RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 SLC25A6P12236 298 aa15.67■□□□□ 0.1
VARS-218ENST00000459667 ANXA7P20073 488 aaKnown RBP15.67■□□□□ 0.1
VARS-218ENST00000459667 HTR2BP41595 481 aa15.67■□□□□ 0.1
VARS-218ENST00000459667 TNFRSF9Q07011 255 aa15.67■□□□□ 0.1
VARS-218ENST00000459667 DHRS2Q13268 280 aa15.67■□□□□ 0.1
VARS-218ENST00000459667 ASAH1Q13510 395 aa15.67■□□□□ 0.1
VARS-218ENST00000459667 BSXQ3C1V8 233 aa15.67■□□□□ 0.1
VARS-218ENST00000459667 MARC2Q969Z3 335 aa15.67■□□□□ 0.1
VARS-218ENST00000459667 MLXQ9UH92 298 aa15.67■□□□□ 0.1
VARS-218ENST00000459667 SELENOKQ9Y6D0 94 aa15.67■□□□□ 0.1
VARS-218ENST00000459667 HOXB5P09067 269 aa15.66■□□□□ 0.1
VARS-218ENST00000459667 RELQ04864 619 aaPredicted RBP15.66■□□□□ 0.1
VARS-218ENST00000459667 C11orf87Q6NUJ2 197 aa15.66■□□□□ 0.1
VARS-218ENST00000459667 NOXA1Q86UR1 476 aa15.66■□□□□ 0.1
VARS-218ENST00000459667 DUSP18Q8NEJ0 188 aa15.66■□□□□ 0.1
VARS-218ENST00000459667 ASCL2Q99929 193 aa15.66■□□□□ 0.1
VARS-218ENST00000459667 C20orf24Q9BUV8 137 aa15.66■□□□□ 0.1
VARS-218ENST00000459667 DAZ1Q9NQZ3 744 aaKnown RBP15.66■□□□□ 0.1
VARS-218ENST00000459667 MRPL27Q9P0M9 148 aaKnown RBP15.66■□□□□ 0.1
VARS-218ENST00000459667 HSPB7Q9UBY9 170 aa15.66■□□□□ 0.1
VARS-218ENST00000459667 TBC1D24Q9ULP9 559 aa15.66■□□□□ 0.1
VARS-218ENST00000459667 DNAH9Q9NYC9 4486 aa15.65■□□□□ 0.1
VARS-218ENST00000459667 IFNA21P01568 189 aa15.65■□□□□ 0.1
VARS-218ENST00000459667 FRMD6-AS1P0C7T7 363 aa15.65■□□□□ 0.1
VARS-218ENST00000459667 C8orf88P0DMB2 117 aa15.65■□□□□ 0.1
VARS-218ENST00000459667 OPRK1P41145 380 aa15.65■□□□□ 0.1
VARS-218ENST00000459667 NPBWR1P48145 328 aa15.65■□□□□ 0.1
VARS-218ENST00000459667 GUCA2BQ16661 112 aa15.65■□□□□ 0.1
VARS-218ENST00000459667 BTNL8Q6UX41 500 aa15.65■□□□□ 0.1
VARS-218ENST00000459667 WDR89Q96FK6 387 aaPredicted RBP15.65■□□□□ 0.1
VARS-218ENST00000459667 NUDT15Q9NV35 164 aa15.65■□□□□ 0.1
VARS-218ENST00000459667 TRAV6A0A075B6T7 132 aa15.64■□□□□ 0.09
VARS-218ENST00000459667 IGHV3OR16-8A0A075B7F1 116 aa15.64■□□□□ 0.09
VARS-218ENST00000459667 ZNF785A8K8V0 405 aa15.64■□□□□ 0.09
VARS-218ENST00000459667 NHLRC4P0CG21 123 aaPredicted RBP15.64■□□□□ 0.09
VARS-218ENST00000459667 IGHV4-30-4P0DP06 118 aa15.64■□□□□ 0.09
VARS-218ENST00000459667 TMEM61Q8N0U2 210 aa15.64■□□□□ 0.09
VARS-218ENST00000459667 SLC24A4Q8NFF2 622 aa15.64■□□□□ 0.09
VARS-218ENST00000459667 ENKURQ8TC29 256 aa15.64■□□□□ 0.09
VARS-218ENST00000459667 FNDC4Q9H6D8 234 aaPredicted RBP15.64■□□□□ 0.09
VARS-218ENST00000459667 RPS10-NUDT3A0A1W2PQS6 291 aa15.63■□□□□ 0.09
VARS-218ENST00000459667 FAM90A26D6RGX4 464 aa15.63■□□□□ 0.09
VARS-218ENST00000459667 MED6O75586 246 aa15.63■□□□□ 0.09
VARS-218ENST00000459667 H2AFB2P0C5Z0 115 aa15.63■□□□□ 0.09
VARS-218ENST00000459667 DEFA1P59665 94 aa15.63■□□□□ 0.09
VARS-218ENST00000459667 DEFA3P59666 94 aa15.63■□□□□ 0.09
VARS-218ENST00000459667 C2orf83Q53S99 150 aa15.63■□□□□ 0.09
VARS-218ENST00000459667 GGNBP1Q5YKI7 109 aa15.63■□□□□ 0.09
VARS-218ENST00000459667 DTD1Q8TEA8 209 aa15.63■□□□□ 0.09
VARS-218ENST00000459667 ZNF414Q96IQ9 312 aa15.63■□□□□ 0.09
VARS-218ENST00000459667 PITX3O75364 302 aa15.62■□□□□ 0.09
VARS-218ENST00000459667 SCGB2A1O75556 95 aa15.62■□□□□ 0.09
VARS-218ENST00000459667 YIF1AO95070 293 aa15.62■□□□□ 0.09
VARS-218ENST00000459667 CD81P60033 236 aa15.62■□□□□ 0.09
VARS-218ENST00000459667 RBKSQ9H477 322 aa15.62■□□□□ 0.09
VARS-218ENST00000459667 U3KQ87 197 aa15.62■□□□□ 0.09
VARS-218ENST00000459667 C15orf62A8K5M9 175 aa15.61■□□□□ 0.09
VARS-218ENST00000459667 A8MZ25 164 aa15.61■□□□□ 0.09
VARS-218ENST00000459667 K7EMT4 169 aa15.61■□□□□ 0.09
VARS-218ENST00000459667 ZNF207O43670 478 aaKnown RBP15.61■□□□□ 0.09
VARS-218ENST00000459667 IFNA10P01566 189 aa15.61■□□□□ 0.09
VARS-218ENST00000459667 NPY1RP25929 384 aa15.61■□□□□ 0.09
VARS-218ENST00000459667 ATP5IP56385 69 aaPredicted RBP15.61■□□□□ 0.09
VARS-218ENST00000459667 MLANAQ16655 118 aa15.61■□□□□ 0.09
VARS-218ENST00000459667 SBSPONQ8IVN8 264 aa15.61■□□□□ 0.09
VARS-218ENST00000459667 RNASEH2CQ8TDP1 164 aaKnown RBP15.61■□□□□ 0.09
VARS-218ENST00000459667 MITD1Q8WV92 249 aa15.61■□□□□ 0.09
VARS-218ENST00000459667 NEURL2Q9BR09 285 aa15.61■□□□□ 0.09
VARS-218ENST00000459667 MRPL36Q9P0J6 103 aaKnown RBP15.61■□□□□ 0.09
VARS-218ENST00000459667 COL7A1Q02388 2944 aa15.61■□□□□ 0.09
VARS-218ENST00000459667 ADAP1O75689 374 aa15.6■□□□□ 0.09
VARS-218ENST00000459667 SCAF4O95104 1147 aaKnown RBP15.6■□□□□ 0.09
VARS-218ENST00000459667 TMEM50AO95807 157 aa15.6■□□□□ 0.09
VARS-218ENST00000459667 ETFRF1Q6IPR1 90 aa15.6■□□□□ 0.09
VARS-218ENST00000459667 RBPMS2Q6ZRY4 209 aaKnown RBP15.6■□□□□ 0.09
VARS-218ENST00000459667 TMEM170AQ8WVE7 144 aa15.6■□□□□ 0.09
VARS-218ENST00000459667 C19orf73Q9NVV2 129 aa15.6■□□□□ 0.09
VARS-218ENST00000459667 TRAV25A0A0B4J276 109 aa15.59■□□□□ 0.09
VARS-218ENST00000459667 CLN5O75503 358 aa15.59■□□□□ 0.09
VARS-218ENST00000459667 CD7P09564 240 aa15.59■□□□□ 0.09
VARS-218ENST00000459667 ZNF600Q6ZNG1 722 aa15.59■□□□□ 0.09
VARS-218ENST00000459667 OR52B4Q8NGK2 314 aa15.59■□□□□ 0.09
VARS-218ENST00000459667 OR4X1Q8NH49 305 aa15.59■□□□□ 0.09
VARS-218ENST00000459667 OR10C1Q96KK4 312 aa15.59■□□□□ 0.09
VARS-218ENST00000459667 CIB3Q96Q77 187 aaPredicted RBP15.59■□□□□ 0.09
VARS-218ENST00000459667 RPP30P78346 268 aaKnown RBP15.58■□□□□ 0.08
VARS-218ENST00000459667 IFITM3Q01628 133 aa15.58■□□□□ 0.08
VARS-218ENST00000459667 ZNF431Q8TF32 576 aaPredicted RBP15.58■□□□□ 0.08
VARS-218ENST00000459667 TUBA4BQ9H853 241 aa15.58■□□□□ 0.08
VARS-218ENST00000459667 IGHV7-4-1A0A0J9YVY3 117 aa15.57■□□□□ 0.08
VARS-218ENST00000459667 WRBO00258 174 aa15.57■□□□□ 0.08
VARS-218ENST00000459667 SYNGR2O43760 224 aa15.57■□□□□ 0.08
VARS-218ENST00000459667 SLC25A4P12235 298 aa15.57■□□□□ 0.08
VARS-218ENST00000459667 TOMM20LQ6UXN7 152 aa15.57■□□□□ 0.08
VARS-218ENST00000459667 SLC16A13Q7RTY0 426 aa15.57■□□□□ 0.08
VARS-218ENST00000459667 GINS3Q9BRX5 216 aa15.57■□□□□ 0.08
VARS-218ENST00000459667 SMPXQ9UHP9 88 aa15.57■□□□□ 0.08
VARS-218ENST00000459667 PUS1Q9Y606 427 aaKnown RBP eCLIP15.57■□□□□ 0.08
VARS-218ENST00000459667 U3KQK5 164 aa15.57■□□□□ 0.08
VARS-218ENST00000459667 TRAV14DV4A0A0A6YYC5 116 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms