RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ID3Q02535 119 aa13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 KIAA0141Q14154 515 aaPredicted RBP13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 C10orf55Q5SWW7 151 aa13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 ZNF491Q8N8L2 437 aa13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 C4orf3Q8WVX3 66 aa13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 CXorf58Q96LI9 332 aa13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 CIB3Q96Q77 187 aaPredicted RBP13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 FAM103A1Q9BTL3 118 aaKnown RBP13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 GPR61Q9BZJ8 451 aa13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 TNCP24821 2201 aa13.22□□□□□ -0.29
PRPF40A-204ENST00000450303 MFSD2BA6NFX1 497 aa13.21□□□□□ -0.29
PRPF40A-204ENST00000450303 KRBOX1C9JBD0 128 aa13.21□□□□□ -0.29
PRPF40A-204ENST00000450303 SYNGR2O43760 224 aa13.21□□□□□ -0.29
PRPF40A-204ENST00000450303 IGLV1-40P01703 118 aa13.21□□□□□ -0.29
PRPF40A-204ENST00000450303 EGR2P11161 476 aaPredicted RBP13.21□□□□□ -0.29
PRPF40A-204ENST00000450303 RAB9AP51151 201 aa13.21□□□□□ -0.29
PRPF40A-204ENST00000450303 UNQ5815/PRO19632Q6UWF5 114 aa13.21□□□□□ -0.29
PRPF40A-204ENST00000450303 OR11H1Q8NG94 326 aa13.21□□□□□ -0.29
PRPF40A-204ENST00000450303 MYOZ3Q8TDC0 251 aa13.21□□□□□ -0.29
PRPF40A-204ENST00000450303 SLC25A31Q9H0C2 315 aa13.21□□□□□ -0.29
PRPF40A-204ENST00000450303 RBKSQ9H477 322 aa13.21□□□□□ -0.29
PRPF40A-204ENST00000450303 RCL1Q9Y2P8 373 aaKnown RBP13.21□□□□□ -0.29
PRPF40A-204ENST00000450303 CYB5BO43169 146 aa13.2□□□□□ -0.3
PRPF40A-204ENST00000450303 SOX15O60248 233 aa13.2□□□□□ -0.3
PRPF40A-204ENST00000450303 CRIP2P52943 208 aaPredicted RBP13.2□□□□□ -0.3
PRPF40A-204ENST00000450303 RPP30P78346 268 aaKnown RBP13.2□□□□□ -0.3
PRPF40A-204ENST00000450303 SSBP2P81877 361 aaPredicted RBP13.2□□□□□ -0.3
PRPF40A-204ENST00000450303 AKIRIN2Q53H80 203 aa13.2□□□□□ -0.3
PRPF40A-204ENST00000450303 EIF4E3Q8N5X7 224 aaKnown RBP13.2□□□□□ -0.3
PRPF40A-204ENST00000450303 LFNGQ8NES3 379 aa13.2□□□□□ -0.3
PRPF40A-204ENST00000450303 DTD1Q8TEA8 209 aa13.2□□□□□ -0.3
PRPF40A-204ENST00000450303 UBE2E2Q96LR5 201 aa13.2□□□□□ -0.3
PRPF40A-204ENST00000450303 HEYLQ9NQ87 328 aaPredicted RBP13.2□□□□□ -0.3
PRPF40A-204ENST00000450303 CYTL1Q9NRR1 136 aa13.2□□□□□ -0.3
PRPF40A-204ENST00000450303 E7EUB6 86 aa13.19□□□□□ -0.3
PRPF40A-204ENST00000450303 INS-IGF2F8WCM5 200 aa13.19□□□□□ -0.3
PRPF40A-204ENST00000450303 ZP3P21754 424 aa13.19□□□□□ -0.3
PRPF40A-204ENST00000450303 SNCAP37840 140 aa13.19□□□□□ -0.3
PRPF40A-204ENST00000450303 SUB1P53999 127 aaKnown RBP eCLIP13.19□□□□□ -0.3
PRPF40A-204ENST00000450303 C19orf54Q5BKX5 351 aa13.19□□□□□ -0.3
PRPF40A-204ENST00000450303 SPINK9Q5DT21 86 aa13.19□□□□□ -0.3
PRPF40A-204ENST00000450303 FAM74A1Q5RGS3 127 aa13.19□□□□□ -0.3
PRPF40A-204ENST00000450303 OR1N2Q8NGR9 330 aa13.19□□□□□ -0.3
PRPF40A-204ENST00000450303 RAB40CQ96S21 281 aa13.19□□□□□ -0.3
PRPF40A-204ENST00000450303 MAGT1Q9H0U3 335 aa13.19□□□□□ -0.3
PRPF40A-204ENST00000450303 FBXL17Q9UF56 701 aa13.19□□□□□ -0.3
PRPF40A-204ENST00000450303 CGB1A6NKQ9 187 aa13.18□□□□□ -0.3
PRPF40A-204ENST00000450303 TEX22C9J3V5 150 aa13.18□□□□□ -0.3
PRPF40A-204ENST00000450303 TEX46H3BTG2 121 aa13.18□□□□□ -0.3
PRPF40A-204ENST00000450303 OR13C7P0DN81 318 aa13.18□□□□□ -0.3
PRPF40A-204ENST00000450303 POLR2GP62487 172 aaKnown RBP eCLIP13.18□□□□□ -0.3
PRPF40A-204ENST00000450303 BLOC1S1P78537 153 aa13.18□□□□□ -0.3
PRPF40A-204ENST00000450303 OR10W1Q8NGF6 305 aa13.18□□□□□ -0.3
PRPF40A-204ENST00000450303 OR1L6Q8NGR2 347 aa13.18□□□□□ -0.3
PRPF40A-204ENST00000450303 SAT2Q96F10 170 aaPredicted RBP13.18□□□□□ -0.3
PRPF40A-204ENST00000450303 MS4A10Q96PG2 267 aa13.18□□□□□ -0.3
PRPF40A-204ENST00000450303 NPIPB5A8MRT5 1133 aa13.17□□□□□ -0.3
PRPF40A-204ENST00000450303 SEC14L6B5MCN3 397 aa13.17□□□□□ -0.3
PRPF40A-204ENST00000450303 SSSCA1O60232 199 aa13.17□□□□□ -0.3
PRPF40A-204ENST00000450303 ATP5IP56385 69 aaPredicted RBP13.17□□□□□ -0.3
PRPF40A-204ENST00000450303 FHL3Q13643 280 aa13.17□□□□□ -0.3
PRPF40A-204ENST00000450303 ASPHD1Q5U4P2 390 aa13.17□□□□□ -0.3
PRPF40A-204ENST00000450303 UQCC3Q6UW78 93 aa13.17□□□□□ -0.3
PRPF40A-204ENST00000450303 TTC9CQ8N5M4 171 aa13.17□□□□□ -0.3
PRPF40A-204ENST00000450303 OR2C3Q8N628 320 aa13.17□□□□□ -0.3
PRPF40A-204ENST00000450303 TMED6Q8WW62 240 aa13.17□□□□□ -0.3
PRPF40A-204ENST00000450303 A0A1B0GW64 132 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 IGLC7A0M8Q6 106 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 RAB19A4D1S5 217 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 APELAP0DMC3 54 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 IAPPP10997 89 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 DEFA4P12838 97 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 TAS2R30P59541 319 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 WT1-ASQ06250 92 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 ZNF616Q08AN1 781 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 C9orf66Q5T8R8 295 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 RPL7L1Q6DKI1 246 aaKnown RBP13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 UBAC2Q8NBM4 344 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 MARC2Q969Z3 335 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 SMIM8Q96KF7 97 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 PSENENQ9NZ42 101 aa13.16□□□□□ -0.3
PRPF40A-204ENST00000450303 ZNF705EA8MWA4 302 aaPredicted RBP13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 IFNA10P01566 189 aa13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 IGHV3-11P01762 117 aa13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 CRYGCP07315 174 aa13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 AREGP15514 252 aa13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 HIST1H1BP16401 226 aaKnown RBP13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 CTRB1P17538 263 aa13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 RUNX1Q01196 453 aa13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 ZNF266Q14584 549 aa13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 CTRB2Q6GPI1 263 aa13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 SLC24A4Q8NFF2 622 aa13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 OR5T1Q8NG75 326 aa13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 PRR25Q96S07 402 aa13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 ZNF355PQ9NSJ1 428 aa13.15□□□□□ -0.3
PRPF40A-204ENST00000450303 H3BUA1 57 aa13.14□□□□□ -0.31
PRPF40A-204ENST00000450303 REG1AP05451 166 aa13.14□□□□□ -0.31
PRPF40A-204ENST00000450303 OR8U8P0C7N1 319 aa13.14□□□□□ -0.31
PRPF40A-204ENST00000450303 CAV2P51636 162 aa13.14□□□□□ -0.31
PRPF40A-204ENST00000450303 SLURP1P55000 103 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms