RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SLC25A20O43772 301 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 CDS2O95674 445 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 IFNA16P05015 189 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 ATP5G1P05496 136 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 FBP1P09467 338 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 C8orf88P0DMB2 117 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 CDK2P24941 298 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 OR1E2P47887 323 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 CDK9P50750 372 aaKnown RBP1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 TMEM33P57088 247 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 DAD1P61803 113 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 BSPH1Q075Z2 132 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 TMED2Q15363 201 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 TAF1AQ15573 450 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 SLC36A2Q495M3 483 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 SMARCD3Q6STE5 483 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 SCGB1D4Q6XE38 83 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 ZNF550Q7Z398 422 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 GLT6D1Q7Z4J2 308 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 PLCZ1Q86YW0 608 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 OR10P1Q8NGE3 313 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 OR10D3Q8NH80 312 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 SKA2Q8WVK7 121 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 ASB13Q8WXK3 278 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 OR5P3Q8WZ94 311 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 HIST1H2BAQ96A08 127 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 PACRGQ96M98 296 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 PPP1R2P1Q96PQ5 205 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 OR7D2Q96RA2 312 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 DHRS9Q9BPW9 319 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 DCUN1D5Q9BTE7 237 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 PCBD2Q9H0N5 130 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 MS4A6AQ9H2W1 248 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 C16orf95Q9H693 158 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 SPANXB1Q9NS25 103 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 KCNIP2Q9NS61 270 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 ZNHIT6Q9NWK9 470 aaKnown RBP1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 VPREB3Q9UKI3 123 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 CARHSP1Q9Y2V2 147 aaKnown RBP1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 MMACHCQ9Y4U1 282 aa1.44□□□□□ -2.18
HMGB1P27-201ENST00000431429 TENM3Q9P273 2699 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 MPDZO75970 2070 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 VWFP04275 2813 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 FREM1Q5H8C1 2179 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 LCE6AA0A183 80 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 LOC285095A0A1B0GVY8 99 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 CLPSL1A2RUU4 121 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 SYNGR2O43760 224 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 ARL6IP5O75915 188 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 MSMBP08118 114 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 PIRTP0C851 137 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 OR12D1P0DN82 309 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 CCL3P10147 92 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 CASP1P29466 404 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 SNRPD2P62316 118 aaKnown RBP1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 EMX1Q04741 257 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 COTL1Q14019 142 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 PDK2Q15119 407 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 ZNF791Q3KP31 576 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 PYDC2Q56P42 97 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 LCN8Q6JVE9 175 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 BRD3OSQ6XYD6 125 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 SDIM1Q6ZPB5 146 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 PHF13Q86YI8 300 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 OR4S1Q8NGB4 309 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 OR10D4PQ8NGN7 298 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 JOSD2Q8TAC2 188 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 ZCCHC13Q8WW36 166 aaKnown RBP1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 IMP4Q96G21 291 aaKnown RBP1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 MCEEQ96PE7 176 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 OR8B2Q96RD0 313 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 SNRNP25Q9BV90 132 aaKnown RBP1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 HIGD2AQ9BW72 106 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 C11orf1Q9H5F2 150 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 RNF122Q9H9V4 155 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 GLS2Q9UI32 602 aa1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.43□□□□□ -2.18
HMGB1P27-201ENST00000431429 SPTBP11277 2137 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 ROS1P08922 2347 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 A0A0A6YYH2 397 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 A6NJ64 397 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 C17orf98A8MV24 154 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 B4DEV8 164 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 KCNK1O00180 336 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 ZNF189O75820 626 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 ATP6V1G2O95670 118 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 HLA-DQB2P05538 268 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 TPM3P06753 285 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 LINC00614P0C842 121 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 COX5BP10606 129 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 CFL1P23528 166 aaKnown RBP1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 PEBP1P30086 187 aaKnown RBP1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 SLCO1A2P46721 670 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 DAPP51397 102 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 IDH3GP51553 393 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 KRTAP10-1P60331 282 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 GABARAPL2P60520 117 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 TPM4P67936 248 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 PSPHP78330 225 aa1.42□□□□□ -2.18
HMGB1P27-201ENST00000431429 BTG2P78543 158 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms