RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 C1QTNF6Q9BXI9 259 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 MRPL20Q9BYC9 149 aaKnown RBP1.72□□□□□ -2.13
CLK1-204ENST00000432425 CBLN4Q9NTU7 201 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 TMEM216Q9P0N5 145 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 TRMT112Q9UI30 125 aaKnown RBP1.72□□□□□ -2.13
CLK1-204ENST00000432425 LINC00527Q9UJ94 153 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 ADAMTS12P58397 1594 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 BAZ1AQ9NRL2 1556 aaPredicted RBP1.72□□□□□ -2.13
CLK1-204ENST00000432425 MYH4Q9Y623 1939 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 ADGRL2O95490 1459 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 NCAPD3P42695 1498 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 MYOM2P54296 1465 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 CCDC141Q6ZP82 1450 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 TEX14Q8IWB6 1497 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 DCCP43146 1447 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 MYOM3Q5VTT5 1437 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 SPATA31E1Q6ZUB1 1445 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 YEATS2Q9ULM3 1422 aa1.72□□□□□ -2.13
CLK1-204ENST00000432425 TICRRQ7Z2Z1 1910 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 TRBV19A0A075B6N1 114 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 TRAV8-1A0A0A6YYK1 113 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 TRAV41A0A0B4J266 112 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 TMEM269A0A1B0GVZ9 245 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 GGT3PA6NGU5 568 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 A8MUN3 132 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 GGTLC3B5MD39 225 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 K7EPK0 472 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 LST1O00453 97 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 UPK2O00526 184 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 LYZL6O75951 148 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 IFNA7P01567 189 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 PMP2P02689 132 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 APODP05090 189 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 CECR9P0C854 216 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 HLA-EP13747 358 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 PPIBP23284 216 aaKnown RBP1.71□□□□□ -2.14
CLK1-204ENST00000432425 ATP6V0CP27449 155 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 RPS11P62280 158 aaKnown RBP eCLIP1.71□□□□□ -2.14
CLK1-204ENST00000432425 GRB2P62993 217 aaKnown RBP1.71□□□□□ -2.14
CLK1-204ENST00000432425 TCEAL5Q5H9L2 206 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 MEIG1Q5JSS6 88 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 Q5W150 140 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 ZNF773Q6PK81 442 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 Q6Q795 121 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 C1orf174Q8IYL3 243 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 NUP35Q8NFH5 326 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 OR4S1Q8NGB4 309 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 DCANP1Q8TF63 244 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 BRK1Q8WUW1 75 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 MAGOHBQ96A72 148 aaKnown RBP1.71□□□□□ -2.14
CLK1-204ENST00000432425 KCNS1Q96KK3 526 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 LINC00052Q96N35 136 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 OR4C12Q96R67 309 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 SDF2Q99470 211 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 TM2D3Q9BRN9 247 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 GGTLC1Q9BX51 225 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 FBXL12Q9NXK8 326 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 COMMD3Q9UBI1 195 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 TP73-AS1Q9UF72 201 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 SIPA1L1O43166 1804 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 DOCK8Q8NF50 2099 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 MAST2Q6P0Q8 1798 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 TRPM6Q9BX84 2022 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 MYH8P13535 1937 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 MYO18AQ92614 2054 aaKnown RBP1.71□□□□□ -2.14
CLK1-204ENST00000432425 IGKV1D-43A0A0B4J1Z2 117 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 A0A0G2JMM0 328 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 A0A1W2PPB8 328 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 KIR3DP1A8MWS1 328 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 C9JQL5 133 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 FNDC10F2Z333 226 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 J3QRK9 145 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 M0R1X1 148 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 GSTZ1O43708 216 aaPredicted RBP1.71□□□□□ -2.14
CLK1-204ENST00000432425 FSTL3O95633 263 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 IGLV2-8P01709 118 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 HLA-DQB1P01920 261 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 CTSDP07339 412 aaPredicted RBP1.71□□□□□ -2.14
CLK1-204ENST00000432425 CD14P08571 375 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 SMIM10L2AP0DMW4 78 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 SMIM10L2BP0DMW5 78 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 OPRK1P41145 380 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 DAPP51397 102 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 CATR1Q13166 79 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 MSMO1Q15800 293 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 RTL8BQ17RB0 113 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 RSPO1Q2MKA7 263 aaPredicted RBP1.71□□□□□ -2.14
CLK1-204ENST00000432425 FBXL19-AS1Q494R0 122 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 UBE2NLQ5JXB2 153 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 CLLU1OSQ5K130 101 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 AMMECR1LQ6DCA0 310 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 CEMP1Q6PRD7 247 aaPredicted RBP1.71□□□□□ -2.14
CLK1-204ENST00000432425 LCN15Q6UWW0 184 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 Q6ZS49 121 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 KTN1-AS1Q86SY8 53 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 LINC00596Q86U02 117 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 PRR15Q8IV56 129 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 ZNF664Q8N3J9 261 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 C3orf22Q8N5N4 141 aa1.71□□□□□ -2.14
CLK1-204ENST00000432425 DRAM1Q8N682 238 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms