RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 SAMD10Q9BYL1 202 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 ZNF355PQ9NSJ1 428 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 LINC00312Q9Y6C7 94 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 UTP20O75691 2785 aaKnown RBP10.81□□□□□ -0.68
MCF2L-213ENST00000421756 FLNCQ14315 2725 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 VSTM5A8MXK1 200 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 PRSS46E5RG02 174 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 RNASE2P10153 161 aaKnown RBP10.81□□□□□ -0.68
MCF2L-213ENST00000421756 NTF3P20783 257 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 KIR2DS2P43631 304 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 SSX2Q16385 188 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 BATFQ16520 125 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 TBR1Q16650 682 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 VWC2Q2TAL6 325 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 OR1L8Q8NGR8 309 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 ANAPC16Q96DE5 110 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 SLC25A33Q9BSK2 321 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 TUBG2Q9NRH3 451 aa10.81□□□□□ -0.68
MCF2L-213ENST00000421756 FOXA2Q9Y261 457 aaPredicted RBP10.81□□□□□ -0.68
MCF2L-213ENST00000421756 USP9XQ93008 2570 aaPredicted RBP10.8□□□□□ -0.68
MCF2L-213ENST00000421756 GGTLC3B5MD39 225 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 CFHR2P36980 270 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 TMEM183AQ8IXX5 376 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 LPAR2Q9HBW0 351 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 SSUH2Q9Y2M2 353 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 LSM4Q9Y4Z0 139 aaKnown RBP10.8□□□□□ -0.68
MCF2L-213ENST00000421756 INSIG2Q9Y5U4 225 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 LRRK2Q5S007 2527 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 PTPN13Q12923 2485 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 MPDU1O75352 247 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 IGHV3-23P01764 117 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 RBP4P02753 201 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 PMCHP20382 165 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 KLRD1Q13241 179 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 TIGITQ495A1 244 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 MMD2Q8IY49 270 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 FAM168AQ92567 244 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 ADTRPQ96IZ2 230 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 PRDM13Q9H4Q3 707 aa10.8□□□□□ -0.68
MCF2L-213ENST00000421756 ZNF835Q9Y2P0 537 aa10.79□□□□□ -0.68
MCF2L-213ENST00000421756 CD3EP07766 207 aa10.79□□□□□ -0.68
MCF2L-213ENST00000421756 LOXP28300 417 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-213ENST00000421756 MAS1LP35410 378 aa10.79□□□□□ -0.68
MCF2L-213ENST00000421756 GPR6P46095 362 aaPredicted RBP10.79□□□□□ -0.68
MCF2L-213ENST00000421756 MUC15Q8N387 334 aa10.79□□□□□ -0.68
MCF2L-213ENST00000421756 RAB9BQ9NP90 201 aa10.79□□□□□ -0.68
MCF2L-213ENST00000421756 TMEM242Q9NWH2 141 aa10.79□□□□□ -0.68
MCF2L-213ENST00000421756 TECRQ9NZ01 308 aaKnown RBP10.79□□□□□ -0.68
MCF2L-213ENST00000421756 SLC45A2Q9UMX9 530 aa10.79□□□□□ -0.68
MCF2L-213ENST00000421756 A0A1B0GV90 55 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 GZMBP10144 247 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 GATA4P43694 442 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 LYZP61626 148 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 TMEM144Q7Z5S9 345 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 OR4C13Q8NGP0 309 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 EAF1Q96JC9 268 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-213ENST00000421756 TPPP3Q9BW30 176 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 SSBP4Q9BWG4 385 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-213ENST00000421756 PARD6GQ9BYG4 376 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-213ENST00000421756 MRPL18Q9H0U6 180 aaKnown RBP10.78□□□□□ -0.68
MCF2L-213ENST00000421756 ZFHX3Q15911 3703 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 A0A1W2PPI3 338 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 TSTD3H0UI37 97 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 ZNF503Q96F45 646 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 VPS13CQ709C8 3753 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 NDUFS7O75251 213 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 HIST1H1BP16401 226 aaKnown RBP10.78□□□□□ -0.68
MCF2L-213ENST00000421756 CD69Q07108 199 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 LINC00305Q7Z4B0 112 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 FAM19A2Q8N3H0 131 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 OR52E5Q8NH55 327 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 MS4A10Q96PG2 267 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 ELOVL5Q9NYP7 299 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 ABCA12Q86UK0 2595 aa10.78□□□□□ -0.68
MCF2L-213ENST00000421756 TRAV8-1A0A0A6YYK1 113 aa10.77□□□□□ -0.68
MCF2L-213ENST00000421756 RNF224P0DH78 156 aa10.77□□□□□ -0.68
MCF2L-213ENST00000421756 KRTDAPP60985 99 aa10.77□□□□□ -0.68
MCF2L-213ENST00000421756 C10orf113Q5VZT2 155 aa10.77□□□□□ -0.68
MCF2L-213ENST00000421756 TOMM20LQ6UXN7 152 aa10.77□□□□□ -0.68
MCF2L-213ENST00000421756 ST6GALNAC3Q8NDV1 305 aa10.77□□□□□ -0.68
MCF2L-213ENST00000421756 FAM222BQ8WU58 562 aa10.77□□□□□ -0.68
MCF2L-213ENST00000421756 RPEQ96AT9 228 aa10.77□□□□□ -0.68
MCF2L-213ENST00000421756 ATG101Q9BSB4 218 aa10.77□□□□□ -0.68
MCF2L-213ENST00000421756 ELOA3CA0A087WX78 387 aaPredicted RBP10.77□□□□□ -0.69
MCF2L-213ENST00000421756 RPL29P47914 159 aaKnown RBP10.77□□□□□ -0.69
MCF2L-213ENST00000421756 TDGF1P3P51864 188 aa10.77□□□□□ -0.69
MCF2L-213ENST00000421756 TDRG1Q3Y452 100 aa10.77□□□□□ -0.69
MCF2L-213ENST00000421756 DNAJC4Q9NNZ3 241 aa10.77□□□□□ -0.69
MCF2L-213ENST00000421756 SLC25A5P05141 298 aaKnown RBP10.77□□□□□ -0.69
MCF2L-213ENST00000421756 CRISP2P16562 243 aa10.77□□□□□ -0.69
MCF2L-213ENST00000421756 LY6DQ14210 128 aa10.77□□□□□ -0.69
MCF2L-213ENST00000421756 ATOH7Q8N100 152 aa10.77□□□□□ -0.69
MCF2L-213ENST00000421756 TMEM18Q96B42 140 aa10.77□□□□□ -0.69
MCF2L-213ENST00000421756 PAXXQ9BUH6 204 aa10.77□□□□□ -0.69
MCF2L-213ENST00000421756 CBLN4Q9NTU7 201 aa10.77□□□□□ -0.69
MCF2L-213ENST00000421756 SHISA9B4DS77 424 aa10.76□□□□□ -0.69
MCF2L-213ENST00000421756 SERF1AO75920 110 aa10.76□□□□□ -0.69
MCF2L-213ENST00000421756 ZNF664Q8N3J9 261 aa10.76□□□□□ -0.69
MCF2L-213ENST00000421756 TNFRSF19Q9NS68 423 aa10.76□□□□□ -0.69
MCF2L-213ENST00000421756 WASHC3Q9Y3C0 194 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms