RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 IGKV1-39P01597 117 aa14.75□□□□□ -0.05
TRIM39-210ENST00000440271 IGKV1D-39P04432 117 aa14.75□□□□□ -0.05
TRIM39-210ENST00000440271 PSMB9P28065 219 aa14.75□□□□□ -0.05
TRIM39-210ENST00000440271 PPP5CP53041 499 aa14.75□□□□□ -0.05
TRIM39-210ENST00000440271 PHLDA2Q53GA4 152 aa14.75□□□□□ -0.05
TRIM39-210ENST00000440271 SOHLH1Q5JUK2 328 aa14.75□□□□□ -0.05
TRIM39-210ENST00000440271 Q6ZRM9 215 aa14.75□□□□□ -0.05
TRIM39-210ENST00000440271 UBE2DNLQ8IWF7 75 aa14.75□□□□□ -0.05
TRIM39-210ENST00000440271 SPINK9Q5DT21 86 aa14.74□□□□□ -0.05
TRIM39-210ENST00000440271 OR5H2Q8NGV7 314 aa14.74□□□□□ -0.05
TRIM39-210ENST00000440271 OR6F1Q8NGZ6 308 aa14.74□□□□□ -0.05
TRIM39-210ENST00000440271 ANAPC10Q9UM13 185 aa14.74□□□□□ -0.05
TRIM39-210ENST00000440271 SNCAP37840 140 aa14.73□□□□□ -0.05
TRIM39-210ENST00000440271 DHRS2Q13268 280 aa14.73□□□□□ -0.05
TRIM39-210ENST00000440271 PSMG4Q5JS54 123 aa14.73□□□□□ -0.05
TRIM39-210ENST00000440271 TBC1D26Q86UD7 250 aa14.73□□□□□ -0.05
TRIM39-210ENST00000440271 NARS2Q96I59 477 aaKnown RBP14.73□□□□□ -0.05
TRIM39-210ENST00000440271 C1QTNF4Q9BXJ3 329 aa14.73□□□□□ -0.05
TRIM39-210ENST00000440271 RNF167Q9H6Y7 350 aa14.73□□□□□ -0.05
TRIM39-210ENST00000440271 XCL2Q9UBD3 114 aa14.73□□□□□ -0.05
TRIM39-210ENST00000440271 SPART-AS1P0CW21 52 aa14.72□□□□□ -0.05
TRIM39-210ENST00000440271 TAS2R46P59540 309 aa14.72□□□□□ -0.05
TRIM39-210ENST00000440271 NUTF2P61970 127 aaKnown RBP14.72□□□□□ -0.05
TRIM39-210ENST00000440271 KCTD21Q4G0X4 260 aa14.72□□□□□ -0.05
TRIM39-210ENST00000440271 TMEM230Q96A57 120 aa14.72□□□□□ -0.05
TRIM39-210ENST00000440271 MRGPRFQ96AM1 343 aa14.72□□□□□ -0.05
TRIM39-210ENST00000440271 MRPL36Q9P0J6 103 aaKnown RBP14.72□□□□□ -0.05
TRIM39-210ENST00000440271 CLN5O75503 358 aa14.71□□□□□ -0.05
TRIM39-210ENST00000440271 NAT1P18440 290 aa14.71□□□□□ -0.05
TRIM39-210ENST00000440271 S100GP29377 79 aa14.71□□□□□ -0.05
TRIM39-210ENST00000440271 IZUMO4Q1ZYL8 232 aa14.71□□□□□ -0.05
TRIM39-210ENST00000440271 C1orf134Q5TEV5 83 aa14.71□□□□□ -0.05
TRIM39-210ENST00000440271 SPARTQ8N0X7 666 aa14.71□□□□□ -0.05
TRIM39-210ENST00000440271 FAM210BQ96KR6 192 aa14.71□□□□□ -0.05
TRIM39-210ENST00000440271 HELTA6NFD8 242 aa14.7□□□□□ -0.06
TRIM39-210ENST00000440271 INS-IGF2F8WCM5 200 aa14.7□□□□□ -0.06
TRIM39-210ENST00000440271 EIF2B2P49770 351 aaKnown RBP14.7□□□□□ -0.06
TRIM39-210ENST00000440271 GABARAPL2P60520 117 aa14.7□□□□□ -0.06
TRIM39-210ENST00000440271 MLANAQ16655 118 aa14.7□□□□□ -0.06
TRIM39-210ENST00000440271 LPCAT3Q6P1A2 487 aa14.7□□□□□ -0.06
TRIM39-210ENST00000440271 LYSMD2Q8IV50 215 aa14.7□□□□□ -0.06
TRIM39-210ENST00000440271 OR4X1Q8NH49 305 aa14.7□□□□□ -0.06
TRIM39-210ENST00000440271 S100A16Q96FQ6 103 aaKnown RBP14.7□□□□□ -0.06
TRIM39-210ENST00000440271 FNDC4Q9H6D8 234 aaPredicted RBP14.7□□□□□ -0.06
TRIM39-210ENST00000440271 U3KQE9 123 aa14.7□□□□□ -0.06
TRIM39-210ENST00000440271 ANKRD65E5RJM6 399 aa14.69□□□□□ -0.06
TRIM39-210ENST00000440271 CORTO00230 105 aa14.69□□□□□ -0.06
TRIM39-210ENST00000440271 RNASE2P10153 161 aaKnown RBP14.69□□□□□ -0.06
TRIM39-210ENST00000440271 SUB1P53999 127 aaKnown RBP eCLIP14.69□□□□□ -0.06
TRIM39-210ENST00000440271 EMP1P54849 157 aa14.69□□□□□ -0.06
TRIM39-210ENST00000440271 RNF212Q495C1 297 aa14.69□□□□□ -0.06
TRIM39-210ENST00000440271 FCGR1BQ92637 280 aa14.69□□□□□ -0.06
TRIM39-210ENST00000440271 NEU1Q99519 415 aa14.69□□□□□ -0.06
TRIM39-210ENST00000440271 H3BMM0 161 aa14.68□□□□□ -0.06
TRIM39-210ENST00000440271 HRH1P35367 487 aa14.68□□□□□ -0.06
TRIM39-210ENST00000440271 AP2S1P53680 142 aaPredicted RBP14.68□□□□□ -0.06
TRIM39-210ENST00000440271 IZUMO2Q6UXV1 221 aa14.68□□□□□ -0.06
TRIM39-210ENST00000440271 ZNF705AQ6ZN79 300 aaPredicted RBP14.68□□□□□ -0.06
TRIM39-210ENST00000440271 SLC35G3Q8N808 338 aa14.68□□□□□ -0.06
TRIM39-210ENST00000440271 LOC100506127A0A0U1RQW1 187 aa14.67□□□□□ -0.06
TRIM39-210ENST00000440271 TMEM189A5PLL7 270 aa14.67□□□□□ -0.06
TRIM39-210ENST00000440271 SCGB2A1O75556 95 aa14.67□□□□□ -0.06
TRIM39-210ENST00000440271 CDK2AP2O75956 126 aa14.67□□□□□ -0.06
TRIM39-210ENST00000440271 IGKV1-17P01599 117 aa14.67□□□□□ -0.06
TRIM39-210ENST00000440271 HLA-DMAP28067 261 aa14.67□□□□□ -0.06
TRIM39-210ENST00000440271 OPRK1P41145 380 aa14.67□□□□□ -0.06
TRIM39-210ENST00000440271 HSPA13P48723 471 aa14.67□□□□□ -0.06
TRIM39-210ENST00000440271 TSPAN5P62079 268 aa14.67□□□□□ -0.06
TRIM39-210ENST00000440271 TIGITQ495A1 244 aa14.67□□□□□ -0.06
TRIM39-210ENST00000440271 C16orf54Q6UWD8 224 aa14.67□□□□□ -0.06
TRIM39-210ENST00000440271 MAPKAPK5-AS1Q8N8E1 139 aa14.67□□□□□ -0.06
TRIM39-210ENST00000440271 GLMPQ8WWB7 406 aa14.67□□□□□ -0.06
TRIM39-210ENST00000440271 A0A0B4J293 547 aa14.66□□□□□ -0.06
TRIM39-210ENST00000440271 ZNF705FA8MVS1 300 aaPredicted RBP14.66□□□□□ -0.06
TRIM39-210ENST00000440271 C16orf90A8MZG2 172 aa14.66□□□□□ -0.06
TRIM39-210ENST00000440271 ZNF705DP0CH99 300 aaPredicted RBP14.66□□□□□ -0.06
TRIM39-210ENST00000440271 ZNF705BP0CI00 300 aaPredicted RBP14.66□□□□□ -0.06
TRIM39-210ENST00000440271 ETV6P41212 452 aa14.66□□□□□ -0.06
TRIM39-210ENST00000440271 TAS2R20P59543 309 aa14.66□□□□□ -0.06
TRIM39-210ENST00000440271 SNRPD3P62318 126 aaKnown RBP14.66□□□□□ -0.06
TRIM39-210ENST00000440271 TMEM69Q5SWH9 247 aa14.66□□□□□ -0.06
TRIM39-210ENST00000440271 TRAV30A0A087WSZ9 112 aa14.65□□□□□ -0.06
TRIM39-210ENST00000440271 SMIM9A6NGZ8 99 aa14.65□□□□□ -0.06
TRIM39-210ENST00000440271 FAM90A26D6RGX4 464 aa14.65□□□□□ -0.06
TRIM39-210ENST00000440271 TMEM127O75204 238 aa14.65□□□□□ -0.06
TRIM39-210ENST00000440271 IGKV1-5P01602 117 aa14.65□□□□□ -0.06
TRIM39-210ENST00000440271 RPL5P46777 297 aaKnown RBP14.65□□□□□ -0.06
TRIM39-210ENST00000440271 VCX3BQ9H321 246 aa14.65□□□□□ -0.06
TRIM39-210ENST00000440271 DKK2Q9UBU2 259 aa14.65□□□□□ -0.06
TRIM39-210ENST00000440271 HNRNPCP07910 306 aaKnown RBP eCLIP14.64□□□□□ -0.07
TRIM39-210ENST00000440271 PRSS3P35030 304 aa14.64□□□□□ -0.07
TRIM39-210ENST00000440271 UCP3P55916 312 aa14.64□□□□□ -0.07
TRIM39-210ENST00000440271 NIPSNAP3BQ9BS92 247 aa14.64□□□□□ -0.07
TRIM39-210ENST00000440271 SEPSECSQ9HD40 501 aaKnown RBP14.64□□□□□ -0.07
TRIM39-210ENST00000440271 IGHV3OR16-12A0A075B7B8 117 aa14.63□□□□□ -0.07
TRIM39-210ENST00000440271 P0C879 139 aa14.63□□□□□ -0.07
TRIM39-210ENST00000440271 HTN3P15516 51 aa14.63□□□□□ -0.07
TRIM39-210ENST00000440271 HOXA1P49639 335 aaPredicted RBP14.63□□□□□ -0.07
TRIM39-210ENST00000440271 TNP2Q05952 138 aa14.63□□□□□ -0.07
TRIM39-210ENST00000440271 UBE2NLQ5JXB2 153 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms