RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 ZNF883P0CG24 379 aa11.65□□□□□ -0.54
ITGB4-202ENST00000449880 LY6EQ16553 131 aa11.65□□□□□ -0.54
ITGB4-202ENST00000449880 EPDR1Q9UM22 224 aa11.65□□□□□ -0.54
ITGB4-202ENST00000449880 VKORC1L1Q8N0U8 176 aa11.65□□□□□ -0.54
ITGB4-202ENST00000449880 C18orf15Q96N68 181 aa11.65□□□□□ -0.54
ITGB4-202ENST00000449880 CHCHD2Q9Y6H1 151 aaPredicted RBP11.65□□□□□ -0.54
ITGB4-202ENST00000449880 IGKV1-9A0A0C4DH69 117 aa11.65□□□□□ -0.54
ITGB4-202ENST00000449880 MMP23AO75900 390 aa11.65□□□□□ -0.54
ITGB4-202ENST00000449880 APOBEC3AP31941 199 aaPredicted RBP11.65□□□□□ -0.54
ITGB4-202ENST00000449880 SNRPD3P62318 126 aaKnown RBP11.65□□□□□ -0.54
ITGB4-202ENST00000449880 UNC13CQ8NB66 2214 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 IGKCP01834 107 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 PPP1R32Q7Z5V6 425 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 MESP1Q9BRJ9 268 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 TRAV8-4A0A0B4J246 113 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 IGKV1D-13A0A0B4J2D9 117 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 IGKV1-13P0DP09 117 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 LEPP41159 167 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 Q6ZT83 130 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 IGKV3D-15A0A087WSY6 115 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 CGB1A6NKQ9 187 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 H7C1H1 209 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 IGKV3-15P01624 115 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 EFNB3Q15768 340 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 ZNF585BQ52M93 769 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 NMSQ5H8A3 153 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 WDR82Q6UXN9 313 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 ZNF497Q6ZNH5 498 aa11.64□□□□□ -0.55
ITGB4-202ENST00000449880 PAX2Q02962 417 aa11.63□□□□□ -0.55
ITGB4-202ENST00000449880 TIMP4Q99727 224 aa11.63□□□□□ -0.55
ITGB4-202ENST00000449880 VSIRQ9H7M9 311 aa11.63□□□□□ -0.55
ITGB4-202ENST00000449880 GEMIN7Q9H840 131 aaKnown RBP11.63□□□□□ -0.55
ITGB4-202ENST00000449880 YPEL1O60688 119 aa11.63□□□□□ -0.55
ITGB4-202ENST00000449880 MOSP00540 346 aa11.63□□□□□ -0.55
ITGB4-202ENST00000449880 GLRXP35754 106 aa11.63□□□□□ -0.55
ITGB4-202ENST00000449880 TMEM170BQ5T4T1 132 aa11.63□□□□□ -0.55
ITGB4-202ENST00000449880 YPEL2Q96QA6 119 aa11.63□□□□□ -0.55
ITGB4-202ENST00000449880 POLR3KQ9Y2Y1 108 aaPredicted RBP11.63□□□□□ -0.55
ITGB4-202ENST00000449880 RPL39P5Q59GN2 51 aa11.63□□□□□ -0.55
ITGB4-202ENST00000449880 DPH3Q96FX2 82 aa11.63□□□□□ -0.55
ITGB4-202ENST00000449880 IGLV3-32A0A0A0MS00 114 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 FAM90A2PQ658T7 463 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 SLC25A48Q6ZT89 311 aaKnown RBP11.62□□□□□ -0.55
ITGB4-202ENST00000449880 LYZL4Q96KX0 146 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 MRPS18CQ9Y3D5 142 aaKnown RBP11.62□□□□□ -0.55
ITGB4-202ENST00000449880 IGLV3-12A0A075B6K2 115 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 C3orf79P0CE67 100 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 ASIPP42127 132 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 ATP1A1-AS1Q5TC04 95 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 YAE1D1Q9NRH1 226 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 MYLKQ15746 1914 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 SVILO95425 2214 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 UPK2O00526 184 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 CACNG7P62955 275 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 FRMPD3Q5JV73 1810 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 PLAURQ03405 335 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 TPTE2P1Q5T6R2 138 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 IFI27L1Q96BM0 104 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 SNHG12Q9BXW3 62 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 TMEM14EPQ6UXP3 125 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 FDCSPQ8NFU4 85 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 NEU4Q8WWR8 484 aaPredicted RBP11.62□□□□□ -0.55
ITGB4-202ENST00000449880 KLK15Q9H2R5 256 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 BEX4Q9NWD9 120 aaPredicted RBP11.62□□□□□ -0.55
ITGB4-202ENST00000449880 SCN2AQ99250 2005 aa11.62□□□□□ -0.55
ITGB4-202ENST00000449880 H3BRM9 83 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 SRSF1Q07955 248 aaKnown RBP eCLIP11.61□□□□□ -0.55
ITGB4-202ENST00000449880 ORMDL2Q53FV1 153 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 Q6ZS49 121 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 TMEM256Q8N2U0 113 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 GAGE2BQ13066 116 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 GAGE2EQ4V326 116 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 MEIG1Q5JSS6 88 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 GAGE2DQ9UEU5 116 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 TCRBV4S1A1TA0A5B7 111 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 GCSAMLQ5JQS6 135 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 MRPL14Q6P1L8 145 aaKnown RBP11.61□□□□□ -0.55
ITGB4-202ENST00000449880 ASCL2Q99929 193 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 A0A1B0GWJ7 208 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 GAGE12BA1L429 117 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 OCIAD2Q56VL3 154 aa11.61□□□□□ -0.55
ITGB4-202ENST00000449880 TRAV24A0A0B4J272 114 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 PVRIGQ6DKI7 326 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 C1orf162Q8NEQ5 155 aaPredicted RBP11.6□□□□□ -0.55
ITGB4-202ENST00000449880 LINC01560Q8TB33 94 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 KBTBD11-OT1A0A1B0GTJ5 212 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 IQCF6A8MYZ5 107 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 TDGF1P13385 188 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 QRFPP83859 136 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 COQ2Q96H96 371 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 TANC1Q9C0D5 1861 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 RPRMLQ8N4K4 120 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 FOXI3A8MTJ6 420 aaPredicted RBP11.6□□□□□ -0.55
ITGB4-202ENST00000449880 ZNHIT1O43257 154 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 RHOGP84095 191 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 OR10W1Q8NGF6 305 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 SPANXDQ9BXN6 97 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 IGKV1D-8A0A087WSZ0 117 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 A0A0G2JMM0 328 aa11.6□□□□□ -0.55
ITGB4-202ENST00000449880 A0A1W2PPB8 328 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms