RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 APOC3P02656 99 aa13.74□□□□□ -0.21
CDK11A-209ENST00000460465 SFTA3P0C7M3 94 aa13.74□□□□□ -0.21
CDK11A-209ENST00000460465 ETFRF1Q6IPR1 90 aa13.74□□□□□ -0.21
CDK11A-209ENST00000460465 NPIPB3Q92617 1050 aa13.74□□□□□ -0.21
CDK11A-209ENST00000460465 RASL11BQ9BPW5 248 aa13.74□□□□□ -0.21
CDK11A-209ENST00000460465 SLC25A33Q9BSK2 321 aa13.74□□□□□ -0.21
CDK11A-209ENST00000460465 POLQO75417 2590 aa13.74□□□□□ -0.21
CDK11A-209ENST00000460465 SEC14L6B5MCN3 397 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 F8W036 122 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 CRYGCP07315 174 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 LINC00869P0C866 280 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 IGHV4-31P0DP07 118 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 GNG13Q9P2W3 67 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.73□□□□□ -0.219e-9■■■■■ 38
CDK11A-209ENST00000460465 PTPN13Q12923 2485 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 IGHV3-21A0A0B4J1V1 117 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 IGHV7-81A0A0B4J1V7 117 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 HLA-DRB1P01911 266 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 PPT1P50897 306 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 RND2P52198 227 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 BTN1A1Q13410 526 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 ASPHD1Q5U4P2 390 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 PRSS57Q6UWY2 283 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 LINC00469Q8N7U9 141 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 PIFOQ8TCI5 191 aa13.73□□□□□ -0.21
CDK11A-209ENST00000460465 CENPEQ02224 2701 aa13.72□□□□□ -0.21
CDK11A-209ENST00000460465 GATA2P23769 480 aaPredicted RBP13.72□□□□□ -0.21
CDK11A-209ENST00000460465 A0A1W2PPV4 95 aa13.72□□□□□ -0.21
CDK11A-209ENST00000460465 J3QLI3 93 aa13.72□□□□□ -0.21
CDK11A-209ENST00000460465 MT-CO2P00403 227 aa13.72□□□□□ -0.21
CDK11A-209ENST00000460465 TMEM249Q2WGJ8 235 aa13.72□□□□□ -0.21
CDK11A-209ENST00000460465 C10orf91Q5T1B1 145 aa13.72□□□□□ -0.21
CDK11A-209ENST00000460465 TMEM219Q86XT9 240 aa13.72□□□□□ -0.21
CDK11A-209ENST00000460465 THAP8Q8NA92 274 aa13.72□□□□□ -0.21
CDK11A-209ENST00000460465 SSX3Q99909 188 aa13.72□□□□□ -0.21
CDK11A-209ENST00000460465 HSPB9Q9BQS6 159 aa13.72□□□□□ -0.21
CDK11A-209ENST00000460465 ZFP92A6NM28 416 aa13.71□□□□□ -0.21
CDK11A-209ENST00000460465 ICAM4Q14773 271 aa13.71□□□□□ -0.21
CDK11A-209ENST00000460465 ZNF506Q5JVG8 444 aa13.71□□□□□ -0.21
CDK11A-209ENST00000460465 CYP2G1PQ6ZSU1 146 aa13.71□□□□□ -0.21
CDK11A-209ENST00000460465 SEC11CQ9BY50 192 aa13.71□□□□□ -0.21
CDK11A-209ENST00000460465 IGKV1D-37A0A075B6S9 117 aa13.7□□□□□ -0.22
CDK11A-209ENST00000460465 LOC102723971A0A1B0GUV8 181 aa13.7□□□□□ -0.22
CDK11A-209ENST00000460465 EGR2P11161 476 aaPredicted RBP13.7□□□□□ -0.22
CDK11A-209ENST00000460465 DEFA5Q01523 94 aa13.7□□□□□ -0.22
CDK11A-209ENST00000460465 RBM14Q96PK6 669 aaKnown RBP13.7□□□□□ -0.22
CDK11A-209ENST00000460465 TMPRSS5Q9H3S3 457 aa13.7□□□□□ -0.22
CDK11A-209ENST00000460465 SVEP1Q4LDE5 3571 aa13.7□□□□□ -0.22
CDK11A-209ENST00000460465 NPIPB5A8MRT5 1133 aa13.7□□□□□ -0.22
CDK11A-209ENST00000460465 I3L2K1 104 aa13.7□□□□□ -0.22
CDK11A-209ENST00000460465 FBP1P09467 338 aa13.7□□□□□ -0.22
CDK11A-209ENST00000460465 C5orf56Q8N8D9 126 aa13.7□□□□□ -0.22
CDK11A-209ENST00000460465 RXFP4Q8TDU9 374 aa13.7□□□□□ -0.22
CDK11A-209ENST00000460465 C22orf15Q8WYQ4 148 aa13.7□□□□□ -0.22
CDK11A-209ENST00000460465 CARHSP1Q9Y2V2 147 aaKnown RBP13.7□□□□□ -0.22
CDK11A-209ENST00000460465 APCP25054 2843 aa13.69□□□□□ -0.22
CDK11A-209ENST00000460465 TCRBV4S1A1TA0A5B7 111 aa13.69□□□□□ -0.22
CDK11A-209ENST00000460465 OR1L6Q8NGR2 347 aa13.69□□□□□ -0.22
CDK11A-209ENST00000460465 SMDT1Q9H4I9 107 aa13.69□□□□□ -0.22
CDK11A-209ENST00000460465 MOB4Q9Y3A3 225 aa13.69□□□□□ -0.22
CDK11A-209ENST00000460465 ABCA12Q86UK0 2595 aa13.69□□□□□ -0.22
CDK11A-209ENST00000460465 SH2D7A6NKC9 451 aaPredicted RBP13.69□□□□□ -0.22
CDK11A-209ENST00000460465 BCL2P10415 239 aa13.69□□□□□ -0.22
CDK11A-209ENST00000460465 ZNF90Q03938 601 aa13.69□□□□□ -0.22
CDK11A-209ENST00000460465 GUCA2BQ16661 112 aa13.69□□□□□ -0.22
CDK11A-209ENST00000460465 TTC9CQ8N5M4 171 aa13.69□□□□□ -0.22
CDK11A-209ENST00000460465 TMEM116Q8NCL8 245 aa13.69□□□□□ -0.22
CDK11A-209ENST00000460465 RHOBP62745 196 aa13.68□□□□□ -0.22
CDK11A-209ENST00000460465 KHDC3LQ587J8 217 aa13.68□□□□□ -0.22
CDK11A-209ENST00000460465 SPATA31B1PQ5VZV4 182 aa13.68□□□□□ -0.22
CDK11A-209ENST00000460465 SLC35B3Q9H1N7 401 aa13.68□□□□□ -0.22
CDK11A-209ENST00000460465 SEPSECSQ9HD40 501 aaKnown RBP13.68□□□□□ -0.22
CDK11A-209ENST00000460465 H3BUX3 64 aa13.68□□□□□ -0.22
CDK11A-209ENST00000460465 IFNA1P01562 189 aa13.68□□□□□ -0.22
CDK11A-209ENST00000460465 CELSR1Q9NYQ6 3014 aa13.68□□□□□ -0.22
CDK11A-209ENST00000460465 K7EIM0 57 aa13.67□□□□□ -0.22
CDK11A-209ENST00000460465 ATP6V0E1O15342 81 aa13.67□□□□□ -0.22
CDK11A-209ENST00000460465 TNFRSF19Q9NS68 423 aa13.67□□□□□ -0.22
CDK11A-209ENST00000460465 HSPB1P04792 205 aaKnown RBP13.67□□□□□ -0.22
CDK11A-209ENST00000460465 SRP19P09132 144 aaKnown RBP13.67□□□□□ -0.22
CDK11A-209ENST00000460465 STAG3L2P0CL84 134 aa13.67□□□□□ -0.22
CDK11A-209ENST00000460465 STAG3L3P0CL85 134 aa13.67□□□□□ -0.22
CDK11A-209ENST00000460465 PMS2P11Q13670 270 aa13.67□□□□□ -0.22
CDK11A-209ENST00000460465 LY6EQ16553 131 aa13.67□□□□□ -0.22
CDK11A-209ENST00000460465 ATRAIDQ6UW56 229 aa13.67□□□□□ -0.22
CDK11A-209ENST00000460465 OR5T1Q8NG75 326 aa13.67□□□□□ -0.22
CDK11A-209ENST00000460465 SGMS2Q8NHU3 365 aa13.67□□□□□ -0.22
CDK11A-209ENST00000460465 FANCD2OSQ96PS1 177 aa13.67□□□□□ -0.22
CDK11A-209ENST00000460465 MAP1AP78559 2803 aaPredicted RBP13.66□□□□□ -0.22
CDK11A-209ENST00000460465 IGLV11-55A0A075B6I3 123 aa13.66□□□□□ -0.22
CDK11A-209ENST00000460465 MDFIC2A0A1B0GVS7 189 aa13.66□□□□□ -0.22
CDK11A-209ENST00000460465 ARL14EPLP0DKL9 152 aa13.66□□□□□ -0.22
CDK11A-209ENST00000460465 FAM78BQ5VT40 261 aa13.66□□□□□ -0.22
CDK11A-209ENST00000460465 SLC35E3Q7Z769 313 aa13.66□□□□□ -0.22
CDK11A-209ENST00000460465 SVBPQ8N300 66 aa13.66□□□□□ -0.22
CDK11A-209ENST00000460465 GATAD1Q8WUU5 269 aa13.66□□□□□ -0.22
CDK11A-209ENST00000460465 TRGV9Q99603 122 aa13.66□□□□□ -0.22
CDK11A-209ENST00000460465 GSX1Q9H4S2 264 aaPredicted RBP13.66□□□□□ -0.22
CDK11A-209ENST00000460465 AMY1AP04745 511 aa13.65□□□□□ -0.22
CDK11A-209ENST00000460465 SELENOTP62341 195 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms