 aa13.65□□□□□ -0.22
AFF4-206ENST00000465484 TMEM249Q2WGJ8 235 aa13.65□□□□□ -0.22
AFF4-206ENST00000465484 SOHLH1Q5JUK2 328 aa13.65□□□□□ -0.22
AFF4-206ENST00000465484 HIST2H2BCQ6DN03 193 aa13.65□□□□□ -0.22
AFF4-206ENST00000465484 RBMS3Q6XE24 437 aaKnown RBP13.65□□□□□ -0.22
AFF4-206ENST00000465484 LRRC75A-AS1Q8N1F1 130 aa13.65□□□□□ -0.22
AFF4-206ENST00000465484 CYB561D1Q8N8Q1 229 aa13.65□□□□□ -0.22
AFF4-206ENST00000465484 SEPSECSQ9HD40 501 aaKnown RBP13.65□□□□□ -0.22
AFF4-206ENST00000465484 SOX21Q9Y651 276 aaPredicted RBP13.65□□□□□ -0.22
AFF4-206ENST00000465484 IGHV7-81A0A0B4J1V7 117 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 TCRBV4S1A1TA0A5B7 111 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 I3L2K1 104 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 STAG3L2P0CL84 134 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 STAG3L3P0CL85 134 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 CEBPGP53567 150 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 ZNF90Q03938 601 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 KLF17Q5JT82 389 aaPredicted RBP13.64□□□□□ -0.23
AFF4-206ENST00000465484 MAPK1IP1LQ8NDC0 245 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.64□□□□□ -0.236e-8■■■□□ 19.2
AFF4-206ENST00000465484 RNF223E7ERA6 249 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 HLA-DRB1P01911 266 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 ARL14EPLP0DKL9 152 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 EGR2P11161 476 aaPredicted RBP13.64□□□□□ -0.23
AFF4-206ENST00000465484 GATA3P23771 443 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 LOXL1Q08397 574 aaPredicted RBP13.64□□□□□ -0.23
AFF4-206ENST00000465484 TMEM116Q8NCL8 245 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 CLRN3Q8NCR9 226 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 PIFOQ8TCI5 191 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 PSMG3-AS1Q96PY0 264 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 RASL11BQ9BPW5 248 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 MEGF9Q9H1U4 602 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 MANBALQ9NQG1 85 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 ABCA1O95477 2261 aa13.64□□□□□ -0.23
AFF4-206ENST00000465484 PSMB3P49720 205 aa13.63□□□□□ -0.23
AFF4-206ENST00000465484 Q5PR19 223 aa13.63□□□□□ -0.23
AFF4-206ENST00000465484 FAM78BQ5VT40 261 aa13.63□□□□□ -0.23
AFF4-206ENST00000465484 MIR17HGQ75NE6 70 aa13.63□□□□□ -0.23
AFF4-206ENST00000465484 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.63□□□□□ -0.23
AFF4-206ENST00000465484 C22orf15Q8WYQ4 148 aa13.63□□□□□ -0.23
AFF4-206ENST00000465484 HSPB9Q9BQS6 159 aa13.63□□□□□ -0.23
AFF4-206ENST00000465484 TNFRSF19Q9NS68 423 aa13.63□□□□□ -0.23
AFF4-206ENST00000465484 FUT9Q9Y231 359 aa13.63□□□□□ -0.23
AFF4-206ENST00000465484 NAV2Q8IVL1 2488 aa13.63□□□□□ -0.23
AFF4-206ENST00000465484 PSMB11A5LHX3 300 aa13.62□□□□□ -0.23
AFF4-206ENST00000465484 NPIPB5A8MRT5 1133 aa13.62□□□□□ -0.23
AFF4-206ENST00000465484 DNASE2O00115 360 aaPredicted RBP13.62□□□□□ -0.23
AFF4-206ENST00000465484 CXorf1O96002 111 aa13.62□□□□□ -0.23
AFF4-206ENST00000465484 CD81P60033 236 aa13.62□□□□□ -0.23
AFF4-206ENST00000465484 SPNS3Q6ZMD2 512 aa13.62□□□□□ -0.23
AFF4-206ENST00000465484 OR1L6Q8NGR2 347 aa13.62□□□□□ -0.23
AFF4-206ENST00000465484 APCP25054 2843 aa13.62□□□□□ -0.23
AFF4-206ENST00000465484 FAM74A7A6NL05 159 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 K7EIM0 57 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 PAGE4O60829 102 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 OR5G3P0C626 314 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 SELENOTP62341 195 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 MEF2BQ02080 365 aaPredicted RBP13.61□□□□□ -0.23
AFF4-206ENST00000465484 FAM74A3Q4VXF1 159 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 TMEM219Q86XT9 240 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 TTC9CQ8N5M4 171 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 TMEM37Q8WXS4 190 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 TRGV9Q99603 122 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 CELSR1Q9NYQ6 3014 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 NUPL2O15504 423 aaKnown RBP13.61□□□□□ -0.23
AFF4-206ENST00000465484 TAGLN2P37802 199 aaKnown RBP13.61□□□□□ -0.23
AFF4-206ENST00000465484 FAM90A2PQ658T7 463 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 FANCD2OSQ96PS1 177 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 C19orf24Q9BVV8 132 aa13.61□□□□□ -0.23
AFF4-206ENST00000465484 GSX1Q9H4S2 264 aaPredicted RBP13.61□□□□□ -0.23
AFF4-206ENST00000465484 TSPAN9O75954 239 aa13.6□□□□□ -0.23
AFF4-206ENST00000465484 GCHFRP30047 84 aa13.6□□□□□ -0.23
AFF4-206ENST00000465484 C5orf56Q8N8D9 126 aa13.6□□□□□ -0.23
AFF4-206ENST00000465484 MBD6Q96DN6 1003 aa13.6□□□□□ -0.23
AFF4-206ENST00000465484 RBM14Q96PK6 669 aaKnown RBP13.6□□□□□ -0.23
AFF4-206ENST00000465484 SSX3Q99909 188 aa13.6□□□□□ -0.23
AFF4-206ENST00000465484 DOK5Q9P104 306 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms