RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 PPDPFLQ8WWR9 84 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 TMEM158Q8WZ71 300 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 DDB2Q92466 427 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 H1FXQ92522 213 aaKnown RBP2.14□□□□□ -2.07
UBBP3-201ENST00000445497 TAF15Q92804 592 aaKnown RBP eCLIP2.14□□□□□ -2.07
UBBP3-201ENST00000445497 PRELID3AQ96N28 172 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 C18orf15Q96N68 181 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 HDHD3Q9BSH5 251 aaPredicted RBP2.14□□□□□ -2.07
UBBP3-201ENST00000445497 RNF126Q9BV68 326 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 SLC25A2Q9BXI2 301 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 ZNF702PQ9H963 129 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 ZNF286AQ9HBT8 521 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 NDUFB11Q9NX14 153 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 C11orf21Q9P2W6 132 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 DPM3Q9P2X0 92 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 DKK2Q9UBU2 259 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 ZNF222Q9UK12 451 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 SPCS1Q9Y6A9 102 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 FRMPD3Q5JV73 1810 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 PXDNLA1KZ92 1463 aa2.14□□□□□ -2.07
UBBP3-201ENST00000445497 EVPLQ92817 2033 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 PREX2Q70Z35 1606 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 ADAMTSL3P82987 1691 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 IGLV5-37A0A075B6J1 123 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.13□□□□□ -2.07
UBBP3-201ENST00000445497 A0A0J9YW62 118 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 KLF18A0A0U1RQI7 1052 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 LOC107986453A0A1B0GWG9 222 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 A0A1W2PP18 115 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 A0A1W2PPM0 123 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 KRTAP23-1A1A580 65 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 TMEM235A6NFC5 223 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 EPOPA6NHQ4 379 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 ZNF73O43830 326 aaPredicted RBP2.13□□□□□ -2.07
UBBP3-201ENST00000445497 PPP1R3DO95685 299 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 HLA-DQA1P01909 254 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 CD7P09564 240 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 SFTA3P0C7M3 94 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 FRMD6-AS1P0C7T7 363 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 ZNF286BP0CG31 522 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 COX6A1P12074 109 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 ADCYAP1P18509 176 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 IGHV1-2P23083 117 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 ZNF138P52744 262 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 KRTDAPP60985 99 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 TWIST1Q15672 202 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 UBE2SQ16763 222 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 SPATA45Q537H7 98 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 SPRNQ5BIV9 151 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 BVES-AS1Q5T3Y7 98 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 ZNF660Q6AZW8 331 aaPredicted RBP2.13□□□□□ -2.07
UBBP3-201ENST00000445497 EBLN2Q6P2I7 272 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 TREML4Q6UXN2 200 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 RFLNAQ6ZTI6 216 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 METTL27Q8N6F8 245 aaPredicted RBP2.13□□□□□ -2.07
UBBP3-201ENST00000445497 SIGLECL1Q8N7X8 197 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 OR8A1Q8NGG7 326 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 OR5C1Q8NGR4 320 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 MPLKIPQ8TAP9 179 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 MYOZ3Q8TDC0 251 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 MUCL1Q96DR8 90 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 VSIG2Q96IQ7 327 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 PGLYRP2Q96PD5 576 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 TIMM17AQ99595 171 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 VGLL1Q99990 258 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 SHANK2-AS3Q9BTD1 123 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 TMEM243Q9BU79 118 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 CHAC1Q9BUX1 264 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 ZNF747Q9BV97 191 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 SLC35B3Q9H1N7 401 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 LINC00597Q9H2U6 94 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 TAC3Q9UHF0 121 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 ATRNO75882 1429 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 PLEKHH2Q8IVE3 1493 aa2.13□□□□□ -2.07
UBBP3-201ENST00000445497 MYH10P35580 1976 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 ZC3H13Q5T200 1668 aaKnown RBP2.12□□□□□ -2.07
UBBP3-201ENST00000445497 ARHGAP5Q13017 1502 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 URB2Q14146 1524 aaKnown RBP2.12□□□□□ -2.07
UBBP3-201ENST00000445497 HECW2Q9P2P5 1572 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 IGHV1-45A0A0A0MS14 117 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 TRAV19A0A0A6YYK7 116 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 TRGV8A0A0C4DH27 118 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 TRBV7-7A0A0K0K1E9 115 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 A0A1B0GTL3 188 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 ZNF860A6NHJ4 632 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 OOSP1A8MZH6 123 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 C17orf112F2Z3M2 114 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 TMEM256-PLSCR3K7ERE1 68 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 ATOX1O00244 68 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 ETV2O00321 342 aaPredicted RBP2.12□□□□□ -2.07
UBBP3-201ENST00000445497 PEX7O00628 323 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 GNGT2O14610 69 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 SIX6O95475 246 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 LTAP01374 205 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 HBDP02042 147 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 CD3DP04234 171 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 PRM2P04554 102 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 ZNF688P0C7X2 276 aa2.12□□□□□ -2.07
UBBP3-201ENST00000445497 HOXB6P17509 224 aaKnown RBP2.12□□□□□ -2.07
UBBP3-201ENST00000445497 ELK1P19419 428 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms