RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 OR5H6Q8NGV6 325 aa10.49□□□□□ -0.73
PDAP1-202ENST00000426447 FAM210BQ96KR6 192 aa10.49□□□□□ -0.73
PDAP1-202ENST00000426447 A0A0A6YYH2 397 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 A6NJ64 397 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 SCGB2A1O75556 95 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 CDK2AP2O75956 126 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 PMP2P02689 132 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 CRYBB3P26998 211 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 MXD1Q05195 221 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 KCTD21Q4G0X4 260 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 SPINK9Q5DT21 86 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 IDNKQ5T6J7 187 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 OR6F1Q8NGZ6 308 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 DCANP1Q8TF63 244 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 SLC25A38Q96DW6 304 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 BLOC1S6Q9UL45 172 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 SSR3Q9UNL2 185 aa10.48□□□□□ -0.73
PDAP1-202ENST00000426447 TMEM189A5PLL7 270 aa10.47□□□□□ -0.73
PDAP1-202ENST00000426447 HELTA6NFD8 242 aa10.47□□□□□ -0.73
PDAP1-202ENST00000426447 HTN3P15516 51 aa10.47□□□□□ -0.73
PDAP1-202ENST00000426447 AP2S1P53680 142 aaPredicted RBP10.47□□□□□ -0.73
PDAP1-202ENST00000426447 SUB1P53999 127 aaKnown RBP eCLIP10.47□□□□□ -0.73
PDAP1-202ENST00000426447 SCAND1P57086 179 aa10.47□□□□□ -0.73
PDAP1-202ENST00000426447 PHLDA2Q53GA4 152 aa10.47□□□□□ -0.73
PDAP1-202ENST00000426447 OR5H2Q8NGV7 314 aa10.47□□□□□ -0.73
PDAP1-202ENST00000426447 SEC22AQ96IW7 307 aa10.47□□□□□ -0.73
PDAP1-202ENST00000426447 IGHV3OR16-12A0A075B7B8 117 aa10.46□□□□□ -0.73
PDAP1-202ENST00000426447 PSMB9P28065 219 aa10.46□□□□□ -0.73
PDAP1-202ENST00000426447 SDC2P34741 201 aa10.46□□□□□ -0.73
PDAP1-202ENST00000426447 SNRPD3P62318 126 aaKnown RBP10.46□□□□□ -0.73
PDAP1-202ENST00000426447 CORTO00230 105 aa10.45□□□□□ -0.74
PDAP1-202ENST00000426447 CLN5O75503 358 aa10.45□□□□□ -0.74
PDAP1-202ENST00000426447 CLEC2LP0C7M8 214 aa10.45□□□□□ -0.74
PDAP1-202ENST00000426447 LPCAT3Q6P1A2 487 aa10.45□□□□□ -0.74
PDAP1-202ENST00000426447 TBC1D26Q86UD7 250 aa10.45□□□□□ -0.74
PDAP1-202ENST00000426447 SLC35G3Q8N808 338 aa10.45□□□□□ -0.74
PDAP1-202ENST00000426447 MRGPRFQ96AM1 343 aa10.45□□□□□ -0.74
PDAP1-202ENST00000426447 NIPSNAP3BQ9BS92 247 aa10.45□□□□□ -0.74
PDAP1-202ENST00000426447 RNF167Q9H6Y7 350 aa10.45□□□□□ -0.74
PDAP1-202ENST00000426447 FAM212BQ9NTI7 297 aaPredicted RBP10.45□□□□□ -0.74
PDAP1-202ENST00000426447 TMED3Q9Y3Q3 217 aa10.45□□□□□ -0.74
PDAP1-202ENST00000426447 AGRNO00468 2067 aa10.45□□□□□ -0.74
PDAP1-202ENST00000426447 SMIM9A6NGZ8 99 aa10.44□□□□□ -0.74
PDAP1-202ENST00000426447 OPRK1P41145 380 aa10.44□□□□□ -0.74
PDAP1-202ENST00000426447 TAS2R46P59540 309 aa10.44□□□□□ -0.74
PDAP1-202ENST00000426447 TSPAN5P62079 268 aa10.44□□□□□ -0.74
PDAP1-202ENST00000426447 TNP2Q05952 138 aa10.44□□□□□ -0.74
PDAP1-202ENST00000426447 S100A16Q96FQ6 103 aaKnown RBP10.44□□□□□ -0.74
PDAP1-202ENST00000426447 CNBD2Q96M20 576 aa10.44□□□□□ -0.74
PDAP1-202ENST00000426447 NEU1Q99519 415 aa10.44□□□□□ -0.74
PDAP1-202ENST00000426447 PDCD10Q9BUL8 212 aa10.44□□□□□ -0.74
PDAP1-202ENST00000426447 FXYD6Q9H0Q3 95 aa10.44□□□□□ -0.74
PDAP1-202ENST00000426447 TRAV30A0A087WSZ9 112 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 TEX48A0A1B0GUV7 120 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 H3BMM0 161 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 IGKV1-39P01597 117 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 IGKV1D-39P04432 117 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 MLANAQ16655 118 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 IZUMO4Q1ZYL8 232 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 TIGITQ495A1 244 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 FAM222AQ5U5X8 452 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 ZNF705AQ6ZN79 300 aaPredicted RBP10.43□□□□□ -0.74
PDAP1-202ENST00000426447 Q8N1X5 172 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 OR4X1Q8NH49 305 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 NRG4Q8WWG1 115 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 ATG101Q9BSB4 218 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 ENY2Q9NPA8 101 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 RFNGQ9Y644 331 aa10.43□□□□□ -0.74
PDAP1-202ENST00000426447 IGKV3-20P01619 116 aa10.42□□□□□ -0.74
PDAP1-202ENST00000426447 HNRNPCP07910 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
PDAP1-202ENST00000426447 ETV6P41212 452 aa10.42□□□□□ -0.74
PDAP1-202ENST00000426447 FXYD7P58549 80 aa10.42□□□□□ -0.74
PDAP1-202ENST00000426447 C16orf54Q6UWD8 224 aa10.42□□□□□ -0.74
PDAP1-202ENST00000426447 Q8WTZ3 238 aa10.42□□□□□ -0.74
PDAP1-202ENST00000426447 SCRT2Q9NQ03 307 aa10.42□□□□□ -0.74
PDAP1-202ENST00000426447 MRPL36Q9P0J6 103 aaKnown RBP10.42□□□□□ -0.74
PDAP1-202ENST00000426447 DKK2Q9UBU2 259 aa10.42□□□□□ -0.74
PDAP1-202ENST00000426447 ZNF705FA8MVS1 300 aaPredicted RBP10.41□□□□□ -0.74
PDAP1-202ENST00000426447 FAM90A26D6RGX4 464 aa10.41□□□□□ -0.74
PDAP1-202ENST00000426447 ZNF705DP0CH99 300 aaPredicted RBP10.41□□□□□ -0.74
PDAP1-202ENST00000426447 ZNF705BP0CI00 300 aaPredicted RBP10.41□□□□□ -0.74
PDAP1-202ENST00000426447 RNASE2P10153 161 aaKnown RBP10.41□□□□□ -0.74
PDAP1-202ENST00000426447 HLA-DMAP28067 261 aa10.41□□□□□ -0.74
PDAP1-202ENST00000426447 HRH1P35367 487 aa10.41□□□□□ -0.74
PDAP1-202ENST00000426447 HOXA1P49639 335 aaPredicted RBP10.41□□□□□ -0.74
PDAP1-202ENST00000426447 TMEM88Q6PEY1 159 aa10.41□□□□□ -0.74
PDAP1-202ENST00000426447 GLMPQ8WWB7 406 aa10.41□□□□□ -0.74
PDAP1-202ENST00000426447 FNDC4Q9H6D8 234 aaPredicted RBP10.41□□□□□ -0.74
PDAP1-202ENST00000426447 U3KQE9 123 aa10.41□□□□□ -0.74
PDAP1-202ENST00000426447 LOC100506127A0A0U1RQW1 187 aa10.4□□□□□ -0.74
PDAP1-202ENST00000426447 INS-IGF2F8WCM5 200 aa10.4□□□□□ -0.74
PDAP1-202ENST00000426447 IGKV1-17P01599 117 aa10.4□□□□□ -0.74
PDAP1-202ENST00000426447 HLA-DRB4P13762 266 aa10.4□□□□□ -0.74
PDAP1-202ENST00000426447 FAM3BP58499 235 aaPredicted RBP10.4□□□□□ -0.74
PDAP1-202ENST00000426447 TAS2R20P59543 309 aa10.4□□□□□ -0.74
PDAP1-202ENST00000426447 SEPSECSQ9HD40 501 aaKnown RBP10.4□□□□□ -0.74
PDAP1-202ENST00000426447 NRN1Q9NPD7 142 aa10.4□□□□□ -0.74
PDAP1-202ENST00000426447 HLA-DRB4X5D2U9 266 aa10.4□□□□□ -0.74
PDAP1-202ENST00000426447 HSPG2P98160 4391 aa10.4□□□□□ -0.74
PDAP1-202ENST00000426447 A0A0B4J293 547 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms