RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 GIPP09681 153 aaPredicted RBP8.5□□□□□ -1.05
SSR3-202ENST00000463503 RNASE2P10153 161 aaKnown RBP8.5□□□□□ -1.05
SSR3-202ENST00000463503 CXCL3P19876 107 aa8.5□□□□□ -1.05
SSR3-202ENST00000463503 HOXA1P49639 335 aaPredicted RBP8.5□□□□□ -1.05
SSR3-202ENST00000463503 SUB1P53999 127 aaKnown RBP eCLIP8.5□□□□□ -1.057e-10■■■□□ 18.2
SSR3-202ENST00000463503 RPP30P78346 268 aaKnown RBP8.5□□□□□ -1.05
SSR3-202ENST00000463503 RUNX1Q01196 453 aa8.5□□□□□ -1.05
SSR3-202ENST00000463503 ZNF616Q08AN1 781 aa8.5□□□□□ -1.05
SSR3-202ENST00000463503 USMG5Q96IX5 58 aa8.5□□□□□ -1.05
SSR3-202ENST00000463503 HINT2Q9BX68 163 aa8.5□□□□□ -1.05
SSR3-202ENST00000463503 ZNF436Q9C0F3 470 aaPredicted RBP8.5□□□□□ -1.05
SSR3-202ENST00000463503 THYN1Q9P016 225 aa8.5□□□□□ -1.05
SSR3-202ENST00000463503 DNAH2Q9P225 4427 aa8.5□□□□□ -1.05
SSR3-202ENST00000463503 RCL1Q9Y2P8 373 aaKnown RBP8.5□□□□□ -1.05
SSR3-202ENST00000463503 MUC4Q99102 2169 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 A0A0G2JLM5 398 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 FAM223BA6NKX1 122 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 WRBO00258 174 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 TSC22D2O75157 780 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 SCAF4O95104 1147 aaKnown RBP8.49□□□□□ -1.05
SSR3-202ENST00000463503 SIX6O95475 246 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 SNCAP37840 140 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 RAB9AP51151 201 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 RAP2BP61225 183 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 POLR2GP62487 172 aaKnown RBP eCLIP8.49□□□□□ -1.05
SSR3-202ENST00000463503 RAB32Q13637 225 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 FAM209BQ5JX69 171 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 FAM223AQ8IWN6 122 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 NECAP1Q8NC96 275 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 SLC24A4Q8NFF2 622 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 OR5T1Q8NG75 326 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 RNASEH2CQ8TDP1 164 aaKnown RBP8.49□□□□□ -1.05
SSR3-202ENST00000463503 DCUN1D4Q92564 292 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 UBE2E2Q96LR5 201 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 HEYLQ9NQ87 328 aaPredicted RBP8.49□□□□□ -1.05
SSR3-202ENST00000463503 GSKIPQ9P0R6 139 aa8.49□□□□□ -1.05
SSR3-202ENST00000463503 DYNC1H1Q14204 4646 aaKnown RBP8.49□□□□□ -1.05
SSR3-202ENST00000463503 OVOL1O14753 267 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 DEDDO75618 318 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 PET100P0DJ07 73 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 PVALBP20472 110 aaPredicted RBP8.48□□□□□ -1.05
SSR3-202ENST00000463503 NPY1RP25929 384 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 MFAP2P55001 183 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 PAX9P55771 341 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 FGL1Q08830 312 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 EXOSC2Q13868 293 aaKnown RBP8.48□□□□□ -1.05
SSR3-202ENST00000463503 HAGHQ16775 308 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 SPINK9Q5DT21 86 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 TMEM65Q6PI78 240 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 ZNF491Q8N8L2 437 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 OR1N2Q8NGR9 330 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 VN1R17PQ8TDU5 208 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 PPP1R1CQ8WVI7 109 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 DMRT1Q9Y5R6 373 aa8.48□□□□□ -1.05
SSR3-202ENST00000463503 C15orf62A8K5M9 175 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 NXPH3O95157 252 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 MPC2O95563 127 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 TMEM50AO95807 157 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 SCGB1D2O95969 90 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 TRGV3P03979 118 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 RLN2P04090 185 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 REG1AP05451 166 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 APELAP0DMC3 54 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 DEFA4P12838 97 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 FCGR2BP31994 310 aaPredicted RBP8.47□□□□□ -1.05
SSR3-202ENST00000463503 ACSM6Q6P461 480 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 TMEM14EPQ6UXP3 125 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 TMEM170AQ8WVE7 144 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 DLX4Q92988 240 aaPredicted RBP8.47□□□□□ -1.05
SSR3-202ENST00000463503 CXorf58Q96LI9 332 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 MAGT1Q9H0U3 335 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 KLK15Q9H2R5 256 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 RETNQ9HD89 108 aa8.47□□□□□ -1.05
SSR3-202ENST00000463503 E5RGE8 158 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 I3L2K1 104 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 K7EIM0 57 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 SSSCA1O60232 199 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 IAPPP10997 89 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 P2RY1P47900 373 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 SLURP1P55000 103 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 TPPP2P59282 170 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 RAB11AP62491 216 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 RHOGP84095 191 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 SLC25A24Q6NUK1 477 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 ZNF343Q6P1L6 599 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 PRSS54Q6PEW0 395 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 HAPLN4Q86UW8 402 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 CACNG8Q8WXS5 425 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 RNF126Q9BV68 326 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 LYRM2Q9NU23 88 aaPredicted RBP8.46□□□□□ -1.06
SSR3-202ENST00000463503 PSENENQ9NZ42 101 aa8.46□□□□□ -1.06
SSR3-202ENST00000463503 STRAPQ9Y3F4 350 aaKnown RBP8.46□□□□□ -1.06
SSR3-202ENST00000463503 LSM5Q9Y4Y9 91 aaKnown RBP8.46□□□□□ -1.06
SSR3-202ENST00000463503 TRBV7-1A0A0A6YYK4 115 aa8.45□□□□□ -1.06
SSR3-202ENST00000463503 RPS10-NUDT3A0A1W2PQS6 291 aa8.45□□□□□ -1.06
SSR3-202ENST00000463503 PMS2P5A8MQ11 134 aa8.45□□□□□ -1.06
SSR3-202ENST00000463503 PRSS46E5RG02 174 aa8.45□□□□□ -1.06
SSR3-202ENST00000463503 FNDC10F2Z333 226 aa8.45□□□□□ -1.06
SSR3-202ENST00000463503 H0YIZ8 118 aa8.45□□□□□ -1.06
SSR3-202ENST00000463503 L7N2F9 121 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms