RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 ZNF414Q96IQ9 312 aa4.4□□□□□ -1.71
HERPUD2-204ENST00000426180 UBE2E2Q96LR5 201 aa4.4□□□□□ -1.71
HERPUD2-204ENST00000426180 C2orf50Q96LR7 162 aa4.4□□□□□ -1.71
HERPUD2-204ENST00000426180 CCDC140Q96MF4 163 aa4.4□□□□□ -1.71
HERPUD2-204ENST00000426180 C11orf1Q9H5F2 150 aa4.4□□□□□ -1.71
HERPUD2-204ENST00000426180 FNDC4Q9H6D8 234 aaPredicted RBP4.4□□□□□ -1.71
HERPUD2-204ENST00000426180 SLA2Q9H6Q3 261 aa4.4□□□□□ -1.71
HERPUD2-204ENST00000426180 ZFP57Q9NU63 452 aa4.4□□□□□ -1.71
HERPUD2-204ENST00000426180 MGAT4CQ9UBM8 478 aa4.4□□□□□ -1.71
HERPUD2-204ENST00000426180 LSM5Q9Y4Y9 91 aaKnown RBP4.4□□□□□ -1.71
HERPUD2-204ENST00000426180 TET2Q6N021 2002 aaPredicted RBP4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 PKD1L1Q8TDX9 2849 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 PIGBOS1A0A0B4J2F0 54 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 FAM223BA6NKX1 122 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 H0YIZ8 118 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 BMPR1BO00238 502 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 MT-CO2P00403 227 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 IFNA10P01566 189 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 HIST1H1BP16401 226 aaKnown RBP4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 NPY1RP25929 384 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 SNCAP37840 140 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 HTR2BP41595 481 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 SLURP1P55000 103 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 S100A10P60903 97 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 RUNX1Q01196 453 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 C2orf83Q53S99 150 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 Q5BKY6 102 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 ZNF343Q6P1L6 599 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 CLEC19AQ6UXS0 136 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 HAPLN4Q86UW8 402 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 FAM223AQ8IWN6 122 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 SLC24A4Q8NFF2 622 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 OR11H1Q8NG94 326 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 OR1N2Q8NGR9 330 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 SCARB1Q8WTV0 552 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 CHAC2Q8WUX2 184 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 PINX1Q96BK5 328 aaKnown RBP4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 USMG5Q96IX5 58 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 SMIM8Q96KF7 97 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 MED28Q9H204 178 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 HIPK2Q9H2X6 1198 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 ZC4H2Q9NQZ6 224 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 OR5AC2Q9NZP5 309 aa4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 PAIP2BQ9ULR5 123 aaKnown RBP4.39□□□□□ -1.71
HERPUD2-204ENST00000426180 IGHV3-35A0A0C4DH35 117 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 A0A0G2JLM5 398 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 A0A1B0GVG6 124 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 FAM24AA6NFZ4 105 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 OR2T8A6NH00 312 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 PMS2P5A8MQ11 134 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 PRSS46E5RG02 174 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 M0QZ24 198 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 CCL24O00175 119 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 MED6O75586 246 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 CLEC3BP05452 202 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 SUB1P53999 127 aaKnown RBP eCLIP4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 RRAS2P62070 204 aaPredicted RBP4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 ARL16Q0P5N6 197 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 FHL3Q13643 280 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 LRRC37A5PQ49AS3 106 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 SPANXN5Q5MJ07 72 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 UBAC2Q8NBM4 344 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 OR1L6Q8NGR2 347 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 VN1R17PQ8TDU5 208 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 DLX4Q92988 240 aaPredicted RBP4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 EEF1AKMT3Q96AZ1 226 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 BSCL2Q96G97 398 aaPredicted RBP4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 CHRDL1Q9BU40 450 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 RNF126Q9BV68 326 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 NMES1Q9C002 83 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 C21orf62Q9NYP8 219 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 PSENENQ9NZ42 101 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 PEF1Q9UBV8 284 aaKnown RBP4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 U3KQ87 197 aa4.38□□□□□ -1.71
HERPUD2-204ENST00000426180 hCG_2014768A0A024R1R8 64 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 IGHV3OR16-8A0A075B7F1 116 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 TRAV14DV4A0A0A6YYC5 116 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 TRBV7-1A0A0A6YYK4 115 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 IGSF23A1L1A6 192 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 LINC01619G3V211 115 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 G3V3Q6 166 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 SMLR1H3BR10 107 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 DEDDO75618 318 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 OR2C1O95371 312 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 HSPB1P04792 205 aaKnown RBP4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 IFNA4P05014 189 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 CTSGP08311 255 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 OR8U8P0C7N1 319 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 METTL15P1P0C7V9 234 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 EDN2P20800 178 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 HOXD3P31249 432 aaPredicted RBP4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 GPR183P32249 361 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 ARL3P36405 182 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 MYCNOSP40205 109 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 OPRK1P41145 380 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 MFAP4P55083 255 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 CD69Q07108 199 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 ZNF616Q08AN1 781 aa4.37□□□□□ -1.71
HERPUD2-204ENST00000426180 KLF5Q13887 457 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms