RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ALMS1Q8TCU4 4167 aa11.39□□□□□ -0.59
USB1-202ENST00000423271 OR2T8A6NH00 312 aa11.39□□□□□ -0.59
USB1-202ENST00000423271 OR11H12B2RN74 326 aa11.39□□□□□ -0.59
USB1-202ENST00000423271 SCAF4O95104 1147 aaKnown RBP11.39□□□□□ -0.59
USB1-202ENST00000423271 DHRS2Q13268 280 aa11.39□□□□□ -0.59
USB1-202ENST00000423271 AARDQ4LEZ3 155 aa11.39□□□□□ -0.59
USB1-202ENST00000423271 C4orf46Q504U0 113 aa11.39□□□□□ -0.59
USB1-202ENST00000423271 LYG2Q86SG7 212 aa11.39□□□□□ -0.59
USB1-202ENST00000423271 LRTM2Q8N967 370 aa11.39□□□□□ -0.59
USB1-202ENST00000423271 PDCD10Q9BUL8 212 aa11.39□□□□□ -0.59
USB1-202ENST00000423271 ZNF436Q9C0F3 470 aaPredicted RBP11.39□□□□□ -0.59
USB1-202ENST00000423271 HIPK2Q9H2X6 1198 aa11.39□□□□□ -0.59
USB1-202ENST00000423271 PALMDQ9NP74 551 aa11.39□□□□□ -0.59
USB1-202ENST00000423271 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.39□□□□□ -0.59
USB1-202ENST00000423271 NUDT15Q9NV35 164 aa11.39□□□□□ -0.59
USB1-202ENST00000423271 DUXBA0A1W2PPF3 345 aa11.38□□□□□ -0.59
USB1-202ENST00000423271 F8W735 103 aaPredicted RBP11.38□□□□□ -0.59
USB1-202ENST00000423271 K7EIM0 57 aa11.38□□□□□ -0.59
USB1-202ENST00000423271 CYB5BO43169 146 aa11.38□□□□□ -0.59
USB1-202ENST00000423271 H2AFB2P0C5Z0 115 aa11.38□□□□□ -0.59
USB1-202ENST00000423271 C8orf88P0DMB2 117 aa11.38□□□□□ -0.59
USB1-202ENST00000423271 SULT1A3P0DMM9 295 aa11.38□□□□□ -0.59
USB1-202ENST00000423271 SULT1A4P0DMN0 295 aa11.38□□□□□ -0.59
USB1-202ENST00000423271 OR2C3Q8N628 320 aa11.38□□□□□ -0.59
USB1-202ENST00000423271 ENKURQ8TC29 256 aa11.38□□□□□ -0.59
USB1-202ENST00000423271 TMEM190Q8WZ59 177 aa11.38□□□□□ -0.59
USB1-202ENST00000423271 CHRDL1Q9BU40 450 aa11.38□□□□□ -0.59
USB1-202ENST00000423271 GAR1Q9NY12 217 aaKnown RBP11.38□□□□□ -0.59
USB1-202ENST00000423271 NXPH3O95157 252 aa11.37□□□□□ -0.59
USB1-202ENST00000423271 HOXB5P09067 269 aa11.37□□□□□ -0.59
USB1-202ENST00000423271 HOXA1P49639 335 aaPredicted RBP11.37□□□□□ -0.59
USB1-202ENST00000423271 SPCS3P61009 180 aa11.37□□□□□ -0.59
USB1-202ENST00000423271 SMCO1Q147U7 214 aa11.37□□□□□ -0.59
USB1-202ENST00000423271 SLC16A13Q7RTY0 426 aa11.37□□□□□ -0.59
USB1-202ENST00000423271 OR52B4Q8NGK2 314 aa11.37□□□□□ -0.59
USB1-202ENST00000423271 SCARB1Q8WTV0 552 aa11.37□□□□□ -0.59
USB1-202ENST00000423271 BSCL2Q96G97 398 aaPredicted RBP11.37□□□□□ -0.59
USB1-202ENST00000423271 C21orf62Q9NYP8 219 aa11.37□□□□□ -0.59
USB1-202ENST00000423271 UFC1Q9Y3C8 167 aa11.37□□□□□ -0.59
USB1-202ENST00000423271 IGHV3OR16-8A0A075B7F1 116 aa11.36□□□□□ -0.59
USB1-202ENST00000423271 PIGBOS1A0A0B4J2F0 54 aa11.36□□□□□ -0.59
USB1-202ENST00000423271 ADAP1O75689 374 aa11.36□□□□□ -0.59
USB1-202ENST00000423271 ADMP35318 185 aa11.36□□□□□ -0.59
USB1-202ENST00000423271 ELLP55199 621 aaPredicted RBP11.36□□□□□ -0.59
USB1-202ENST00000423271 ERHP84090 104 aaKnown RBP11.36□□□□□ -0.59
USB1-202ENST00000423271 GGNBP1Q5YKI7 109 aa11.36□□□□□ -0.59
USB1-202ENST00000423271 NRARPQ7Z6K4 114 aa11.36□□□□□ -0.59
USB1-202ENST00000423271 UBAC2Q8NBM4 344 aa11.36□□□□□ -0.59
USB1-202ENST00000423271 OR52E5Q8NH55 327 aa11.36□□□□□ -0.59
USB1-202ENST00000423271 COQ8AQ8NI60 647 aa11.36□□□□□ -0.59
USB1-202ENST00000423271 MARC2Q969Z3 335 aa11.36□□□□□ -0.59
USB1-202ENST00000423271 ZNF414Q96IQ9 312 aa11.36□□□□□ -0.59
USB1-202ENST00000423271 SEC22CQ9BRL7 303 aa11.36□□□□□ -0.59
USB1-202ENST00000423271 MRPL27Q9P0M9 148 aaKnown RBP11.36□□□□□ -0.59
USB1-202ENST00000423271 TMED3Q9Y3Q3 217 aa11.36□□□□□ -0.59
USB1-202ENST00000423271 A0A1B0GU03 582 aa11.35□□□□□ -0.59
USB1-202ENST00000423271 CEBPZOSA8MTT3 80 aa11.35□□□□□ -0.59
USB1-202ENST00000423271 INS-IGF2F8WCM5 200 aa11.35□□□□□ -0.59
USB1-202ENST00000423271 DEFA1P59665 94 aa11.35□□□□□ -0.59
USB1-202ENST00000423271 DEFA3P59666 94 aa11.35□□□□□ -0.59
USB1-202ENST00000423271 Q56UQ5 140 aa11.35□□□□□ -0.59
USB1-202ENST00000423271 ZNF114Q8NC26 417 aa11.35□□□□□ -0.59
USB1-202ENST00000423271 OR1P1Q8NH06 330 aa11.35□□□□□ -0.59
USB1-202ENST00000423271 OR1S1Q8NH92 325 aa11.35□□□□□ -0.59
USB1-202ENST00000423271 MITD1Q8WV92 249 aa11.35□□□□□ -0.59
USB1-202ENST00000423271 ENY2Q9NPA8 101 aa11.35□□□□□ -0.59
USB1-202ENST00000423271 TRAV25A0A0B4J276 109 aa11.34□□□□□ -0.59
USB1-202ENST00000423271 NDUFA4O00483 81 aa11.34□□□□□ -0.59
USB1-202ENST00000423271 ZNF207O43670 478 aaKnown RBP11.34□□□□□ -0.59
USB1-202ENST00000423271 PITX3O75364 302 aa11.34□□□□□ -0.59
USB1-202ENST00000423271 SLC25A6P12236 298 aa11.34□□□□□ -0.59
USB1-202ENST00000423271 TNFRSF9Q07011 255 aa11.34□□□□□ -0.59
USB1-202ENST00000423271 SPSB3Q6PJ21 355 aa11.34□□□□□ -0.59
USB1-202ENST00000423271 RBPMS2Q6ZRY4 209 aaKnown RBP11.34□□□□□ -0.59
USB1-202ENST00000423271 DUSP18Q8NEJ0 188 aa11.34□□□□□ -0.59
USB1-202ENST00000423271 OR1L6Q8NGR2 347 aa11.34□□□□□ -0.59
USB1-202ENST00000423271 MISP3Q96FF7 219 aa11.34□□□□□ -0.59
USB1-202ENST00000423271 C20orf24Q9BUV8 137 aa11.34□□□□□ -0.59
USB1-202ENST00000423271 DAZ1Q9NQZ3 744 aaKnown RBP11.34□□□□□ -0.59
USB1-202ENST00000423271 HSPB7Q9UBY9 170 aa11.34□□□□□ -0.59
USB1-202ENST00000423271 EPPK1P58107 5090 aaKnown RBP11.34□□□□□ -0.59
USB1-202ENST00000423271 I3L2K1 104 aa11.33□□□□□ -0.6
USB1-202ENST00000423271 RNASE2P10153 161 aaKnown RBP11.33□□□□□ -0.6
USB1-202ENST00000423271 SNCAP37840 140 aa11.33□□□□□ -0.6
USB1-202ENST00000423271 ZNF431Q8TF32 576 aaPredicted RBP11.33□□□□□ -0.6
USB1-202ENST00000423271 ATP6V0BQ99437 205 aa11.33□□□□□ -0.6
USB1-202ENST00000423271 RBKSQ9H477 322 aa11.33□□□□□ -0.6
USB1-202ENST00000423271 HEYLQ9NQ87 328 aaPredicted RBP11.33□□□□□ -0.6
USB1-202ENST00000423271 MPTX1A8MV57 137 aa11.32□□□□□ -0.6
USB1-202ENST00000423271 IGHV3-48P01763 117 aa11.32□□□□□ -0.6
USB1-202ENST00000423271 CTSGP08311 255 aa11.32□□□□□ -0.6
USB1-202ENST00000423271 BSXQ3C1V8 233 aa11.32□□□□□ -0.6
USB1-202ENST00000423271 SPAG8Q99932 426 aaPredicted RBP11.32□□□□□ -0.6
USB1-202ENST00000423271 GGTLC1Q9BX51 225 aa11.32□□□□□ -0.6
USB1-202ENST00000423271 CACFD1Q9UGQ2 172 aa11.32□□□□□ -0.6
USB1-202ENST00000423271 UBQLN2Q9UHD9 624 aa11.32□□□□□ -0.6
USB1-202ENST00000423271 TSPAN4O14817 238 aa11.31□□□□□ -0.6
USB1-202ENST00000423271 MT-CO2P00403 227 aa11.31□□□□□ -0.6
USB1-202ENST00000423271 IFNA21P01568 189 aa11.31□□□□□ -0.6
USB1-202ENST00000423271 IL5P05113 134 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms