RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 AUNIPQ9H7T9 357 aa10.34□□□□□ -0.75
SMC1A-204ENST00000463684 IFT46Q9NQC8 304 aa10.34□□□□□ -0.75
SMC1A-204ENST00000463684 TXNL4BQ9NX01 149 aaKnown RBP10.34□□□□□ -0.75
SMC1A-204ENST00000463684 MEIS3P1A6NDR6 274 aa10.33□□□□□ -0.76
SMC1A-204ENST00000463684 HELTA6NFD8 242 aa10.33□□□□□ -0.76
SMC1A-204ENST00000463684 GPR31O00270 319 aa10.33□□□□□ -0.76
SMC1A-204ENST00000463684 S100GP29377 79 aa10.33□□□□□ -0.76
SMC1A-204ENST00000463684 RFX2P48378 723 aa10.33□□□□□ -0.76
SMC1A-204ENST00000463684 PPP5CP53041 499 aa10.33□□□□□ -0.76
SMC1A-204ENST00000463684 SCAND1P57086 179 aa10.33□□□□□ -0.76
SMC1A-204ENST00000463684 RNF167Q9H6Y7 350 aa10.33□□□□□ -0.76
SMC1A-204ENST00000463684 TEX48A0A1B0GUV7 120 aa10.32□□□□□ -0.76
SMC1A-204ENST00000463684 SMIM9A6NGZ8 99 aa10.32□□□□□ -0.76
SMC1A-204ENST00000463684 AP2S1P53680 142 aaPredicted RBP10.32□□□□□ -0.76
SMC1A-204ENST00000463684 SUB1P53999 127 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMC1A-204ENST00000463684 AQP4P55087 323 aa10.32□□□□□ -0.76
SMC1A-204ENST00000463684 SNRPD3P62318 126 aaKnown RBP10.32□□□□□ -0.76
SMC1A-204ENST00000463684 Q8N1X5 172 aa10.32□□□□□ -0.76
SMC1A-204ENST00000463684 OR5H6Q8NGV6 325 aa10.32□□□□□ -0.76
SMC1A-204ENST00000463684 SLC25A38Q96DW6 304 aa10.32□□□□□ -0.76
SMC1A-204ENST00000463684 SEC22AQ96IW7 307 aa10.32□□□□□ -0.76
SMC1A-204ENST00000463684 NEU1Q99519 415 aa10.32□□□□□ -0.76
SMC1A-204ENST00000463684 FAM212BQ9NTI7 297 aaPredicted RBP10.32□□□□□ -0.76
SMC1A-204ENST00000463684 CORTO00230 105 aa10.31□□□□□ -0.76
SMC1A-204ENST00000463684 PMP2P02689 132 aa10.31□□□□□ -0.76
SMC1A-204ENST00000463684 HTN3P15516 51 aa10.31□□□□□ -0.76
SMC1A-204ENST00000463684 TNP2Q05952 138 aa10.31□□□□□ -0.76
SMC1A-204ENST00000463684 OR6F1Q8NGZ6 308 aa10.31□□□□□ -0.76
SMC1A-204ENST00000463684 NIPSNAP3BQ9BS92 247 aa10.31□□□□□ -0.76
SMC1A-204ENST00000463684 BLOC1S6Q9UL45 172 aa10.31□□□□□ -0.76
SMC1A-204ENST00000463684 SSR3Q9UNL2 185 aa10.31□□□□□ -0.76
SMC1A-204ENST00000463684 TMED3Q9Y3Q3 217 aa10.31□□□□□ -0.76
SMC1A-204ENST00000463684 IGHV3OR16-12A0A075B7B8 117 aa10.3□□□□□ -0.76
SMC1A-204ENST00000463684 CLN5O75503 358 aa10.3□□□□□ -0.76
SMC1A-204ENST00000463684 FAM3BP58499 235 aaPredicted RBP10.3□□□□□ -0.76
SMC1A-204ENST00000463684 MXD1Q05195 221 aa10.3□□□□□ -0.76
SMC1A-204ENST00000463684 PHLDA2Q53GA4 152 aa10.3□□□□□ -0.76
SMC1A-204ENST00000463684 SPINK9Q5DT21 86 aa10.3□□□□□ -0.76
SMC1A-204ENST00000463684 IDNKQ5T6J7 187 aa10.3□□□□□ -0.76
SMC1A-204ENST00000463684 LPCAT3Q6P1A2 487 aa10.3□□□□□ -0.76
SMC1A-204ENST00000463684 OR5H2Q8NGV7 314 aa10.3□□□□□ -0.76
SMC1A-204ENST00000463684 SCRT2Q9NQ03 307 aa10.3□□□□□ -0.76
SMC1A-204ENST00000463684 RFNGQ9Y644 331 aa10.3□□□□□ -0.76
SMC1A-204ENST00000463684 ZNF705FA8MVS1 300 aaPredicted RBP10.29□□□□□ -0.76
SMC1A-204ENST00000463684 H3BMM0 161 aa10.29□□□□□ -0.76
SMC1A-204ENST00000463684 ZNF705DP0CH99 300 aaPredicted RBP10.29□□□□□ -0.76
SMC1A-204ENST00000463684 ZNF705BP0CI00 300 aaPredicted RBP10.29□□□□□ -0.76
SMC1A-204ENST00000463684 SDC2P34741 201 aa10.29□□□□□ -0.76
SMC1A-204ENST00000463684 TAS2R46P59540 309 aa10.29□□□□□ -0.76
SMC1A-204ENST00000463684 ZNF705AQ6ZN79 300 aaPredicted RBP10.29□□□□□ -0.76
SMC1A-204ENST00000463684 TBC1D26Q86UD7 250 aa10.29□□□□□ -0.76
SMC1A-204ENST00000463684 SLC35G3Q8N808 338 aa10.29□□□□□ -0.76
SMC1A-204ENST00000463684 OR4X1Q8NH49 305 aa10.29□□□□□ -0.76
SMC1A-204ENST00000463684 FXYD6Q9H0Q3 95 aa10.29□□□□□ -0.76
SMC1A-204ENST00000463684 DKK2Q9UBU2 259 aa10.29□□□□□ -0.76
SMC1A-204ENST00000463684 AGRNO00468 2067 aa10.29□□□□□ -0.76
SMC1A-204ENST00000463684 TRAV30A0A087WSZ9 112 aa10.28□□□□□ -0.76
SMC1A-204ENST00000463684 OPRK1P41145 380 aa10.28□□□□□ -0.76
SMC1A-204ENST00000463684 OXA1LQ15070 435 aa10.28□□□□□ -0.76
SMC1A-204ENST00000463684 FAM222AQ5U5X8 452 aa10.28□□□□□ -0.76
SMC1A-204ENST00000463684 C16orf54Q6UWD8 224 aa10.28□□□□□ -0.76
SMC1A-204ENST00000463684 MRGPRFQ96AM1 343 aa10.28□□□□□ -0.76
SMC1A-204ENST00000463684 ATG101Q9BSB4 218 aa10.28□□□□□ -0.76
SMC1A-204ENST00000463684 SEPSECSQ9HD40 501 aaKnown RBP10.28□□□□□ -0.76
SMC1A-204ENST00000463684 FAM90A26D6RGX4 464 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 INS-IGF2F8WCM5 200 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 IGKV1-39P01597 117 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 IGKV1D-39P04432 117 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 HNRNPCP07910 306 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMC1A-204ENST00000463684 PSMB9P28065 219 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 HOXA1P49639 335 aaPredicted RBP10.27□□□□□ -0.77
SMC1A-204ENST00000463684 TSPAN5P62079 268 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 MLANAQ16655 118 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 TIGITQ495A1 244 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 TMEM88Q6PEY1 159 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 C6orf223Q8N319 242 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 Q8WTZ3 238 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 GLMPQ8WWB7 406 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 S100A16Q96FQ6 103 aaKnown RBP10.27□□□□□ -0.77
SMC1A-204ENST00000463684 PDCD10Q9BUL8 212 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 U3KQE9 123 aa10.27□□□□□ -0.77
SMC1A-204ENST00000463684 CLEC2LP0C7M8 214 aa10.26□□□□□ -0.77
SMC1A-204ENST00000463684 RNASE2P10153 161 aaKnown RBP10.26□□□□□ -0.77
SMC1A-204ENST00000463684 HLA-DRB4P13762 266 aa10.26□□□□□ -0.77
SMC1A-204ENST00000463684 RPL5P46777 297 aaKnown RBP10.26□□□□□ -0.77
SMC1A-204ENST00000463684 C15orf53Q8NAA6 179 aa10.26□□□□□ -0.77
SMC1A-204ENST00000463684 CNBD2Q96M20 576 aa10.26□□□□□ -0.77
SMC1A-204ENST00000463684 YTHDF1Q9BYJ9 559 aaKnown RBP10.26□□□□□ -0.77
SMC1A-204ENST00000463684 FNDC4Q9H6D8 234 aaPredicted RBP10.26□□□□□ -0.77
SMC1A-204ENST00000463684 ENY2Q9NPA8 101 aa10.26□□□□□ -0.77
SMC1A-204ENST00000463684 NRN1Q9NPD7 142 aa10.26□□□□□ -0.77
SMC1A-204ENST00000463684 MRPL36Q9P0J6 103 aaKnown RBP10.26□□□□□ -0.77
SMC1A-204ENST00000463684 HLA-DRB4X5D2U9 266 aa10.26□□□□□ -0.77
SMC1A-204ENST00000463684 LRP1BQ9NZR2 4599 aa10.25□□□□□ -0.77
SMC1A-204ENST00000463684 NBDYA0A0U1RRE5 68 aa10.25□□□□□ -0.77
SMC1A-204ENST00000463684 IGKV1-17P01599 117 aa10.25□□□□□ -0.77
SMC1A-204ENST00000463684 IGKV3-20P01619 116 aa10.25□□□□□ -0.77
SMC1A-204ENST00000463684 NAT1P18440 290 aa10.25□□□□□ -0.77
SMC1A-204ENST00000463684 NKX2-1P43699 371 aaPredicted RBP10.25□□□□□ -0.77
SMC1A-204ENST00000463684 FXYD7P58549 80 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms