RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 SLC22A1O15245 554 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 DBIP07108 87 aaKnown RBP2.27□□□□□ -2.05
PMS1-216ENST00000447734 BPGMP07738 259 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 UCHL1P09936 223 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 GPX2P18283 190 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 RPS3P23396 243 aaKnown RBP eCLIP2.27□□□□□ -2.05
PMS1-216ENST00000447734 COL8A2P25067 703 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 S100A11P31949 105 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 RPL28P46779 137 aaKnown RBP2.27□□□□□ -2.05
PMS1-216ENST00000447734 INSL3P51460 131 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 BRMS1LQ5PSV4 323 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 AMMECR1LQ6DCA0 310 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 IFT20Q8IY31 132 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 HIST3H2BBQ8N257 126 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 C1orf64Q8NEQ6 169 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 OR51T1Q8NGJ9 327 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 PPTC7Q8NI37 304 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 WFDC5Q8TCV5 224 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 DCANP1Q8TF63 244 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 CANT1Q8WVQ1 401 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 TEX37Q96LM6 180 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 CARD19Q96LW7 228 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 PFDN5Q99471 154 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 YIPF3Q9GZM5 350 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 TMEM133Q9H2Q1 129 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 MED31Q9Y3C7 131 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 LTBP4Q8N2S1 1624 aa2.27□□□□□ -2.05
PMS1-216ENST00000447734 ARAP1Q96P48 1450 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 TECPR2O15040 1411 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 TRPM3Q9HCF6 1732 aaPredicted RBP2.26□□□□□ -2.05
PMS1-216ENST00000447734 ATRXP46100 2492 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 A0A0D9SEW6 157 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 A0A1B0GX51 115 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 TRDV1A0A1B0GX56 115 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 TMEM189A5PLL7 270 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 TMEM212A6NML5 194 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 C19orf84I3L1E1 186 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 SYNGR2O43760 224 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 OR2T1O43869 369 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 GGCTO75223 188 aaKnown RBP2.26□□□□□ -2.05
PMS1-216ENST00000447734 MSMBP08118 114 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 DNAH10OSP0CZ25 163 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 ZNF728P0DKX0 622 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 PSMB8P28062 276 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 EVX1P49640 407 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 EIF2B2P49770 351 aaKnown RBP2.26□□□□□ -2.05
PMS1-216ENST00000447734 UBE2BP63146 152 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 PLCXD2Q0VAA5 305 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 EIF4EBP1Q13541 118 aaPredicted RBP2.26□□□□□ -2.05
PMS1-216ENST00000447734 EBI3Q14213 229 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 DNLZQ5SXM8 178 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 HRCT1Q6UXD1 115 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 MSRB3Q8IXL7 192 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 RPP25LQ8N5L8 163 aaKnown RBP2.26□□□□□ -2.05
PMS1-216ENST00000447734 TMEM229BQ8NBD8 167 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 OR5A1Q8NGJ0 315 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 YPEL2Q96QA6 119 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 SLC25A21Q9BQT8 299 aaPredicted RBP2.26□□□□□ -2.05
PMS1-216ENST00000447734 HIGD2AQ9BW72 106 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 TIMM9Q9Y5J7 89 aa2.26□□□□□ -2.05
PMS1-216ENST00000447734 BCL9O00512 1426 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 SPATA31E1Q6ZUB1 1445 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 MYH11P35749 1972 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 LCTP09848 1927 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 CACNA1SQ13698 1873 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 PEG3Q9GZU2 1588 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 TRGV5A0A0B4J1U4 118 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 IGKV1-9A0A0C4DH69 117 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 C11orf86A6NJI1 115 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 A8MU10 97 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 H7BYZ3 331 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 GNRH2O43555 120 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 PSCAO43653 123 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 NDUFA2O43678 99 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 IGKV1-16P04430 117 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 COX4I1P13073 169 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 LGALS3P17931 250 aaKnown RBP2.25□□□□□ -2.05
PMS1-216ENST00000447734 EIF3IQ13347 325 aaKnown RBP2.25□□□□□ -2.05
PMS1-216ENST00000447734 C1orf140Q5VVS0 124 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 HMGN2P46Q86SG4 172 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 PRR15Q8IV56 129 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 RNF182Q8N6D2 247 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 OR8J3Q8NGG0 315 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 OR4C16Q8NGL9 310 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 TMEM106AQ96A25 262 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 HIST1H2BLQ99880 126 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 CACYBPQ9HB71 228 aaKnown RBP2.25□□□□□ -2.05
PMS1-216ENST00000447734 COPZ2Q9P299 210 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 HSPB8Q9UJY1 196 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 FAM215AQ9Y5M1 114 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 R4GN34 69 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 MINOS1-NBL1R4GNA1 71 aa2.25□□□□□ -2.05
PMS1-216ENST00000447734 REREQ9P2R6 1566 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 SLIT3O75094 1523 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 IGLV2-18A0A075B6J9 118 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 IGKV2-28A0A075B6P5 120 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 GABARAPH6UMI1 98 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 TMEM256-PLSCR3K7ERE1 68 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 OVOL1O14753 267 aa2.24□□□□□ -2.05
PMS1-216ENST00000447734 LYZL6O75951 148 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms