RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 DCANP1Q8TF63 244 aa10.57□□□□□ -0.72
HDAC8-213ENST00000436675 TMEM230Q96A57 120 aa10.57□□□□□ -0.72
HDAC8-213ENST00000436675 FXYD6Q9H0Q3 95 aa10.57□□□□□ -0.72
HDAC8-213ENST00000436675 MRPL36Q9P0J6 103 aaKnown RBP10.57□□□□□ -0.72
HDAC8-213ENST00000436675 APOBP04114 4563 aaKnown RBP10.56□□□□□ -0.72
HDAC8-213ENST00000436675 IGHV3OR16-12A0A075B7B8 117 aa10.56□□□□□ -0.72
HDAC8-213ENST00000436675 HELTA6NFD8 242 aa10.56□□□□□ -0.72
HDAC8-213ENST00000436675 GPR31O00270 319 aa10.56□□□□□ -0.72
HDAC8-213ENST00000436675 SPART-AS1P0CW21 52 aa10.56□□□□□ -0.72
HDAC8-213ENST00000436675 SDC2P34741 201 aa10.56□□□□□ -0.72
HDAC8-213ENST00000436675 CBX5P45973 191 aa10.56□□□□□ -0.72
HDAC8-213ENST00000436675 HSPE1P61604 102 aaKnown RBP10.56□□□□□ -0.72
HDAC8-213ENST00000436675 DHRS11Q6UWP2 260 aa10.56□□□□□ -0.72
HDAC8-213ENST00000436675 NRG4Q8WWG1 115 aa10.56□□□□□ -0.72
HDAC8-213ENST00000436675 SEC22AQ96IW7 307 aa10.56□□□□□ -0.72
HDAC8-213ENST00000436675 DIABLOQ9NR28 239 aa10.56□□□□□ -0.72
HDAC8-213ENST00000436675 CDK2AP2O75956 126 aa10.55□□□□□ -0.72
HDAC8-213ENST00000436675 IGKV1-39P01597 117 aa10.55□□□□□ -0.72
HDAC8-213ENST00000436675 IGKV1D-39P04432 117 aa10.55□□□□□ -0.72
HDAC8-213ENST00000436675 CRYBB3P26998 211 aa10.55□□□□□ -0.72
HDAC8-213ENST00000436675 PSMB9P28065 219 aa10.55□□□□□ -0.72
HDAC8-213ENST00000436675 FGF9P31371 208 aaPredicted RBP10.55□□□□□ -0.72
HDAC8-213ENST00000436675 SNCAP37840 140 aa10.55□□□□□ -0.72
HDAC8-213ENST00000436675 FXYD7P58549 80 aa10.55□□□□□ -0.72
HDAC8-213ENST00000436675 MLANAQ16655 118 aa10.55□□□□□ -0.72
HDAC8-213ENST00000436675 MRGPRFQ96AM1 343 aa10.55□□□□□ -0.72
HDAC8-213ENST00000436675 NARS2Q96I59 477 aaKnown RBP10.55□□□□□ -0.72
HDAC8-213ENST00000436675 C1QTNF4Q9BXJ3 329 aa10.55□□□□□ -0.72
HDAC8-213ENST00000436675 RNF167Q9H6Y7 350 aa10.55□□□□□ -0.72
HDAC8-213ENST00000436675 IGKV3-20P01619 116 aa10.54□□□□□ -0.72
HDAC8-213ENST00000436675 TIGITQ495A1 244 aa10.54□□□□□ -0.72
HDAC8-213ENST00000436675 TBC1D26Q86UD7 250 aa10.54□□□□□ -0.72
HDAC8-213ENST00000436675 OR5H2Q8NGV7 314 aa10.54□□□□□ -0.72
HDAC8-213ENST00000436675 CNBD2Q96M20 576 aa10.54□□□□□ -0.72
HDAC8-213ENST00000436675 SSR3Q9UNL2 185 aa10.54□□□□□ -0.72
HDAC8-213ENST00000436675 A0A0A6YYH2 397 aa10.53□□□□□ -0.72
HDAC8-213ENST00000436675 A6NJ64 397 aa10.53□□□□□ -0.72
HDAC8-213ENST00000436675 H3BMM0 161 aa10.53□□□□□ -0.72
HDAC8-213ENST00000436675 NUTF2P61970 127 aaKnown RBP10.53□□□□□ -0.72
HDAC8-213ENST00000436675 RNF212Q495C1 297 aa10.53□□□□□ -0.72
HDAC8-213ENST00000436675 CLN5O75503 358 aa10.52□□□□□ -0.73
HDAC8-213ENST00000436675 OPRK1P41145 380 aa10.52□□□□□ -0.73
HDAC8-213ENST00000436675 EIF2B2P49770 351 aaKnown RBP10.52□□□□□ -0.73
HDAC8-213ENST00000436675 DEFB1P60022 68 aa10.52□□□□□ -0.73
HDAC8-213ENST00000436675 FAM222AQ5U5X8 452 aa10.52□□□□□ -0.73
HDAC8-213ENST00000436675 SLC35G3Q8N808 338 aa10.52□□□□□ -0.73
HDAC8-213ENST00000436675 OR6F1Q8NGZ6 308 aa10.52□□□□□ -0.73
HDAC8-213ENST00000436675 FAM210BQ96KR6 192 aa10.52□□□□□ -0.73
HDAC8-213ENST00000436675 NIPSNAP3BQ9BS92 247 aa10.52□□□□□ -0.73
HDAC8-213ENST00000436675 FNDC4Q9H6D8 234 aaPredicted RBP10.52□□□□□ -0.73
HDAC8-213ENST00000436675 SCRT2Q9NQ03 307 aa10.52□□□□□ -0.73
HDAC8-213ENST00000436675 BLOC1S6Q9UL45 172 aa10.52□□□□□ -0.73
HDAC8-213ENST00000436675 DNAH5Q8TE73 4624 aa10.51□□□□□ -0.73
HDAC8-213ENST00000436675 FAM90A26D6RGX4 464 aa10.51□□□□□ -0.73
HDAC8-213ENST00000436675 ANKRD65E5RJM6 399 aa10.51□□□□□ -0.73
HDAC8-213ENST00000436675 RNASE2P10153 161 aaKnown RBP10.51□□□□□ -0.73
HDAC8-213ENST00000436675 HLA-DMAP28067 261 aa10.51□□□□□ -0.73
HDAC8-213ENST00000436675 TMEM88Q6PEY1 159 aa10.51□□□□□ -0.73
HDAC8-213ENST00000436675 C16orf54Q6UWD8 224 aa10.51□□□□□ -0.73
HDAC8-213ENST00000436675 ZNF705AQ6ZN79 300 aaPredicted RBP10.51□□□□□ -0.73
HDAC8-213ENST00000436675 Q8N1X5 172 aa10.51□□□□□ -0.73
HDAC8-213ENST00000436675 GLMPQ8WWB7 406 aa10.51□□□□□ -0.73
HDAC8-213ENST00000436675 DKK2Q9UBU2 259 aa10.51□□□□□ -0.73
HDAC8-213ENST00000436675 TMEM189A5PLL7 270 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 ZNF705FA8MVS1 300 aaPredicted RBP10.5□□□□□ -0.73
HDAC8-213ENST00000436675 IGKV1-17P01599 117 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 ZNF705DP0CH99 300 aaPredicted RBP10.5□□□□□ -0.73
HDAC8-213ENST00000436675 ZNF705BP0CI00 300 aaPredicted RBP10.5□□□□□ -0.73
HDAC8-213ENST00000436675 S100GP29377 79 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 HRH1P35367 487 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 ETV6P41212 452 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 HOXA1P49639 335 aaPredicted RBP10.5□□□□□ -0.73
HDAC8-213ENST00000436675 SUB1P53999 127 aaKnown RBP eCLIP10.5□□□□□ -0.73
HDAC8-213ENST00000436675 SCAND1P57086 179 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 TAS2R46P59540 309 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 SNRPD3P62318 126 aaKnown RBP10.5□□□□□ -0.73
HDAC8-213ENST00000436675 KCTD21Q4G0X4 260 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 GDF5OSQ5U4N7 250 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 OR4X1Q8NH49 305 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 NEU1Q99519 415 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 TMED3Q9Y3Q3 217 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 RFNGQ9Y644 331 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 U3KQE9 123 aa10.5□□□□□ -0.73
HDAC8-213ENST00000436675 LOC100506127A0A0U1RQW1 187 aa10.49□□□□□ -0.73
HDAC8-213ENST00000436675 HNRNPCP07910 306 aaKnown RBP eCLIP10.49□□□□□ -0.73
HDAC8-213ENST00000436675 TSPAN5P62079 268 aa10.49□□□□□ -0.73
HDAC8-213ENST00000436675 ATG101Q9BSB4 218 aa10.49□□□□□ -0.73
HDAC8-213ENST00000436675 ANAPC10Q9UM13 185 aa10.49□□□□□ -0.73
HDAC8-213ENST00000436675 DMBT1Q9UGM3 2413 aaPredicted RBP10.49□□□□□ -0.73
HDAC8-213ENST00000436675 A0A0B4J293 547 aa10.48□□□□□ -0.73
HDAC8-213ENST00000436675 SMIM9A6NGZ8 99 aa10.48□□□□□ -0.73
HDAC8-213ENST00000436675 CORTO00230 105 aa10.48□□□□□ -0.73
HDAC8-213ENST00000436675 SCGB2A1O75556 95 aa10.48□□□□□ -0.73
HDAC8-213ENST00000436675 IGKV1-5P01602 117 aa10.48□□□□□ -0.73
HDAC8-213ENST00000436675 HLA-DRB4P13762 266 aa10.48□□□□□ -0.73
HDAC8-213ENST00000436675 HSPA13P48723 471 aa10.48□□□□□ -0.73
HDAC8-213ENST00000436675 AP2S1P53680 142 aaPredicted RBP10.48□□□□□ -0.73
HDAC8-213ENST00000436675 TAS2R20P59543 309 aa10.48□□□□□ -0.73
HDAC8-213ENST00000436675 GSG1LQ6UXU4 331 aa10.48□□□□□ -0.73
HDAC8-213ENST00000436675 LYSMD2Q8IV50 215 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms