RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 SEPSECSQ9HD40 501 aaKnown RBP6.44□□□□□ -1.38
APP-213ENST00000464867 MRPS16Q9Y3D3 137 aaKnown RBP6.44□□□□□ -1.38
APP-213ENST00000464867 CBY3A6NI87 242 aa6.43□□□□□ -1.38
APP-213ENST00000464867 M0QYG6 137 aa6.43□□□□□ -1.38
APP-213ENST00000464867 MT-CO2P00403 227 aa6.43□□□□□ -1.38
APP-213ENST00000464867 HPRT1P00492 218 aa6.43□□□□□ -1.38
APP-213ENST00000464867 HLA-DQB1P01920 261 aa6.43□□□□□ -1.38
APP-213ENST00000464867 CTXN2P0C2S0 81 aa6.43□□□□□ -1.38
APP-213ENST00000464867 ASIPP42127 132 aa6.43□□□□□ -1.38
APP-213ENST00000464867 P2RY14Q15391 338 aa6.43□□□□□ -1.38
APP-213ENST00000464867 SPAG16Q8N0X2 631 aa6.43□□□□□ -1.38
APP-213ENST00000464867 CADM3Q8N126 398 aa6.43□□□□□ -1.38
APP-213ENST00000464867 ZFP41Q8N8Y5 198 aa6.43□□□□□ -1.38
APP-213ENST00000464867 MAFIPQ8WZ33 124 aa6.43□□□□□ -1.38
APP-213ENST00000464867 PGLYRP3Q96LB9 341 aa6.43□□□□□ -1.38
APP-213ENST00000464867 DCSTAMPQ9H295 470 aa6.43□□□□□ -1.38
APP-213ENST00000464867 FGF20Q9NP95 211 aaPredicted RBP6.43□□□□□ -1.38
APP-213ENST00000464867 TMEM140Q9NV12 185 aa6.43□□□□□ -1.38
APP-213ENST00000464867 MRPS18AQ9NVS2 196 aaKnown RBP6.43□□□□□ -1.38
APP-213ENST00000464867 LRP1Q07954 4544 aaKnown RBP6.43□□□□□ -1.38
APP-213ENST00000464867 PNMA8CA0A1B0GUJ8 204 aa6.42□□□□□ -1.38
APP-213ENST00000464867 FOXI3A8MTJ6 420 aaPredicted RBP6.42□□□□□ -1.38
APP-213ENST00000464867 I3L2K1 104 aa6.42□□□□□ -1.38
APP-213ENST00000464867 SCGB2A1O75556 95 aa6.42□□□□□ -1.38
APP-213ENST00000464867 IGHV3-48P01763 117 aa6.42□□□□□ -1.38
APP-213ENST00000464867 CALB2P22676 271 aa6.42□□□□□ -1.38
APP-213ENST00000464867 CRYBB3P26998 211 aa6.42□□□□□ -1.38
APP-213ENST00000464867 BRWD1-AS2P59051 145 aa6.42□□□□□ -1.38
APP-213ENST00000464867 ERVK-16P61578 105 aa6.42□□□□□ -1.38
APP-213ENST00000464867 OR5I1Q13606 314 aa6.42□□□□□ -1.38
APP-213ENST00000464867 ESRGQ1W209 222 aa6.42□□□□□ -1.38
APP-213ENST00000464867 ACSM3Q53FZ2 586 aa6.42□□□□□ -1.38
APP-213ENST00000464867 PLAC9Q5JTB6 97 aa6.42□□□□□ -1.38
APP-213ENST00000464867 AMIGO2Q86SJ2 522 aa6.42□□□□□ -1.38
APP-213ENST00000464867 TPRA1Q86W33 373 aa6.42□□□□□ -1.38
APP-213ENST00000464867 LYSMD2Q8IV50 215 aa6.42□□□□□ -1.38
APP-213ENST00000464867 OR4B1Q8NGF8 309 aa6.42□□□□□ -1.38
APP-213ENST00000464867 FCGR1BQ92637 280 aa6.42□□□□□ -1.38
APP-213ENST00000464867 PINX1Q96BK5 328 aaKnown RBP6.42□□□□□ -1.38
APP-213ENST00000464867 RAB3CQ96E17 227 aa6.42□□□□□ -1.38
APP-213ENST00000464867 NDUFA4L2Q9NRX3 87 aa6.42□□□□□ -1.38
APP-213ENST00000464867 ARL2BPQ9Y2Y0 163 aa6.42□□□□□ -1.38
APP-213ENST00000464867 IRGMA1A4Y4 181 aa6.41□□□□□ -1.38
APP-213ENST00000464867 FAM90A26D6RGX4 464 aa6.41□□□□□ -1.38
APP-213ENST00000464867 SIVA1O15304 175 aa6.41□□□□□ -1.38
APP-213ENST00000464867 RBFOX2O43251 390 aaKnown RBP eCLIP6.41□□□□□ -1.38
APP-213ENST00000464867 SNAPC5O75971 98 aa6.41□□□□□ -1.38
APP-213ENST00000464867 LALBAP00709 142 aa6.41□□□□□ -1.38
APP-213ENST00000464867 IGLV2-14P01704 120 aa6.41□□□□□ -1.38
APP-213ENST00000464867 FCGR1AP12314 374 aa6.41□□□□□ -1.38
APP-213ENST00000464867 NFYAP23511 347 aaPredicted RBP6.41□□□□□ -1.38
APP-213ENST00000464867 RANBP1P43487 201 aa6.41□□□□□ -1.38
APP-213ENST00000464867 NKX2-1P43699 371 aaPredicted RBP6.41□□□□□ -1.38
APP-213ENST00000464867 PSG9Q00887 426 aa6.41□□□□□ -1.38
APP-213ENST00000464867 POU2AF1Q16633 256 aa6.41□□□□□ -1.38
APP-213ENST00000464867 ZIK1Q3SY52 487 aaPredicted RBP6.41□□□□□ -1.38
APP-213ENST00000464867 RXFP4Q8TDU9 374 aa6.41□□□□□ -1.38
APP-213ENST00000464867 PHYHIPQ92561 330 aa6.41□□□□□ -1.38
APP-213ENST00000464867 TMEM230Q96A57 120 aa6.41□□□□□ -1.38
APP-213ENST00000464867 PLGRKTQ9HBL7 147 aa6.41□□□□□ -1.38
APP-213ENST00000464867 OR51B2Q9Y5P1 312 aa6.41□□□□□ -1.38
APP-213ENST00000464867 A0A075B6Q4 140 aa6.4□□□□□ -1.38
APP-213ENST00000464867 TRAV9-2A0A087WT02 112 aa6.4□□□□□ -1.38
APP-213ENST00000464867 TRAV26-1A0A087WT03 109 aa6.4□□□□□ -1.38
APP-213ENST00000464867 A0A1B0GU03 582 aa6.4□□□□□ -1.38
APP-213ENST00000464867 TNFSF12O43508 249 aa6.4□□□□□ -1.38
APP-213ENST00000464867 ATP8B1O43520 1251 aa6.4□□□□□ -1.38
APP-213ENST00000464867 C1QBP02746 253 aa6.4□□□□□ -1.38
APP-213ENST00000464867 GABRB1P18505 474 aa6.4□□□□□ -1.38
APP-213ENST00000464867 M6PRP20645 277 aa6.4□□□□□ -1.38
APP-213ENST00000464867 GADD45AP24522 165 aa6.4□□□□□ -1.38
APP-213ENST00000464867 CATR1Q13166 79 aa6.4□□□□□ -1.38
APP-213ENST00000464867 EIF4EBP1Q13541 118 aaPredicted RBP6.4□□□□□ -1.38
APP-213ENST00000464867 RAB11BQ15907 218 aa6.4□□□□□ -1.38
APP-213ENST00000464867 Q6ZS49 121 aa6.4□□□□□ -1.38
APP-213ENST00000464867 C1orf158Q8N1D5 194 aa6.4□□□□□ -1.38
APP-213ENST00000464867 ZNF114Q8NC26 417 aa6.4□□□□□ -1.38
APP-213ENST00000464867 RHOXF1Q8NHV9 184 aa6.4□□□□□ -1.38
APP-213ENST00000464867 NTN5Q8WTR8 489 aaPredicted RBP6.4□□□□□ -1.38
APP-213ENST00000464867 KRTAP9-8Q9BYQ0 159 aa6.4□□□□□ -1.38
APP-213ENST00000464867 NRN1Q9NPD7 142 aa6.4□□□□□ -1.38
APP-213ENST00000464867 ARGLU1Q9NWB6 273 aaPredicted RBP6.4□□□□□ -1.38
APP-213ENST00000464867 FKBP11Q9NYL4 201 aa6.4□□□□□ -1.38
APP-213ENST00000464867 LRP2P98164 4655 aa6.4□□□□□ -1.39
APP-213ENST00000464867 IGKV1D-13A0A0B4J2D9 117 aa6.39□□□□□ -1.39
APP-213ENST00000464867 SAC3D1A6NKF1 404 aa6.39□□□□□ -1.39
APP-213ENST00000464867 DENRO43583 198 aaKnown RBP6.39□□□□□ -1.39
APP-213ENST00000464867 IGKV1-13P0DP09 117 aa6.39□□□□□ -1.39
APP-213ENST00000464867 SPATA31B1PQ5VZV4 182 aa6.39□□□□□ -1.39
APP-213ENST00000464867 EBLN2Q6P2I7 272 aa6.39□□□□□ -1.39
APP-213ENST00000464867 FOXI2Q6ZQN5 318 aa6.39□□□□□ -1.39
APP-213ENST00000464867 ZNF709Q8N972 641 aa6.39□□□□□ -1.39
APP-213ENST00000464867 OR13F1Q8NGS4 319 aa6.39□□□□□ -1.39
APP-213ENST00000464867 GLMPQ8WWB7 406 aa6.39□□□□□ -1.39
APP-213ENST00000464867 NRG4Q8WWG1 115 aa6.39□□□□□ -1.39
APP-213ENST00000464867 LINC00052Q96N35 136 aa6.39□□□□□ -1.39
APP-213ENST00000464867 SLC35B3Q9H1N7 401 aa6.39□□□□□ -1.39
APP-213ENST00000464867 SAV1Q9H4B6 383 aaPredicted RBP6.39□□□□□ -1.39
APP-213ENST00000464867 PLEKHA2Q9HB19 425 aa6.39□□□□□ -1.39
APP-213ENST00000464867 SCPEP1Q9HB40 452 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms