RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 TRAV14DV4A0A0A6YYC5 116 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 IGHV3-74A0A0B4J1X5 117 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 IGHV7-4-1A0A0J9YVY3 117 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 C15orf61A6NNL5 157 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 MPTX1A8MV57 137 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 CHEK1O14757 476 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 GNG7O60262 68 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 MT-CO2P00403 227 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 IGHV3-48P01763 117 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 EIF4EP06730 217 aaKnown RBP6.05□□□□□ -1.44
LINC01888-202ENST00000457602 CTSGP08311 255 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 GCSHP23434 173 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 PAFAH1B2P68402 229 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 LPCAT3Q6P1A2 487 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 H2BFWTQ7Z2G1 175 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 TBC1D26Q86UD7 250 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 OR1P1Q8NH06 330 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 PHLDA1Q8WV24 401 aaPredicted RBP6.05□□□□□ -1.44
LINC01888-202ENST00000457602 RARRES2Q99969 163 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 CSTL1Q9H114 145 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 ANAPC10Q9UM13 185 aa6.05□□□□□ -1.44
LINC01888-202ENST00000457602 SMIM31A0A1B0GVY4 71 aa6.04□□□□□ -1.44
LINC01888-202ENST00000457602 I3L2K1 104 aa6.04□□□□□ -1.44
LINC01888-202ENST00000457602 ERHP84090 104 aaKnown RBP6.04□□□□□ -1.44
LINC01888-202ENST00000457602 KCTD21Q4G0X4 260 aa6.04□□□□□ -1.44
LINC01888-202ENST00000457602 SNX29P2Q8IUI4 249 aa6.04□□□□□ -1.44
LINC01888-202ENST00000457602 CADM3Q8N126 398 aa6.04□□□□□ -1.44
LINC01888-202ENST00000457602 MRGPRFQ96AM1 343 aa6.04□□□□□ -1.44
LINC01888-202ENST00000457602 TXN2Q99757 166 aa6.04□□□□□ -1.44
LINC01888-202ENST00000457602 GINS3Q9BRX5 216 aa6.04□□□□□ -1.44
LINC01888-202ENST00000457602 NXF2Q9GZY0 626 aaKnown RBP6.04□□□□□ -1.44
LINC01888-202ENST00000457602 VCX3AQ9NNX9 186 aa6.04□□□□□ -1.44
LINC01888-202ENST00000457602 TMEM14BQ9NUH8 114 aa6.04□□□□□ -1.44
LINC01888-202ENST00000457602 COMMD3Q9UBI1 195 aa6.04□□□□□ -1.44
LINC01888-202ENST00000457602 FBXL17Q9UF56 701 aa6.04□□□□□ -1.44
LINC01888-202ENST00000457602 IGHV3-66A0A0C4DH42 116 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 DNASE2O00115 360 aaPredicted RBP6.03□□□□□ -1.44
LINC01888-202ENST00000457602 ST8SIA3O43173 380 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 DEDDO75618 318 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 CA1P00915 261 aaPredicted RBP6.03□□□□□ -1.44
LINC01888-202ENST00000457602 PGAM2P15259 253 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 SNCAP37840 140 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 NPBWR1P48145 328 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 HSPE1P61604 102 aaKnown RBP6.03□□□□□ -1.44
LINC01888-202ENST00000457602 PRCDQ00LT1 54 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 SPINK9Q5DT21 86 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 TCF24Q7RTU0 167 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 RPP25LQ8N5L8 163 aaKnown RBP6.03□□□□□ -1.44
LINC01888-202ENST00000457602 DUSP18Q8NEJ0 188 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 OR11H2Q8NH07 326 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 C11orf45Q8TAV5 145 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 GPX8Q8TED1 209 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 GATAD1Q8WUU5 269 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 SEC22AQ96IW7 307 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 OR10C1Q96KK4 312 aa6.03□□□□□ -1.44
LINC01888-202ENST00000457602 FAM212BQ9NTI7 297 aaPredicted RBP6.03□□□□□ -1.44
LINC01888-202ENST00000457602 DEFB4AO15263 64 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 IFNA17P01571 189 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 IGKV1-39P01597 117 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 APOHP02749 345 aaPredicted RBP6.02□□□□□ -1.45
LINC01888-202ENST00000457602 IGKV1D-39P04432 117 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 IFNA4P05014 189 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 RCVRNP35243 200 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 AKR1C2P52895 323 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 DEFB131AP59861 70 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 NANOS2P60321 138 aaKnown RBP6.02□□□□□ -1.45
LINC01888-202ENST00000457602 FOXI1Q12951 378 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 TMEM187Q14656 261 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 RBMS2Q15434 407 aaKnown RBP6.02□□□□□ -1.45
LINC01888-202ENST00000457602 IZUMO4Q1ZYL8 232 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 RNASE12Q5GAN4 147 aaKnown RBP6.02□□□□□ -1.45
LINC01888-202ENST00000457602 FAM90A2PQ658T7 463 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 LEMD1Q68G75 181 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 LGALS9CQ6DKI2 356 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 TOMM20LQ6UXN7 152 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 ZNF575Q86XF7 245 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 SLC35G3Q8N808 338 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 ZNF114Q8NC26 417 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 YIPF6Q96EC8 236 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 ZNF414Q96IQ9 312 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 PDCD10Q9BUL8 212 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 MFFQ9GZY8 342 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 RABAC1Q9UI14 185 aa6.02□□□□□ -1.45
LINC01888-202ENST00000457602 PUS1Q9Y606 427 aaKnown RBP eCLIP6.02□□□□□ -1.45
LINC01888-202ENST00000457602 A0A087WXM4 84 aa6.01□□□□□ -1.45
LINC01888-202ENST00000457602 M0QYG6 137 aa6.01□□□□□ -1.45
LINC01888-202ENST00000457602 CORTO00230 105 aa6.01□□□□□ -1.45
LINC01888-202ENST00000457602 DFFBO76075 338 aa6.01□□□□□ -1.45
LINC01888-202ENST00000457602 APOA1P02647 267 aa6.01□□□□□ -1.45
LINC01888-202ENST00000457602 CD5P06127 495 aa6.01□□□□□ -1.45
LINC01888-202ENST00000457602 SUB1P53999 127 aaKnown RBP eCLIP6.01□□□□□ -1.45
LINC01888-202ENST00000457602 UCP3P55916 312 aa6.01□□□□□ -1.45
LINC01888-202ENST00000457602 BLOC1S1P78537 153 aa6.01□□□□□ -1.45
LINC01888-202ENST00000457602 TRIM16LQ309B1 348 aa6.01□□□□□ -1.45
LINC01888-202ENST00000457602 ZNF600Q6ZNG1 722 aa6.01□□□□□ -1.45
LINC01888-202ENST00000457602 STHQ8IWL8 128 aa6.01□□□□□ -1.45
LINC01888-202ENST00000457602 RNASE11Q8TAA1 199 aaKnown RBP6.01□□□□□ -1.45
LINC01888-202ENST00000457602 MS4A6AQ9H2W1 248 aa6.01□□□□□ -1.45
LINC01888-202ENST00000457602 TMEM231Q9H6L2 316 aa6.01□□□□□ -1.45
LINC01888-202ENST00000457602 SCPEP1Q9HB40 452 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms