RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 SSNA1O43805 119 aa12.87□□□□□ -0.35
UBE3D-204ENST00000430071 MBPP02686 304 aaPredicted RBP12.87□□□□□ -0.35
UBE3D-204ENST00000430071 CSN3P07498 182 aa12.87□□□□□ -0.35
UBE3D-204ENST00000430071 EDN2P20800 178 aa12.87□□□□□ -0.35
UBE3D-204ENST00000430071 ZP3P21754 424 aa12.87□□□□□ -0.35
UBE3D-204ENST00000430071 SUB1P53999 127 aaKnown RBP eCLIP12.87□□□□□ -0.35
UBE3D-204ENST00000430071 C2orf83Q53S99 150 aa12.87□□□□□ -0.35
UBE3D-204ENST00000430071 GSG1LQ6UXU4 331 aa12.87□□□□□ -0.35
UBE3D-204ENST00000430071 SLC24A4Q8NFF2 622 aa12.87□□□□□ -0.35
UBE3D-204ENST00000430071 ZNF502Q8TBZ5 544 aa12.87□□□□□ -0.35
UBE3D-204ENST00000430071 VN1R17PQ8TDU5 208 aa12.87□□□□□ -0.35
UBE3D-204ENST00000430071 C2orf50Q96LR7 162 aa12.87□□□□□ -0.35
UBE3D-204ENST00000430071 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.86□□□□□ -0.35
UBE3D-204ENST00000430071 WRBO00258 174 aa12.86□□□□□ -0.35
UBE3D-204ENST00000430071 MED6O75586 246 aa12.86□□□□□ -0.35
UBE3D-204ENST00000430071 SCGB1D2O95969 90 aa12.86□□□□□ -0.35
UBE3D-204ENST00000430071 IGHV3-48P01763 117 aa12.86□□□□□ -0.35
UBE3D-204ENST00000430071 FRMD6-AS1P0C7T7 363 aa12.86□□□□□ -0.35
UBE3D-204ENST00000430071 NHLRC4P0CG21 123 aaPredicted RBP12.86□□□□□ -0.35
UBE3D-204ENST00000430071 NPY1RP25929 384 aa12.86□□□□□ -0.35
UBE3D-204ENST00000430071 IL15RAQ13261 267 aa12.86□□□□□ -0.35
UBE3D-204ENST00000430071 ADAMTSL5Q6ZMM2 481 aa12.86□□□□□ -0.35
UBE3D-204ENST00000430071 OR9G4Q8NGQ1 327 aa12.86□□□□□ -0.35
UBE3D-204ENST00000430071 SCARB1Q8WTV0 552 aa12.86□□□□□ -0.35
UBE3D-204ENST00000430071 EEF1AKMT3Q96AZ1 226 aa12.86□□□□□ -0.35
UBE3D-204ENST00000430071 PINX1Q96BK5 328 aaKnown RBP12.86□□□□□ -0.35
UBE3D-204ENST00000430071 CXorf58Q96LI9 332 aa12.86□□□□□ -0.35
UBE3D-204ENST00000430071 ELOVL1Q9BW60 279 aa12.86□□□□□ -0.35
UBE3D-204ENST00000430071 PPP5D1E7EU14 171 aa12.85□□□□□ -0.35
UBE3D-204ENST00000430071 TMEM50AO95807 157 aa12.85□□□□□ -0.35
UBE3D-204ENST00000430071 MT-CO2P00403 227 aa12.85□□□□□ -0.35
UBE3D-204ENST00000430071 IFNA10P01566 189 aa12.85□□□□□ -0.35
UBE3D-204ENST00000430071 CLEC19AQ6UXS0 136 aa12.85□□□□□ -0.35
UBE3D-204ENST00000430071 FNDC4Q9H6D8 234 aaPredicted RBP12.85□□□□□ -0.35
UBE3D-204ENST00000430071 RCL1Q9Y2P8 373 aaKnown RBP12.85□□□□□ -0.35
UBE3D-204ENST00000430071 TRBV7-1A0A0A6YYK4 115 aa12.84□□□□□ -0.35
UBE3D-204ENST00000430071 C15orf62A8K5M9 175 aa12.84□□□□□ -0.35
UBE3D-204ENST00000430071 F8W735 103 aaPredicted RBP12.84□□□□□ -0.35
UBE3D-204ENST00000430071 SSSCA1O60232 199 aa12.84□□□□□ -0.35
UBE3D-204ENST00000430071 PAX9P55771 341 aa12.84□□□□□ -0.35
UBE3D-204ENST00000430071 H2BFSP57053 126 aa12.84□□□□□ -0.35
UBE3D-204ENST00000430071 RPEL1Q2QD12 228 aa12.84□□□□□ -0.35
UBE3D-204ENST00000430071 WDR89Q96FK6 387 aaPredicted RBP12.84□□□□□ -0.35
UBE3D-204ENST00000430071 CIB3Q96Q77 187 aaPredicted RBP12.84□□□□□ -0.35
UBE3D-204ENST00000430071 C21orf62Q9NYP8 219 aa12.84□□□□□ -0.35
UBE3D-204ENST00000430071 MGAT4CQ9UBM8 478 aa12.84□□□□□ -0.35
UBE3D-204ENST00000430071 SELENOKQ9Y6D0 94 aa12.84□□□□□ -0.35
UBE3D-204ENST00000430071 U3KQ87 197 aa12.84□□□□□ -0.35
UBE3D-204ENST00000430071 H3BP45 60 aa12.83□□□□□ -0.36
UBE3D-204ENST00000430071 GPR183P32249 361 aa12.83□□□□□ -0.36
UBE3D-204ENST00000430071 MLANAQ16655 118 aa12.83□□□□□ -0.36
UBE3D-204ENST00000430071 RNASEH2CQ8TDP1 164 aaKnown RBP12.83□□□□□ -0.36
UBE3D-204ENST00000430071 K7EPK0 472 aa12.82□□□□□ -0.36
UBE3D-204ENST00000430071 CORTO00230 105 aa12.82□□□□□ -0.36
UBE3D-204ENST00000430071 CLEC3BP05452 202 aa12.82□□□□□ -0.36
UBE3D-204ENST00000430071 RAB32Q13637 225 aa12.82□□□□□ -0.36
UBE3D-204ENST00000430071 ZC4H2Q9NQZ6 224 aa12.82□□□□□ -0.36
UBE3D-204ENST00000430071 MRPL36Q9P0J6 103 aaKnown RBP12.82□□□□□ -0.36
UBE3D-204ENST00000430071 LSM5Q9Y4Y9 91 aaKnown RBP12.82□□□□□ -0.36
UBE3D-204ENST00000430071 OR2T8A6NH00 312 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 IGHV4-30-4P0DP06 118 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 CXCL3P19876 107 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 ARL3P36405 182 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 OPRK1P41145 380 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 ATP5IP56385 69 aaPredicted RBP12.81□□□□□ -0.36
UBE3D-204ENST00000430071 FAM209BQ5JX69 171 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 SPANXN5Q5MJ07 72 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 NOXA1Q86UR1 476 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 UBAC2Q8NBM4 344 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 SMIM8Q96KF7 97 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 RAB40CQ96S21 281 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 C11orf1Q9H5F2 150 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 PSENENQ9NZ42 101 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 RYR3Q15413 4870 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 OR2C1O95371 312 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 IFNA4P05014 189 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 MFAP4P55083 255 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 FCN2Q15485 313 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 Q56UQ5 140 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 OR11H7Q8NGC8 314 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 RCHY1Q96PM5 261 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 CHRDL1Q9BU40 450 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 NMES1Q9C002 83 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 MED28Q9H204 178 aa12.81□□□□□ -0.36
UBE3D-204ENST00000430071 PAIP2BQ9ULR5 123 aaKnown RBP12.81□□□□□ -0.36
UBE3D-204ENST00000430071 STRAPQ9Y3F4 350 aaKnown RBP12.81□□□□□ -0.36
UBE3D-204ENST00000430071 TGOLN2O43493 480 aa12.8□□□□□ -0.36
UBE3D-204ENST00000430071 GGCTO75223 188 aaKnown RBP12.8□□□□□ -0.36
UBE3D-204ENST00000430071 FCGR2BP31994 310 aaPredicted RBP12.8□□□□□ -0.36
UBE3D-204ENST00000430071 ADMP35318 185 aa12.8□□□□□ -0.36
UBE3D-204ENST00000430071 TAS2R30P59541 319 aa12.8□□□□□ -0.36
UBE3D-204ENST00000430071 S100A10P60903 97 aa12.8□□□□□ -0.36
UBE3D-204ENST00000430071 BSCL2Q96G97 398 aaPredicted RBP12.8□□□□□ -0.36
UBE3D-204ENST00000430071 ATP6V0BQ99437 205 aa12.8□□□□□ -0.36
UBE3D-204ENST00000430071 TXN2Q99757 166 aa12.8□□□□□ -0.36
UBE3D-204ENST00000430071 C19orf73Q9NVV2 129 aa12.8□□□□□ -0.36
UBE3D-204ENST00000430071 PRSS46E5RG02 174 aa12.79□□□□□ -0.36
UBE3D-204ENST00000430071 CTSGP08311 255 aa12.79□□□□□ -0.36
UBE3D-204ENST00000430071 RAB11AP62491 216 aa12.79□□□□□ -0.36
UBE3D-204ENST00000430071 RPP30P78346 268 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms