RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 RPA2P15927 270 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 SPNP16150 400 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 TBPP20226 339 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 PSMB6P28072 239 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 S100A5P33763 92 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 SNCAP37840 140 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 SUB1P53999 127 aaKnown RBP eCLIP4.28□□□□□ -1.72
LINC00458-201ENST00000423442 TAS2R19P59542 299 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 MRPS10P82664 201 aaKnown RBP4.28□□□□□ -1.72
LINC00458-201ENST00000423442 SSBP1Q04837 148 aaKnown RBP4.28□□□□□ -1.72
LINC00458-201ENST00000423442 EXOSC2Q13868 293 aaKnown RBP4.28□□□□□ -1.72
LINC00458-201ENST00000423442 IL18Q14116 193 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 MEF2DQ14814 521 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 SCGB2B2Q4G0G5 96 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 PHLDA2Q53GA4 152 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 THOC7Q6I9Y2 204 aaKnown RBP4.28□□□□□ -1.72
LINC00458-201ENST00000423442 LCN12Q6JVE5 192 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 PET117Q6UWS5 81 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 HAPLN4Q86UW8 402 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 CADM3Q8N126 398 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 CCDC71LQ8N9Z2 235 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 OR9G4Q8NGQ1 327 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 RNASE11Q8TAA1 199 aaKnown RBP4.28□□□□□ -1.72
LINC00458-201ENST00000423442 C5orf30Q96GV9 206 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 ZNF486Q96H40 463 aaPredicted RBP4.28□□□□□ -1.72
LINC00458-201ENST00000423442 SCGB3A2Q96PL1 93 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 ASCL2Q99929 193 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 BCL7BQ9BQE9 202 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 PDCD10Q9BUL8 212 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 TUBA4BQ9H853 241 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 PALMDQ9NP74 551 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 FAM212BQ9NTI7 297 aaPredicted RBP4.28□□□□□ -1.72
LINC00458-201ENST00000423442 COPZ2Q9P299 210 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 KLK11Q9UBX7 282 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 RSL24D1Q9UHA3 163 aaKnown RBP4.28□□□□□ -1.72
LINC00458-201ENST00000423442 OR51B2Q9Y5P1 312 aa4.28□□□□□ -1.72
LINC00458-201ENST00000423442 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.27□□□□□ -1.73
LINC00458-201ENST00000423442 A4D1N5 150 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 FABP12A6NFH5 140 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 DISC1C4P0D8 188 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 GABARAPH6UMI1 98 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 B3GALNT1O75752 331 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 S1PR2O95136 353 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 GABARAPO95166 117 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 RAB3DO95716 219 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 CD3DP04234 171 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 REG1AP05451 166 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 CRYGCP07315 174 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 PRSS2P07478 247 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 OR13C7P0DN81 318 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 G6PCP35575 357 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 BRWD1-AS2P59051 145 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 OR2B8PP59922 312 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 ERHP84090 104 aaKnown RBP4.27□□□□□ -1.73
LINC00458-201ENST00000423442 EIF4EBP1Q13541 118 aaPredicted RBP4.27□□□□□ -1.73
LINC00458-201ENST00000423442 POU2AF1Q16633 256 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 TRIM16LQ309B1 348 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 ANKRD55Q3KP44 614 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 PLET1Q6UQ28 207 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 CLEC19AQ6UXS0 136 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 TBC1D26Q86UD7 250 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 GPHB5Q86YW7 130 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 SGPP2Q8IWX5 399 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 ARRDC1Q8N5I2 433 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 TMEM229BQ8NBD8 167 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 OR5B3Q8NH48 314 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 OR52I2Q8NH67 350 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 DYNLRB2Q8TF09 96 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 RRNAD1Q96FB5 475 aaKnown RBP4.27□□□□□ -1.73
LINC00458-201ENST00000423442 C6orf62Q9GZU0 229 aaPredicted RBP4.27□□□□□ -1.73
LINC00458-201ENST00000423442 NAA50Q9GZZ1 169 aaKnown RBP4.27□□□□□ -1.73
LINC00458-201ENST00000423442 ENY2Q9NPA8 101 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 TECRQ9NZ01 308 aaKnown RBP4.27□□□□□ -1.73
LINC00458-201ENST00000423442 MTFP1Q9UDX5 166 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 CACFD1Q9UGQ2 172 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 C14orf166Q9Y224 244 aaKnown RBP4.27□□□□□ -1.73
LINC00458-201ENST00000423442 KCNIP3Q9Y2W7 256 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 STAB2Q8WWQ8 2551 aa4.27□□□□□ -1.73
LINC00458-201ENST00000423442 A0A0B4J293 547 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 PIGBOS1A0A0B4J2F0 54 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 C3orf85A0A1B0GTC6 90 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 CXorf65A6NEN9 183 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 SCGB2A1O75556 95 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 IFNA17P01571 189 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 IGLV1-51P01701 117 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 AREGP15514 252 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 PTBP1P26599 531 aaKnown RBP eCLIP4.26□□□□□ -1.73
LINC00458-201ENST00000423442 ALDH3B2P48448 385 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 INPP1P49441 399 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 AKR1C2P52895 323 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 PIGPP57054 158 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 AP3S2P59780 193 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 SPCS2Q15005 226 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 GUCA2BQ16661 112 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 MRGPRG-AS1Q2M3A8 158 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 C10orf55Q5SWW7 151 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 STEAP1BQ6NZ63 245 aa4.26□□□□□ -1.73
LINC00458-201ENST00000423442 RBPMS2Q6ZRY4 209 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms