RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MRPL16Q9NX20 251 aaKnown RBP13.14□□□□□ -0.31
C9orf3-206ENST00000428313 A0A1W2PPC4 97 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 PEX7O00628 323 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 NANOS1Q8WY41 292 aaKnown RBP13.13□□□□□ -0.31
C9orf3-206ENST00000428313 SLC25A33Q9BSK2 321 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 TMUB1Q9BVT8 246 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 KNL1Q8NG31 2342 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 ADAMTS20P59510 1910 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 A8MWL6 223 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 OR1C1Q15619 314 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 LTC4SQ16873 150 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 ASPHD1Q5U4P2 390 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 PLPPR2Q96GM1 343 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 LINC00479Q96M42 142 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 GFRA4Q9GZZ7 299 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 RPP21Q9H633 154 aaKnown RBP13.13□□□□□ -0.31
C9orf3-206ENST00000428313 POLDIP2Q9Y2S7 368 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 GON4LQ3T8J9 2241 aa13.13□□□□□ -0.31
C9orf3-206ENST00000428313 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.12□□□□□ -0.31
C9orf3-206ENST00000428313 CT45A6P0DMU7 189 aa13.12□□□□□ -0.31
C9orf3-206ENST00000428313 CT45A5P0DMU8 189 aa13.12□□□□□ -0.31
C9orf3-206ENST00000428313 CT45A7P0DMV0 189 aa13.12□□□□□ -0.31
C9orf3-206ENST00000428313 CSN1S1P47710 185 aa13.12□□□□□ -0.31
C9orf3-206ENST00000428313 CFHR1Q03591 330 aa13.12□□□□□ -0.31
C9orf3-206ENST00000428313 CT45A1Q5HYN5 189 aa13.12□□□□□ -0.31
C9orf3-206ENST00000428313 CT45A3Q8NHU0 189 aa13.12□□□□□ -0.31
C9orf3-206ENST00000428313 IGFLR1Q9H665 355 aa13.12□□□□□ -0.31
C9orf3-206ENST00000428313 IGHV1OR21-1A0A087WYE8 117 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 LOC102723996A0A087X1L8 192 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 C19orf67A6NJJ6 358 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 OR11H12B2RN74 326 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 MGST3O14880 152 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 KLF7O75840 302 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-206ENST00000428313 FCGR2BP31994 310 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-206ENST00000428313 FOXF2Q12947 444 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 LGALS9BQ3B8N2 356 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 LGALS9CQ6DKI2 356 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 ZADH2Q8N4Q0 377 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 OR11H1Q8NG94 326 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 OR11H2Q8NH07 326 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 OCIAD1Q9NX40 245 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 INSIG2Q9Y5U4 225 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 FCGR3BO75015 233 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 NCR2O95944 276 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 CCL2P13500 99 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 LINC00205P59089 165 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 FAM53AQ6NSI3 398 aaPredicted RBP13.11□□□□□ -0.31
C9orf3-206ENST00000428313 ZNF329Q86UD4 541 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 OR10D3Q8NH80 312 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 Q8TCH9 128 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 GTSF1Q8WW33 167 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 PRSS22Q9GZN4 317 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 AP5S1Q9NUS5 200 aa13.11□□□□□ -0.31
C9orf3-206ENST00000428313 CHEK1O14757 476 aa13.1□□□□□ -0.31
C9orf3-206ENST00000428313 UBE2L3P68036 154 aaKnown RBP13.1□□□□□ -0.31
C9orf3-206ENST00000428313 SPAG8Q99932 426 aaPredicted RBP13.1□□□□□ -0.31
C9orf3-206ENST00000428313 RTL8AQ9BWD3 113 aa13.1□□□□□ -0.31
C9orf3-206ENST00000428313 PROK2Q9HC23 129 aa13.1□□□□□ -0.31
C9orf3-206ENST00000428313 F5P12259 2224 aa13.1□□□□□ -0.31
C9orf3-206ENST00000428313 LAMA2P24043 3122 aaKnown RBP13.1□□□□□ -0.31
C9orf3-206ENST00000428313 DUX1O43812 170 aa13.1□□□□□ -0.31
C9orf3-206ENST00000428313 CD24P25063 80 aa13.1□□□□□ -0.31
C9orf3-206ENST00000428313 LTBRP36941 435 aa13.1□□□□□ -0.31
C9orf3-206ENST00000428313 RBPMS2Q6ZRY4 209 aaKnown RBP13.1□□□□□ -0.31
C9orf3-206ENST00000428313 RPS19BP1Q86WX3 136 aaKnown RBP13.1□□□□□ -0.31
C9orf3-206ENST00000428313 FAM167A-AS1Q96KT0 104 aa13.1□□□□□ -0.31
C9orf3-206ENST00000428313 C15orf61A6NNL5 157 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 SPINK2P20155 84 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 KIR2DL2P43627 348 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-206ENST00000428313 ZNF138P52744 262 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 B3GALT5-AS1P59052 145 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 SLC25A2Q9BXI2 301 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 PRRG4Q9BZD6 226 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 TMEM140Q9NV12 185 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 ZNF492Q9P255 531 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 CYC1P08574 325 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 CCL3P10147 92 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 DEFB133Q30KQ1 61 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 PPP1R32Q7Z5V6 425 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 GGNQ86UU5 652 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 ZNF418Q8TF45 676 aaPredicted RBP13.09□□□□□ -0.31
C9orf3-206ENST00000428313 ENY2Q9NPA8 101 aa13.09□□□□□ -0.31
C9orf3-206ENST00000428313 C5orf42Q9H799 3197 aa13.08□□□□□ -0.31
C9orf3-206ENST00000428313 TRAV3A0A0B4J244 114 aa13.08□□□□□ -0.32
C9orf3-206ENST00000428313 A0A1W2PRD5 423 aa13.08□□□□□ -0.32
C9orf3-206ENST00000428313 A0A1W2PRF3 423 aa13.08□□□□□ -0.32
C9orf3-206ENST00000428313 A0A1W2PRM7 423 aa13.08□□□□□ -0.32
C9orf3-206ENST00000428313 HIGD1BQ9P298 99 aa13.08□□□□□ -0.32
C9orf3-206ENST00000428313 CXCL13O43927 109 aa13.08□□□□□ -0.32
C9orf3-206ENST00000428313 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.32
C9orf3-206ENST00000428313 PGLYRP4Q96LB8 373 aa13.08□□□□□ -0.32
C9orf3-206ENST00000428313 FOXA2Q9Y261 457 aaPredicted RBP13.08□□□□□ -0.32
C9orf3-206ENST00000428313 KLRC4-KLRK1H3BQV0 150 aa13.07□□□□□ -0.32
C9orf3-206ENST00000428313 HAX1O00165 279 aa13.07□□□□□ -0.32
C9orf3-206ENST00000428313 PSPNO60542 156 aa13.07□□□□□ -0.32
C9orf3-206ENST00000428313 CER1O95813 267 aa13.07□□□□□ -0.32
C9orf3-206ENST00000428313 APOHP02749 345 aaPredicted RBP13.07□□□□□ -0.32
C9orf3-206ENST00000428313 KIR2DS2P43631 304 aa13.07□□□□□ -0.32
C9orf3-206ENST00000428313 HSPE1P61604 102 aaKnown RBP13.07□□□□□ -0.32
C9orf3-206ENST00000428313 WFDC2Q14508 124 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms