RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 FDCSPQ8NFU4 85 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 COQ2Q96H96 371 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 ST20Q9HBF5 79 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 MRPS18CQ9Y3D5 142 aaKnown RBP6.5□□□□□ -1.37
NEDD9-204ENST00000448183 SCN8AQ9UQD0 1980 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 WNK2Q9Y3S1 2297 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 PDLIM4P50479 330 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 ATP5J2P56134 94 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 NUTF2P61970 127 aaKnown RBP6.5□□□□□ -1.37
NEDD9-204ENST00000448183 FAM27E3Q08E93 113 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 ZNF585BQ52M93 769 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 PVRIGQ6DKI7 326 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 CHCHD1Q96BP2 118 aaKnown RBP6.5□□□□□ -1.37
NEDD9-204ENST00000448183 VKORC1Q9BQB6 163 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 CYTL1Q9NRR1 136 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 ZNF319Q9P2F9 582 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 CACNA1GO43497 2377 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 A0A0A6YYD4 124 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 A0A1B0GW64 132 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 TCRBV4S1A1TA0A5B7 111 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 CEACAM1P13688 526 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 PAX1P15863 534 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 GFI1BQ5VTD9 330 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 CENPVQ7Z7K6 275 aaPredicted RBP6.5□□□□□ -1.37
NEDD9-204ENST00000448183 OR5AN1Q8NGI8 311 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 TSKUQ8WUA8 353 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 DEPPQ9NTK1 212 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 ROS1P08922 2347 aa6.5□□□□□ -1.37
NEDD9-204ENST00000448183 FREM3P0C091 2139 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 DIDO1Q9BTC0 2240 aaKnown RBP6.49□□□□□ -1.37
NEDD9-204ENST00000448183 RAMP3O60896 148 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 PYYP10082 97 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 CACNG7P62955 275 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 MORN2Q502X0 79 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 SLC50A1Q9BRV3 221 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 IGHV3OR16-8A0A075B7F1 116 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 FAM90A9PA6NNJ1 464 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 IGHV1-2P23083 117 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 TIMP3P35625 211 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 PRCDQ00LT1 54 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 ATP5L2Q7Z4Y8 100 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 VSIRQ9H7M9 311 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 PSG8Q9UQ74 426 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 IGLV3-12A0A075B6K2 115 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 A0A0G2JMM0 328 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 TRBV7-9A0A0J9YWB2 115 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 A0A1W2PPB8 328 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 KIR3DP1A8MWS1 328 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 TMEM262E9PQX1 116 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 COX6B1P14854 86 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 TMPRSS3P57727 454 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 FOXL1Q12952 345 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 FAM71F2Q6NXP2 309 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 NUP37Q8NFH4 326 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 IFI27L1Q96BM0 104 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 RNF125Q96EQ8 232 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 REG4Q9BYZ8 158 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 CNTFRP26992 372 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 DUTP33316 252 aaKnown RBP6.49□□□□□ -1.37
NEDD9-204ENST00000448183 SUPT4H1P63272 117 aaKnown RBP6.49□□□□□ -1.37
NEDD9-204ENST00000448183 HSD52Q0P140 79 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 TMEM95Q3KNT9 176 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 MRPL14Q6P1L8 145 aaKnown RBP6.49□□□□□ -1.37
NEDD9-204ENST00000448183 DMRTA2Q96SC8 542 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 MS4A6AQ9H2W1 248 aa6.49□□□□□ -1.37
NEDD9-204ENST00000448183 IGHV3OR16-10A0A075B7F0 116 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 IGLV3-32A0A0A0MS00 114 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 C17orf100A8MU93 164 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 CELA3BP08861 270 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 CCL3L1P16619 93 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 SRSF1Q07955 248 aaKnown RBP eCLIP6.48□□□□□ -1.37
NEDD9-204ENST00000448183 C1orf194Q5T5A4 169 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 CLEC19AQ6UXS0 136 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 SIGMAR1Q99720 223 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 Q5PR19 223 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 SFTA2Q6UW10 78 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 LINC01560Q8TB33 94 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 ZNF479Q96JC4 524 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 TOMM7Q9P0U1 55 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 CYSLTR1Q9Y271 337 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 COL4A5P29400 1685 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 EPOPA6NHQ4 379 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 NBR2O15453 112 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 ORMDL2Q53FV1 153 aa6.48□□□□□ -1.37
NEDD9-204ENST00000448183 PRR19A6NJB7 356 aa6.47□□□□□ -1.37
NEDD9-204ENST00000448183 OR9G9P0C7N8 305 aa6.47□□□□□ -1.37
NEDD9-204ENST00000448183 IFI27P40305 119 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-204ENST00000448183 NEU4Q8WWR8 484 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-204ENST00000448183 DUX3Q96PT4 197 aa6.47□□□□□ -1.37
NEDD9-204ENST00000448183 SLC25A2Q9BXI2 301 aa6.47□□□□□ -1.37
NEDD9-204ENST00000448183 DOCK3Q8IZD9 2030 aa6.47□□□□□ -1.37
NEDD9-204ENST00000448183 CADP27708 2225 aa6.47□□□□□ -1.37
NEDD9-204ENST00000448183 DLEU1O43261 78 aa6.47□□□□□ -1.37
NEDD9-204ENST00000448183 HOXA3O43365 443 aaPredicted RBP6.47□□□□□ -1.37
NEDD9-204ENST00000448183 IGLV3-19P01714 112 aa6.47□□□□□ -1.37
NEDD9-204ENST00000448183 RNASE4P34096 147 aaKnown RBP6.47□□□□□ -1.37
NEDD9-204ENST00000448183 SRSF7Q16629 238 aaKnown RBP eCLIP6.47□□□□□ -1.37
NEDD9-204ENST00000448183 TREML4Q6UXN2 200 aa6.47□□□□□ -1.37
NEDD9-204ENST00000448183 LINC01551Q86U37 167 aa6.47□□□□□ -1.37
NEDD9-204ENST00000448183 OR9G4Q8NGQ1 327 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms