RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 ST20Q9HBF5 79 aa10.06□□□□□ -0.8
SEC16A-207ENST00000453963 MYO7BQ6PIF6 2116 aa10.06□□□□□ -0.8
SEC16A-207ENST00000453963 A0A1W2PRS3 328 aa10.06□□□□□ -0.8
SEC16A-207ENST00000453963 STAG3L3P0CL85 134 aa10.06□□□□□ -0.8
SEC16A-207ENST00000453963 SCGB1A1P11684 91 aa10.06□□□□□ -0.8
SEC16A-207ENST00000453963 FAM27E3Q08E93 113 aa10.06□□□□□ -0.8
SEC16A-207ENST00000453963 AGMATQ9BSE5 352 aa10.06□□□□□ -0.8
SEC16A-207ENST00000453963 OTORQ9NRC9 128 aa10.06□□□□□ -0.8
SEC16A-207ENST00000453963 IGHV3-35A0A0C4DH35 117 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 H3BUT2 72 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 RAMP3O60896 148 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 LINC00614P0C842 121 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 MRPL52Q86TS9 123 aaKnown RBP10.05□□□□□ -0.8
SEC16A-207ENST00000453963 ARL6IP6Q8N6S5 226 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 GEMIN7Q9H840 131 aaKnown RBP10.05□□□□□ -0.8
SEC16A-207ENST00000453963 LOC102723996A0A087X1L8 192 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 PI4KAP42356 2102 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 QRFPP83859 136 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 CENPVQ7Z7K6 275 aaPredicted RBP10.05□□□□□ -0.8
SEC16A-207ENST00000453963 VCX2Q9H322 139 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 CFPP27918 469 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 ATP5L2Q7Z4Y8 100 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 LINC01551Q86U37 167 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 RPP25LQ8N5L8 163 aaKnown RBP10.05□□□□□ -0.8
SEC16A-207ENST00000453963 LINC01560Q8TB33 94 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 CHCHD1Q96BP2 118 aaKnown RBP10.05□□□□□ -0.8
SEC16A-207ENST00000453963 FOXC2Q99958 501 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 EPDR1Q9UM22 224 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 A0A0G2JMM0 328 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 A0A1W2PPB8 328 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 KIR3DP1A8MWS1 328 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 ZNF56Q15929 161 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 FAM74A4Q5TZK3 123 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 DUX5Q96PT3 197 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 PCNX1Q96RV3 2341 aa10.05□□□□□ -0.8
SEC16A-207ENST00000453963 E9PQ18 207 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 ZFP36L1Q07352 338 aaKnown RBP10.04□□□□□ -0.8
SEC16A-207ENST00000453963 LINC00312Q9Y6C7 94 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 C9JCJ5 164 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 MORN2Q502X0 79 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 MEIG1Q5JSS6 88 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 FER1L6-AS1Q8NA97 138 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 DERL1Q9BUN8 251 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 MRPS16Q9Y3D3 137 aaKnown RBP10.04□□□□□ -0.8
SEC16A-207ENST00000453963 DUTP33316 252 aaKnown RBP10.04□□□□□ -0.8
SEC16A-207ENST00000453963 SEC11AP67812 179 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 CD69Q07108 199 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 ACTL10Q5JWF8 245 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 OR5A1Q8NGJ0 315 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 TSKUQ8WUA8 353 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 SSBP4Q9BWG4 385 aaPredicted RBP10.04□□□□□ -0.8
SEC16A-207ENST00000453963 MRPL20Q9BYC9 149 aaKnown RBP10.04□□□□□ -0.8
SEC16A-207ENST00000453963 ZNF257Q9Y2Q1 563 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.04□□□□□ -0.83e-7■■■■□ 20.9
SEC16A-207ENST00000453963 IGHV2OR16-5A0A0B4J2B6 119 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 TMEM14EPQ6UXP3 125 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 DEPPQ9NTK1 212 aa10.04□□□□□ -0.8
SEC16A-207ENST00000453963 TRGV3P03979 118 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 SAA1P0DJI8 122 aaPredicted RBP10.03□□□□□ -0.8
SEC16A-207ENST00000453963 GCSAMLQ5JQS6 135 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 FAM216BQ8N7L0 139 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 TREML4Q6UXN2 200 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 MS4A6AQ9H2W1 248 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 FBXL15Q9H469 300 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 EMP1P54849 157 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 PRCDQ00LT1 54 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 MST1LQ2TV78 715 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 SAMD13Q5VXD3 122 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 NEU4Q8WWR8 484 aaPredicted RBP10.03□□□□□ -0.8
SEC16A-207ENST00000453963 SCGB3A1Q96QR1 104 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 SPOCK3Q9BQ16 436 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 SAA2-SAA4A0A096LPE2 208 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 A0A0G2JLM5 398 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 H7C1H1 209 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 HAX1O00165 279 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 CEACAM4O75871 244 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 HBDP02042 147 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 SAA2P0DJI9 122 aaPredicted RBP10.03□□□□□ -0.8
SEC16A-207ENST00000453963 LDLRAD2Q5SZI1 272 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 FAM57AQ8TBR7 257 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 ORAOV1Q8WV07 137 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 NABP1Q96AH0 204 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 LTBP1Q14766 1721 aa10.03□□□□□ -0.8
SEC16A-207ENST00000453963 DOCK8Q8NF50 2099 aa10.02□□□□□ -0.8
SEC16A-207ENST00000453963 TCRBV4S1A1TA0A5B7 111 aa10.02□□□□□ -0.8
SEC16A-207ENST00000453963 EFNA2O43921 213 aa10.02□□□□□ -0.8
SEC16A-207ENST00000453963 OR9G9P0C7N8 305 aa10.02□□□□□ -0.8
SEC16A-207ENST00000453963 TMEM170BQ5T4T1 132 aa10.02□□□□□ -0.8
SEC16A-207ENST00000453963 GGTLC1Q9BX51 225 aa10.02□□□□□ -0.8
SEC16A-207ENST00000453963 LY96Q9Y6Y9 160 aa10.02□□□□□ -0.8
SEC16A-207ENST00000453963 IGHV3OR16-13A0A075B7E8 117 aa10.02□□□□□ -0.81
SEC16A-207ENST00000453963 IGHV3-74A0A0B4J1X5 117 aa10.02□□□□□ -0.81
SEC16A-207ENST00000453963 IGHV1-2P23083 117 aa10.02□□□□□ -0.81
SEC16A-207ENST00000453963 RASL11AQ6T310 242 aa10.02□□□□□ -0.81
SEC16A-207ENST00000453963 C21orf62Q9NYP8 219 aa10.02□□□□□ -0.81
SEC16A-207ENST00000453963 FOXA2Q9Y261 457 aaPredicted RBP10.02□□□□□ -0.81
SEC16A-207ENST00000453963 ZIC4Q8N9L1 334 aa10.02□□□□□ -0.81
SEC16A-207ENST00000453963 A6NNC1 897 aa10.02□□□□□ -0.81
SEC16A-207ENST00000453963 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.02□□□□□ -0.81
SEC16A-207ENST00000453963 NDUFS6O75380 124 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms